Direct bisulfite sequencing for examination of DNA methylation with gene and nucleotide resolution from brain tissues. (Q42065010)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22752896%20AND%20SRC:MED&resulttype=core&format=json

6 February 2020

title

Direct bisulfite sequencing for examination of DNA methylation with gene and nucleotide resolution from brain tissues (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22752896%20AND%20SRC:MED&resulttype=core&format=json

6 February 2020

0 references

1 reference

1

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22752896%20AND%20SRC:MED&resulttype=core&format=json

6 February 2020

Jeremy J. Day

series ordinal

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22752896%20AND%20SRC:MED&resulttype=core&format=json

6 February 2020

author name string

Farah D Lubin

series ordinal

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22752896%20AND%20SRC:MED&resulttype=core&format=json

6 February 2020

publication date

1 July 2012

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22752896%20AND%20SRC:MED&resulttype=core&format=json

Current protocols in neuroscience

6 February 2020

published in

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22752896%20AND%20SRC:MED&resulttype=core&format=json

6 February 2020

volume

Chapter 7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22752896%20AND%20SRC:MED&resulttype=core&format=json

6 February 2020

page(s)

Unit 7.24

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Neuronal activity modifies the DNA methylation landscape in the adult brain

6 February 2020

cites work

1 reference

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Emerging roles of TET proteins and 5-hydroxymethylcytosines in active DNA demethylation and beyond

5 June 2018

1 reference

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Epigenetic mechanisms in cognition

5 June 2018

1 reference

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Hydroxylation of 5-methylcytosine by TET1 promotes active DNA demethylation in the adult brain

5 June 2018

1 reference

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Chronic high-fat diet drives postnatal epigenetic regulation of μ-opioid receptor in the brain

5 June 2018

1 reference

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Epigenetic choreographers of neurogenesis in the adult mammalian brain

5 June 2018

1 reference

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DNA methylation and memory formation

5 June 2018

1 reference

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Comparison of sequencing-based methods to profile DNA methylation and identification of monoallelic epigenetic modifications.

5 June 2018

1 reference

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Maternal high-fat diet alters methylation and gene expression of dopamine and opioid-related genes

5 June 2018

1 reference

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Cortical DNA methylation maintains remote memory

5 June 2018

1 reference

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BS Seeker: precise mapping for bisulfite sequencing

5 June 2018

1 reference

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Dnmt1 and Dnmt3a maintain DNA methylation and regulate synaptic function in adult forebrain neurons.

5 June 2018

1 reference

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Histone methylation regulates memory formation.

5 June 2018

1 reference

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5 June 2018

1 reference

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Comparison of bisulfite sequencing PCR with pyrosequencing for measuring differences in DNA methylation

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3395468

Human DNA methylomes at base resolution show widespread epigenomic differences

5 June 2018

1 reference

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DNA excision repair proteins and Gadd45 as molecular players for active DNA demethylation

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3395468

Finding the fifth base: genome-wide sequencing of cytosine methylation.

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3395468

Lasting epigenetic influence of early-life adversity on the BDNF gene

5 June 2018

1 reference

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Neuronal activity-induced Gadd45b promotes epigenetic DNA demethylation and adult neurogenesis

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3395468

Errors in the bisulfite conversion of DNA: modulating inappropriate- and failed-conversion frequencies.

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3395468

Epigenetic regulation of BDNF gene transcription in the consolidation of fear memory

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3395468

Clozapine and sulpiride but not haloperidol or olanzapine activate brain DNA demethylation

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3395468

The IkappaB kinase regulates chromatin structure during reconsolidation of conditioned fear memories.

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3395468

Covalent modification of DNA regulates memory formation

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3395468

Defining an epigenetic code

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3395468

DNA methylation profiling of human chromosomes 6, 20 and 22

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3395468

Rapid quantification of DNA methylation through dNMP analysis following bisulfite-PCR.

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3395468

Genomic DNA methylation: the mark and its mediators

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3395468

Reversal of maternal programming of stress responses in adult offspring through methyl supplementation: altering epigenetic marking later in life.

5 June 2018

1 reference

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Chromosome-wide and promoter-specific analyses identify sites of differential DNA methylation in normal and transformed human cells

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3395468

Quantitative DNA methylation analysis based on four-dye trace data from direct sequencing of PCR amplificates

5 June 2018

1 reference

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Epigenetic programming by maternal behavior

5 June 2018

1 reference

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Epigenetic regulation of gene expression: how the genome integrates intrinsic and environmental signals

5 June 2018

1 reference

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Pyrosequencing sheds light on DNA sequencing

5 June 2018

1 reference

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5 June 2018

1 reference

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A genomic sequencing protocol that yields a positive display of 5-methylcytosine residues in individual DNA strands

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3395468

Evidence that DNA (cytosine-5) methyltransferase regulates synaptic plasticity in the hippocampus.

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3395468

Derepression of BDNF Transcription Involves Calcium-Dependent Phosphorylation of MeCP2

17 August 2018

1 reference

https://api.crossref.org/works/10.1002%2F0471142301.NS0724S60

Transient expression of the mitogen-activated protein kinase phosphatase MKP-1 (3CH134/ERP1) in the rat brain after limbic epilepsy

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F0471142301.NS0724S60

Physiology of the neurotrophins

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F0471142301.NS0724S60

Epigenetic gene regulation in the adult mammalian brain: multiple roles in memory formation

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F0471142301.NS0724S60

Activity-dependent suppression of miniature neurotransmission through the regulation of DNA methylation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F0471142301.NS0724S60

DNA modification mechanisms and gene activity during development

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22752896

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

DNA methylation profiling of pseudogene-parental gene pairs and two gene families

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22752896

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1002/0471142301.NS0724S60

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22752896%20AND%20SRC:MED&resulttype=core&format=json

6 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22752896%20AND%20SRC:MED&resulttype=core&format=json

6 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22752896%20AND%20SRC:MED&resulttype=core&format=json