Involvement of the chloroplastic isoform of tRNA ligase in the replication of viroids belonging to the family Avsunviroidae. (Q42280956)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22623792%20AND%20SRC:MED&resulttype=core&format=json

2 February 2020

title

Involvement of the chloroplastic isoform of tRNA ligase in the replication of viroids belonging to the family Avsunviroidae (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22623792%20AND%20SRC:MED&resulttype=core&format=json

2 February 2020

Avsunviroidae

1 reference

4

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2 February 2020

Diego Molina-Serrano

series ordinal

2

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2 February 2020

Ricardo Flores

series ordinal

3

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2 February 2020

author name string

María-Ángeles Nohales

series ordinal

1

1 reference

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2 February 2020

language of work or name

English

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publication date

23 May 2012

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2 February 2020

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2 February 2020

volume

86

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2 February 2020

issue

15

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2 February 2020

page(s)

8269-8276

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Noncoding RNA mediated traffic of foreign mRNA into chloroplasts reveals a novel signaling mechanism in plants

2 February 2020

cites work

1 reference

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The biology of viroid-host interactions

26 October 2017

1 reference

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26 October 2017

1 reference

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Monomeric linear RNA of citrus exocortis viroid resulting from processing in vivo has 5'-phosphomonoester and 3'-hydroxyl termini: implications for the RNase and RNA ligase involved in replication.

26 October 2017

1 reference

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A viroid RNA with a specific structural motif inhibits chloroplast development.

26 October 2017

1 reference

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Processing of nuclear viroids in vivo: an interplay between RNA conformations.

26 October 2017

1 reference

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Autolytic processing of dimeric plant virus satellite RNA

26 October 2017

1 reference

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Efficient ligation of the Schistosoma hammerhead ribozyme

26 October 2017

1 reference

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Evidence for a single rolling circle in the replication of potato spindle tuber viroid

26 October 2017

1 reference

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Viroids and viroid-host interactions.

26 October 2017

1 reference

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Structure-function analysis of yeast tRNA ligase

26 October 2017

1 reference

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Plant tRNA ligases are multifunctional enzymes that have diverged in sequence and substrate specificity from RNA ligases of other phylogenetic origins

26 October 2017

1 reference

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Peripheral regions of natural hammerhead ribozymes greatly increase their self-cleavage activity

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3421689

Sequence elements outside the hammerhead ribozyme catalytic core enable intracellular activity

26 October 2017

1 reference

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Eggplant latent viroid, the candidate type species for a new genus within the family Avsunviroidae (hammerhead viroids)

26 October 2017

1 reference

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A universal method to produce in vitro transcripts with homogeneous 3' ends

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3421689

A chloroplast protein binds a viroid RNA in vivo and facilitates its hammerhead-mediated self-cleavage

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3421689

Natural 2',5'-phosphodiester bonds found at the ligation sites of peach latent mosaic viroid

26 October 2017

1 reference

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Avsunviroidae family: viroids containing hammerhead ribozymes

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3421689

Mapping the molecular determinant of pathogenicity in a hammerhead viroid: a tetraloop within the in vivo branched RNA conformation.

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3421689

Genomic structure of three phenotypically different isolates of peach latent mosaic viroid: implications of the existence of constraints limiting the heterogeneity of viroid quasispecies

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3421689

Precisely full length, circularizable, complementary RNA: an infectious form of potato spindle tuber viroid

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3421689

26 October 2017

1 reference

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Chrysanthemum chlorotic mottle viroid: unusual structural properties of a subgroup of self-cleaving viroids with hammerhead ribozymes.

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3421689

A kinetic and thermodynamic framework for the hammerhead ribozyme reaction

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3421689

Replication of avocado sunblotch viroid: evidence for a symmetric pathway with two rolling circles and hammerhead ribozyme processing.

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3421689

A Replication Cycle for Viroids and Other Small Infectious RNA's

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3421689

Self-cleavage of plus and minus RNA transcripts of avocado sunblotch viroid

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3421689

2' phosphomonoester, 3'-5' phosphodiester bond at a unique site in a circular viral RNA.

26 October 2017

1 reference

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Plus and minus RNAs of peach latent mosaic viroid self-cleave in vitro via hammerhead structures

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3421689

Peach latent mosaic viroid is locked by a 2',5'-phosphodiester bond produced by in vitro self-ligation

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3421689

Purification of wheat germ RNA ligase. II. Mechanism of action of wheat germ RNA ligase.

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3421689

Formation of a 2′-phosphomonoester, 3′,5′-phosphodiester linkage by a novel RNA ligase in wheat germ

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3421689

A chloroplastic RNA ligase activity analogous to the bacterial and archaeal 2´-5' RNA ligase.

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3421689

Plant pre-tRNA splicing enzymes are targeted to multiple cellular compartments.

17 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3421689

Hammerheads derived from sTRSV show enhanced cleavage and ligation rate constants.

17 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3421689

Tobacco Rar1, EDS1 and NPR1/NIM1 like genes are required for N-mediated resistance to tobacco mosaic virus

17 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3421689

Initiation and maintenance of virus-induced gene silencing

17 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3421689

Comparison of multimeric plus and minus forms of viroids and virusoids

17 August 2018

1 reference

12 December 2020

Purification and sequence determination of an RNA ligase from wheat embryos

1 reference

12 December 2020

The 5' end generated in the in vitro self-cleavage reaction of avocado sunblotch viroid RNAs is present in naturally occurring linear viroid molecules

1 reference

12 December 2020

A chloroplastic RNA polymerase resistant to tagetitoxin is involved in replication of avocado sunblotch viroid

1 reference

12 December 2020

Complexes containing both polarity strands of avocado sunblotch viroid: identification in chloroplasts and characterization

1 reference

12 December 2020

Enzymatic mechanism of an RNA ligase from wheat germ

1 reference

12 December 2020

Mutational analysis of eggplant latent viroid RNA processing in Chlamydomonas reinhardtii chloroplast

1 reference

12 December 2020

Identifiers

DOI

10.1128/JVI.00629-12

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22623792%20AND%20SRC:MED&resulttype=core&format=json

2 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22623792%20AND%20SRC:MED&resulttype=core&format=json

2 February 2020

PubMed publication ID

22623792

1 reference