Gene signature driving invasive mucinous adenocarcinoma of the lung. (Q42293061)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28255028%20AND%20SRC:MED&resulttype=core&format=json

4 April 2020

title

Gene signature driving invasive mucinous adenocarcinoma of the lung (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28255028%20AND%20SRC:MED&resulttype=core&format=json

4 April 2020

1 reference

mucinous adenocarcinoma

1 reference

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28255028%20AND%20SRC:MED&resulttype=core&format=json

4 April 2020

Tomoshi Tsuchiya

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28255028%20AND%20SRC:MED&resulttype=core&format=json

4 April 2020

Yutaka Maeda

14

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28255028%20AND%20SRC:MED&resulttype=core&format=json

4 April 2020

author name string

Minzhe Guo

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28255028%20AND%20SRC:MED&resulttype=core&format=json

4 April 2020

Michael Meister

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28255028%20AND%20SRC:MED&resulttype=core&format=json

4 April 2020

Thomas Muley

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28255028%20AND%20SRC:MED&resulttype=core&format=json

4 April 2020

Takuya Fukazawa

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28255028%20AND%20SRC:MED&resulttype=core&format=json

4 April 2020

Rebekah Karns

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28255028%20AND%20SRC:MED&resulttype=core&format=json

4 April 2020

Arne Warth

8

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28255028%20AND%20SRC:MED&resulttype=core&format=json

4 April 2020

Iris M Fink-Baldauf

9

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28255028%20AND%20SRC:MED&resulttype=core&format=json

4 April 2020

Takeshi Nagayasu

10

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28255028%20AND%20SRC:MED&resulttype=core&format=json

4 April 2020

Yoshio Naomoto

11

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28255028%20AND%20SRC:MED&resulttype=core&format=json

4 April 2020

Yan Xu

12

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28255028%20AND%20SRC:MED&resulttype=core&format=json

4 April 2020

Marcus A Mall

13

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28255028%20AND%20SRC:MED&resulttype=core&format=json

4 April 2020

publication date

1 April 2017

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28255028%20AND%20SRC:MED&resulttype=core&format=json

4 April 2020

published in

EMBO Molecular Medicine

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28255028%20AND%20SRC:MED&resulttype=core&format=json

4 April 2020

volume

9

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28255028%20AND%20SRC:MED&resulttype=core&format=json

4 April 2020

page(s)

462-481

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28255028%20AND%20SRC:MED&resulttype=core&format=json

4 April 2020

issue

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28255028%20AND%20SRC:MED&resulttype=core&format=json

describes a project that uses

4 April 2020

DESeq2

object named as

DESeq2

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

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Co-occurring genomic alterations define major subsets of KRAS-mutant lung adenocarcinoma with distinct biology, immune profiles, and therapeutic vulnerabilities

26 October 2017

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Predictive correlates of response to the anti-PD-L1 antibody MPDL3280A in cancer patients

26 October 2017

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26 October 2017

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SPDEF inhibits prostate carcinogenesis by disrupting a positive feedback loop in regulation of the Foxm1 oncogene

26 October 2017

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Comprehensive molecular profiling of lung adenocarcinoma

26 October 2017

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Transcriptomic characterization of hepatocellular carcinoma with CTNNB1 mutation

26 October 2017

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Multiple cells-of-origin of mutant K-Ras-induced mouse lung adenocarcinoma.

26 October 2017

1 reference

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CD74-NRG1 fusions in lung adenocarcinoma

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5376761

Foxa3 induces goblet cell metaplasia and inhibits innate antiviral immunity

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5376761

Runx3 inactivation is a crucial early event in the development of lung adenocarcinoma

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5376761

Master regulators of FGFR2 signalling and breast cancer risk

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5376761

Mucins in pancreatic cancer and its microenvironment

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5376761

PDEF promotes luminal differentiation and acts as a survival factor for ER-positive breast cancer cells

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5376761

Nkx2-1 represses a latent gastric differentiation program in lung adenocarcinoma

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5376761

SPDEF functions as a colorectal tumor suppressor by inhibiting β-catenin activity.

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5376761

Kras(G12D) and Nkx2-1 haploinsufficiency induce mucinous adenocarcinoma of the lung

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5376761

MUC5B leads to aggressive behavior of breast cancer MCF7 cells.

