Extended linkage disequilibrium in noncoding regions in a conifer, Cryptomeria japonica. (Q41948131)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22209904%20AND%20SRC:MED&resulttype=core&format=json

19 January 2020

title

Extended linkage disequilibrium in noncoding regions in a conifer, Cryptomeria japonica (English)

1 reference

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19 January 2020

1 reference

Cryptomeria japonica

1 reference

based on heuristic

inferred from title

linkage disequilibrium

1 reference

5

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19 January 2020

author name string

Etsuko Moritsuka

1

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19 January 2020

Yosuke Hisataka

2

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19 January 2020

Miho Tamura

3

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19 January 2020

Kentaro Uchiyama

4

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19 January 2020

Yoshihiko Tsumura

6

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19 January 2020

Hidenori Tachida

7

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19 January 2020

language of work or name

English

0 references

publication date

29 December 2011

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19 January 2020

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19 January 2020

volume

190

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19 January 2020

page(s)

1145-1148

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19 January 2020

issue

3

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Forest tree genomics: growing resources and applications

19 January 2020

cites work

1 reference

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5 June 2018

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The Pinus taeda genome is characterized by diverse and highly diverged repetitive sequences

5 June 2018

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Genome-wide association study of 107 phenotypes in Arabidopsis thaliana inbred lines.

5 June 2018

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The contribution of recombination to heterozygosity differs among plant evolutionary lineages and life-forms.

5 June 2018

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Demographic histories of four spruce (Picea) species of the Qinghai-Tibetan Plateau and neighboring areas inferred from multiple nuclear loci

5 June 2018

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A first-generation haplotype map of maize

5 June 2018

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Targeted isolation, sequence assembly and characterization of two white spruce (Picea glauca) BAC clones for terpenoid synthase and cytochrome P450 genes involved in conifer defence reveal insights into a conifer genome

5 June 2018

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Multilocus patterns of nucleotide diversity and divergence reveal positive selection at candidate genes related to cold hardiness in coastal Douglas Fir (Pseudotsuga menziesii var. menziesii).

5 June 2018

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Multilocus patterns of nucleotide polymorphism and the demographic history of Populus tremula

5 June 2018

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Demographic history has influenced nucleotide diversity in European Pinus sylvestris populations

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3296249

Recombination: an underappreciated factor in the evolution of plant genomes

5 June 2018

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Multilocus patterns of nucleotide diversity, linkage disequilibrium and demographic history of Norway spruce [Picea abies (L.) Karst]

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3296249

DNA sequence variation and selection of tag single-nucleotide polymorphisms at candidate genes for drought-stress response in Pinus taeda L.

5 June 2018

1 reference

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Nucleotide diversity and linkage disequilibrium in cold-hardiness- and wood quality-related candidate genes in Douglas fir.

5 June 2018

1 reference

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Nucleotide diversity and linkage disequilibrium in loblolly pine

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3296249

Association genetics of complex traits in conifers

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3296249

DnaSP, DNA polymorphism analyses by the coalescent and other methods

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3296249

Structure of linkage disequilibrium in plants

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3296249

DNA variation in a conifer, Cryptomeria japonica (Cupressaceae sensu lato)

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3296249

A coalescent-based method for detecting and estimating recombination from gene sequences

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3296249

Two-locus sampling distributions and their application

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3296249

Prediction of total genetic value using genome-wide dense marker maps

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3296249

Relationships within Cupressaceae sensu lato: a combined morphological and molecular approach

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3296249

The effects of Hill-Robertson interference between weakly selected mutations on patterns of molecular evolution and variation

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3296249

Genetic drift in an infinite population. The pseudohitchhiking model

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3296249

Seed plant phylogeny inferred from all three plant genomes: monophyly of extant gymnosperms and origin of Gnetales from conifers

5 June 2018

1 reference

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The effect of deleterious mutations on neutral molecular variation

5 June 2018

1 reference

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Identification and functional characterization of monofunctional ent-copalyl diphosphate and ent-kaurene synthases in white spruce reveal different patterns for diterpene synthase evolution for primary and secondary metabolism in gymnosperms

5 June 2018

1 reference

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Nucleotide polymorphism and phenotypic associations within and around the phytochrome B2 Locus in European aspen (Populus tremula, Salicaceae).

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3296249

Nucleotide polymorphism and linkage disequilibrium within and among natural populations of European aspen (Populus tremula L., Salicaceae).

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3296249

Adaptive and slightly deleterious evolution in a conifer, Cryptomeria japonica

18 August 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22209904

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Phylogenetic relationships in Taxodiaceae and Cupressaceae sensu stricto based on matK gene, chlL gene, trnL-trnF IGS region, and trnL intron sequences

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22209904

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1534/GENETICS.111.136697

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22209904%20AND%20SRC:MED&resulttype=core&format=json

19 January 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22209904%20AND%20SRC:MED&resulttype=core&format=json

19 January 2020

1 reference