Genome-wide Single-Molecule Footprinting Reveals High RNA Polymerase II Turnover at Paused Promoters. (Q41312654)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28735898%20AND%20SRC:MED&resulttype=core&format=json

25 March 2020

title

Genome-wide Single-Molecule Footprinting Reveals High RNA Polymerase II Turnover at Paused Promoters (English)

1 reference

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25 March 2020

1

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25 March 2020

6

Dirk Schübeler

1 reference

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25 March 2020

author name string

Dilek Imanci

2

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25 March 2020

Leslie Hoerner

3

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25 March 2020

Dimos Gaidatzis

4

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25 March 2020

Lukas Burger

5

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25 March 2020

publication date

20 July 2017

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25 March 2020

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25 March 2020

volume

67

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25 March 2020

issue

3

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25 March 2020

page(s)

411-422.e4

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Systematic Investigation of Transcription Factor Activity in the Context of Chromatin Using Massively Parallel Binding and Expression Assays

25 March 2020

cites work

1 reference

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1 October 2017

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Mitotic Transcriptional Activation: Clearance of Actively Engaged Pol II via Transcriptional Elongation Control in Mitosis.

1 October 2017

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Getting up to speed with transcription elongation by RNA polymerase II

1 October 2017

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RNA polymerase II pausing during development

1 October 2017

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Kinetics of promoter Pol II on Hsp70 reveal stable pausing and key insights into its regulation.

1 October 2017

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Stable pausing by RNA polymerase II provides an opportunity to target and integrate regulatory signals

1 October 2017

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Multiplex mapping of chromatin accessibility and DNA methylation within targeted single molecules identifies epigenetic heterogeneity in neural stem cells and glioblastoma

1 October 2017

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The little elongation complex functions at initiation and elongation phases of snRNA gene transcription

1 October 2017

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Precise maps of RNA polymerase reveal how promoters direct initiation and pausing

1 October 2017

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Human TFIID binds to core promoter DNA in a reorganized structural state

1 October 2017

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Genome-wide quantitative enhancer activity maps identified by STARR-seq

1 October 2017

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Defining the status of RNA polymerase at promoters

1 October 2017

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Microprocessor, Setx, Xrn2, and Rrp6 co-operate to induce premature termination of transcription by RNAPII.

1 October 2017

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Genome-wide mapping of nucleosome positioning and DNA methylation within individual DNA molecules

1 October 2017

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Paused RNA polymerase II as a developmental checkpoint

1 October 2017

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Drosophila heat shock system as a general model to investigate transcriptional regulation

1 October 2017

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Identification of functional elements and regulatory circuits by Drosophila modENCODE

1 October 2017

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Pausing of RNA polymerase II disrupts DNA-specified nucleosome organization to enable precise gene regulation

1 October 2017

1 reference

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Global analysis of short RNAs reveals widespread promoter-proximal stalling and arrest of Pol II in Drosophila

1 October 2017

1 reference

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A regulatory circuit for piwi by the large Maf gene traffic jam in Drosophila.

1 October 2017

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NELF and GAGA factor are linked to promoter-proximal pausing at many genes in Drosophila

1 October 2017

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Constitutive nucleosome depletion and ordered factor assembly at the GRP78 promoter revealed by single molecule footprinting

1 October 2017

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Variant histone H3.3 is deposited at sites of nucleosomal displacement throughout transcribed genes while active histone modifications show a promoter-proximal bias

1 October 2017

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The MTE, a new core promoter element for transcription by RNA polymerase II.

1 October 2017

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P-TEFb kinase recruitment and function at heat shock loci

1 October 2017

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mRNA decapping factors and the exonuclease Xrn2 function in widespread premature termination of RNA polymerase II transcription

1 October 2017

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Paused RNA polymerase II inhibits new transcriptional initiation.

14 June 2018

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19 August 2018

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19 August 2018

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19 August 2018

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19 August 2018

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A transcription reinitiation intermediate that is stabilized by activator

19 August 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/28735898

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1016/J.MOLCEL.2017.06.027

1 reference

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25 March 2020

1 reference

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25 March 2020

1 reference