26 October 2017

1 reference

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CFTR, mucins, and mucus obstruction in cystic fibrosis

26 October 2017

1 reference

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26 October 2017

1 reference

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Constitutive AP-1 activity and EBV infection induce PD-L1 in Hodgkin lymphomas and posttransplant lymphoproliferative disorders: implications for targeted therapy

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5376761

RSAT peak-motifs: motif analysis in full-size ChIP-seq datasets

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5376761

The extracellular signal-regulated kinase mitogen-activated protein kinase/ribosomal S6 protein kinase 1 cascade phosphorylates cAMP response element-binding protein to induce MUC5B gene expression via D-prostanoid receptor signaling

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5376761

RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome

26 October 2017

1 reference

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Airway epithelial transcription factor NK2 homeobox 1 inhibits mucous cell metaplasia and Th2 inflammation

26 October 2017

1 reference

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A common MUC5B promoter polymorphism and pulmonary fibrosis.

26 October 2017

1 reference

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International association for the study of lung cancer/american thoracic society/european respiratory society international multidisciplinary classification of lung adenocarcinoma

26 October 2017

1 reference

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Mucins in cancer: function, prognosis and therapy

26 October 2017

1 reference

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SPDEF is required for mouse pulmonary goblet cell differentiation and regulates a network of genes associated with mucus production

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5376761

CEAS: cis-regulatory element annotation system

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5376761

Oncogenic kinase NPM/ALK induces through STAT3 expression of immunosuppressive protein CD274 (PD-L1, B7-H1).

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5376761

Model-based analysis of ChIP-Seq (MACS)

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5376761

Global gene expression analysis identifies PDEF transcriptional networks regulating cell migration during cancer progression

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5376761

Prostate-derived Ets transcription factor as a favorable prognostic marker in ovarian cancer patients

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5376761

Hepatocyte nuclear factor 4alpha in the intestinal epithelial cells protects against inflammatory bowel disease

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5376761

Expression characteristics of prostate-derived Ets factor support a role in breast and prostate cancer progression

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5376761

Reduced PDEF expression increases invasion and expression of mesenchymal genes in prostate cancer cells.

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5376761

SPDEF regulates goblet cell hyperplasia in the airway epithelium

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5376761

Prostate-derived Ets factor is overexpressed in serous epithelial ovarian tumors

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5376761

PARP-2 interacts with TTF-1 and regulates expression of surfactant protein-B.

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5376761

Interferon regulatory factor-1 is prerequisite to the constitutive expression and IFN-gamma-induced upregulation of B7-H1 (CD274).

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5376761

Novel role for PDEF in epithelial cell migration and invasion

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5376761

Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5376761

Immunohistochemical analysis of MUC5B apomucin expression in breast cancer and non-malignant breast tissues

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5376761

Pdef expression in human breast cancer is correlated with invasive potential and altered gene expression.

26 October 2017

1 reference

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PD-L1 and PD-L2 are differentially regulated by Th1 and Th2 cells

26 October 2017

1 reference

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Induction and apoptotic regression of lung adenocarcinomas by regulation of a K-Ras transgene in the presence and absence of tumor suppressor genes

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5376761

Prostate epithelium-derived Ets transcription factor mRNA is overexpressed in human breast tumors and is a candidate breast tumor marker and a breast tumor antigen.

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5376761

Druggable oncogene fusions in invasive mucinous lung adenocarcinoma.

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5376761

Conditional expression of genes in the respiratory epithelium in transgenic mice: cautionary notes and toward building a better mouse trap

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5376761

Grg1 acts as a lung-specific oncogene in a transgenic mouse model

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5376761

Polycomb Repressive Complex 2 Is a Barrier to KRAS-Driven Inflammation and Epithelial-Mesenchymal Transition in Non-Small-Cell Lung Cancer.

29 May 2018

1 reference

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Frequency of EGFR and KRAS mutations in Japanese patients with lung adenocarcinoma with features of the mucinous subtype of bronchioloalveolar carcinoma

17 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5376761

Regulation of PD‐1, PD‐L1, and PD‐L2 expression during normal and autoimmune responses

17 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5376761

The predominant expression of hepatocyte nuclear factor 4α (HNF4α) in thyroid transcription factor-1 (TTF-1)-negative pulmonary adenocarcinoma

17 August 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/28255028

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

HNF4α as a Marker for Invasive Mucinous Adenocarcinoma of the Lung

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/28255028

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.15252/EMMM.201606711

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28255028%20AND%20SRC:MED&resulttype=core&format=json

4 April 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28255028%20AND%20SRC:MED&resulttype=core&format=json

4 April 2020

1 reference