iMiRNA-PseDPC: microRNA precursor identification with a pseudo distance-pair composition approach (Q41489664)

1 October 2017

iMiRNA-PseDPC: microRNA precursor identification with a pseudo distance-pair composition approach (English)

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1 October 2017

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5

Kuo-Chen Chou

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1 October 2017

Bin Liu

1

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1 October 2017

Longyun Fang

series ordinal

2

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1 October 2017

Fule Liu

series ordinal

3

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1 October 2017

Xiaolong Wang

series ordinal

4

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1 October 2017

3 February 2015

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Journal of Biomolecular Structure and Dynamics

1 October 2017

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1 October 2017

34

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1 October 2017

1

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1 October 2017

223-235

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Prediction of novel precursor miRNAs using a context-sensitive hidden Markov model (CSHMM).

1 October 2017

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2015.1014422

Kinetic studies with the non-nucleoside HIV-1 reverse transcriptase inhibitor U-88204E.

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2015.1014422

A uniform system for microRNA annotation

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2015.1014422

Ab initio identification of human microRNAs based on structure motifs

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2015.1014422

Support Vector Machines for Predicting Membrane Protein Types by Using Functional Domain Composition

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2015.1014422

iTIS-PseTNC: a sequence-based predictor for identifying translation initiation site in human genes using pseudo trinucleotide composition.

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2015.1014422

iRSpot-PseDNC: identify recombination spots with pseudo dinucleotide composition

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2015.1014422

PseKNC: a flexible web server for generating pseudo K-tuple nucleotide composition.

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2015.1014422

Prediction of linear B-cell epitopes using amino acid pair antigenicity scale.

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2015.1014422

Predicting Anatomical Therapeutic Chemical (ATC) classification of drugs by integrating chemical-chemical interactions and similarities

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2015.1014422

PseKNC-General: a cross-platform package for generating various modes of pseudo nucleotide compositions

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2015.1014422

Prediction of human immunodeficiency virus protease cleavage sites in proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2015.1014422

A key driving force in determination of protein structural classes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2015.1014422

Using subsite coupling to predict signal peptides

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2015.1014422

Using amphiphilic pseudo amino acid composition to predict enzyme subfamily classes

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2015.1014422

Graphic rule for drug metabolism systems

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2015.1014422

Some remarks on protein attribute prediction and pseudo amino acid composition

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2015.1014422

Some remarks on predicting multi-label attributes in molecular biosystems

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2015.1014422

Impacts of bioinformatics to medicinal chemistry

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2015.1014422

Using Functional Domain Composition and Support Vector Machines for Prediction of Protein Subcellular Location

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2015.1014422

Prediction of membrane protein types by incorporating amphipathic effects

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2015.1014422

Recent progress in protein subcellular location prediction

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2015.1014422

PseAAC-General: fast building various modes of general form of Chou's pseudo-amino acid composition for large-scale protein datasets

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2015.1014422

Amino Acid Principal Component Analysis (AAPCA) and its applications in protein structural class prediction.

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2015.1014422

Discriminating bioluminescent proteins by incorporating average chemical shift and evolutionary information into the general form of Chou's pseudo amino acid composition.

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2015.1014422

iNR-Drug: predicting the interaction of drugs with nuclear receptors in cellular networking

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2015.1014422

An introduction to ROC analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2015.1014422

iNuc-PseKNC: a sequence-based predictor for predicting nucleosome positioning in genomes with pseudo k-tuple nucleotide composition

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2015.1014422

Predicting anticancer peptides with Chou's pseudo amino acid composition and investigating their mutagenicity via Ames test

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2015.1014422

Discriminating protein structure classes by incorporating Pseudo Average Chemical Shift to Chou's general PseAAC and Support Vector Machine.

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2015.1014422

Reliable prediction of Drosha processing sites improves microRNA gene prediction.

