Selective removal of promoter nucleosomes by the RSC chromatin-remodeling complex (Q41858202)

13 October 2017

Selective removal of promoter nucleosomes by the RSC chromatin-remodeling complex (English)

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13 October 2017

2

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13 October 2017

5

Roger D Kornberg

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13 October 2017

1

Yahli Lorch

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13 October 2017

Hinrich Boeger

3

1 reference

13 October 2017

Barbara Maier-Davis

series ordinal

4

1 reference

13 October 2017

3 July 2011

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Nature Structural & Molecular Biology

13 October 2017

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13 October 2017

18

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13 October 2017

8

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13 October 2017

881-885

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describes a project that uses

13 October 2017

ImageQuant

1 reference

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC3150231/fullTextXML

based on heuristic

inferred from PubMed Central ID database lookup

exact match

https://scigraph.springernature.com/pub.10.1038/nsmb.2072

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cites work

A RSC/nucleosome complex determines chromatin architecture and facilitates activator binding

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3150231

Mechanism of chromatin remodeling

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3150231

The biology of chromatin remodeling complexes

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3150231

A library of yeast transcription factor motifs reveals a widespread function for Rsc3 in targeting nucleosome exclusion at promoters

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3150231

Structure of a RSC-nucleosome complex and insights into chromatin remodeling

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3150231

Nucleosome retention and the stochastic nature of promoter chromatin remodeling for transcription

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3150231

Chromatin remodeling: insights and intrigue from single-molecule studies

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3150231

Translational and rotational settings of H2A.Z nucleosomes across the Saccharomyces cerevisiae genome.

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3150231

Chromatin remodeling by ISW2 and SWI/SNF requires DNA translocation inside the nucleosome

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3150231

Chromatin remodeling by nucleosome disassembly in vitro

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3150231

Genome-wide dynamics of Htz1, a histone H2A variant that poises repressed/basal promoters for activation through histone loss

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3150231

Global nucleosome occupancy in yeast

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3150231

Affinity purification of specific chromatin segments from chromosomal loci in yeast

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3150231

The Swi/Snf family nucleosome-remodeling complexes and transcriptional control

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3150231

Transcriptional repression of the yeast CHA1 gene requires the chromatin-remodeling complex RSC.

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3150231

Transcription factors vs nucleosomes: regulation of the PHO5 promoter in yeast

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3150231

RSC, an essential, abundant chromatin-remodeling complex

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3150231

Five SWI/SNF gene products are components of a large multisubunit complex required for transcriptional enhancement

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3150231

A multisubunit complex containing the SWI1/ADR6, SWI2/SNF2, SWI3, SNF5, and SNF6 gene products isolated from yeast

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3150231

Nucleosome disruption and enhancement of activator binding by a human SW1/SNF complex

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3150231

Stimulation of GAL4 derivative binding to nucleosomal DNA by the yeast SWI/SNF complex

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3150231

Role of chromatin structure in the regulation of transcription by RNA polymerase II.

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3150231

Nucleosomes inhibit the initiation of transcription but allow chain elongation with the displacement of histones

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3150231

Removal of positioned nucleosomes from the yeast PHO5 promoter upon PHO5 induction releases additional upstream activating DNA elements.

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3150231

Nucleosome loss activates yeast downstream promoters in vivo

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3150231

Conformational fluctuations of DNA helix

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3150231

Chromatin remodeling through directional DNA translocation from an internal nucleosomal site.

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3150231

Removal of promoter nucleosomes by disassembly rather than sliding in vivo

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3150231

Histones are first hyperacetylated and then lose contact with the activated PHO5 promoter.

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3150231

Nucleosomes unfold completely at a transcriptionally active promoter.

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3150231

Activated RSC-nucleosome complex and persistently altered form of the nucleosome

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3150231

Evidence for nucleosome depletion at active regulatory regions genome-wide

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3150231

The presence of nucleosomes on a DNA template prevents initiation by RNA polymerase II in vitro

30 September 2018

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FNSMB.2072

A 200 base pair region at the 5' end of the chicken adult beta-globin gene is accessible to nuclease digestion

31 March 2020

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FNSMB.2072

Redundancy of chromatin remodeling pathways for the induction of the yeast PHO5 promoter in vivo

31 March 2020

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FNSMB.2072

The formation and function of DNase I hypersensitive sites in the process of gene activation

31 March 2020

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21725295

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1038/NSMB.2072

1 reference

13 October 2017

1 reference

13 October 2017

PubMed publication ID

21725295

1 reference