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2015.1014422

Vienna RNA secondary structure server

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2015.1014422

MiRFinder: an improved approach and software implementation for genome-wide fast microRNA precursor scans

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2015.1014422

MiPred: classification of real and pseudo microRNA precursors using random forest prediction model with combined features

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2015.1014422

Accurate prediction of protein structural classes by incorporating predicted secondary structure information into the general form of Chou's pseudo amino acid composition

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2015.1014422

miRBase: integrating microRNA annotation and deep-sequencing data

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2015.1014422

Therapeutic microRNA strategies in human cancer

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2015.1014422

Cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2015.1014422

iPro54-PseKNC: a sequence-based predictor for identifying sigma-54 promoters in prokaryote with pseudo k-tuple nucleotide composition

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2015.1014422

iLoc-Animal: a multi-label learning classifier for predicting subcellular localization of animal proteins.

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2015.1014422

Prediction of protein secondary structure content.

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2015.1014422

iDNA-Prot|dis: identifying DNA-binding proteins by incorporating amino acid distance-pairs and reduced alphabet profile into the general pseudo amino acid composition

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2015.1014422

iDNA-Methyl: identifying DNA methylation sites via pseudo trinucleotide composition.

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2015.1014422

Using amino acid physicochemical distance transformation for fast protein remote homology detection

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2015.1014422

Combining evolutionary information extracted from frequency profiles with sequence-based kernels for protein remote homology detection.

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2015.1014422

The discriminant power of RNA features for pre-miRNA recognition

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2015.1014422

Prediction of allergenic proteins by means of the concept of Chou's pseudo amino acid composition and a machine learning approach

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2015.1014422

Chou's pseudo amino acid composition improves sequence-based antifreeze protein prediction

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2015.1014422

Human microRNA prediction through a probabilistic co-learning model of sequence and structure

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2015.1014422

Prediction of protein structure classes by incorporating different protein descriptors into general Chou's pseudo amino acid composition.

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2015.1014422

iRSpot-TNCPseAAC: identify recombination spots with trinucleotide composition and pseudo amino acid components

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2015.1014422

iUbiq-Lys: prediction of lysine ubiquitination sites in proteins by extracting sequence evolution information via a gray system model.

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2015.1014422

Virus-mPLoc: a fusion classifier for viral protein subcellular location prediction by incorporating multiple sites

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2015.1014422

Euk-PLoc: an ensemble classifier for large-scale eukaryotic protein subcellular location prediction

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2015.1014422

Predicting human microRNA precursors based on an optimized feature subset generated by GA-SVM.

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2015.1014422

Predicting membrane protein types by the LLDA algorithm

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2015.1014422

Improved and Promising Identification of Human MicroRNAs by Incorporating a High-Quality Negative Set.

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2015.1014422

MiRPara: a SVM-based software tool for prediction of most probable microRNA coding regions in genome scale sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2015.1014422

iDrug-Target: predicting the interactions between drug compounds and target proteins in cellular networking via benchmark dataset optimization approach

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2015.1014422

iAMP-2L: a two-level multi-label classifier for identifying antimicrobial peptides and their functional types.

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2015.1014422

iLoc-Virus: a multi-label learning classifier for identifying the subcellular localization of virus proteins with both single and multiple sites

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2015.1014422

iSNO-PseAAC: predict cysteine S-nitrosylation sites in proteins by incorporating position specific amino acid propensity into pseudo amino acid composition

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2015.1014422

iSNO-AAPair: incorporating amino acid pairwise coupling into PseAAC for predicting cysteine S-nitrosylation sites in proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2015.1014422

iNitro-Tyr: prediction of nitrotyrosine sites in proteins with general pseudo amino acid composition

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2015.1014422

Identification of DNA-binding proteins by incorporating evolutionary information into pseudo amino acid composition via the top-n-gram approach

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2015.1014422

PlantMiRNAPred: efficient classification of real and pseudo plant pre-miRNAs.

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2015.1014422

Classification of real and pseudo microRNA precursors using local structure-sequence features and support vector machine.

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2015.1014422

Combining multi-species genomic data for microRNA identification using a Naive Bayes classifier

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2015.1014422

Effective classification of microRNA precursors using feature mining and AdaBoost algorithms

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2015.1014422

Molecular science for drug development and biomedicine

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2015.1014422

The disposition of the LZCC protein residues in wenxiang diagram provides new insights into the protein-protein interaction mechanism

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2015.1014422

10.1080/07391102.2015.1014422

21 January 2018

Identifiers

DOI

1 reference

1 October 2017

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