Identification of novel Xanthomonas euvesicatoria type III effector proteins by a machine-learning approach (Q41143271)

27 September 2017

Identification of novel Xanthomonas euvesicatoria type III effector proteins by a machine-learning approach (English)

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Xanthomonas euvesicatoria

27 September 2017

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object named as

Xanthomonas euvesicatoria

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5

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=PMCID:PMC6638362&resulttype=core&format=json

15 May 2020

Doron Teper

1

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15 May 2020

David Burstein

2

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15 May 2020

Dor Salomon

3

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15 May 2020

author name string

Michael Gershovitz

4

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15 May 2020

Guido Sessa

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15 May 2020

publication date

23 June 2015

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Molecular Plant Pathology

27 September 2017

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=PMCID:PMC6638362&resulttype=core&format=json

15 May 2020

volume

17

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15 May 2020

issue

3

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15 May 2020

page(s)

398-411

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Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

15 May 2020

cites work

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Sequence-based prediction of type III secreted proteins

21 January 2018

1 reference

The Xanthomonas campestris pv. vesicatoria type III effector protein XopJ inhibits protein secretion: evidence for interference with cell wall-associated defense responses.

21 January 2018

1 reference

Identifying Important Risk Factors for Survival in Kidney Graft Failure Patients Using Random Survival Forests

21 January 2018

1 reference

The complete genome sequence of the Arabidopsis and tomato pathogen Pseudomonas syringae pv. tomato DC3000

21 January 2018

1 reference

A Tutorial on Support Vector Machines for Pattern Recognition

21 January 2018

1 reference

Genome-scale identification of Legionella pneumophila effectors using a machine learning approach

21 January 2018

1 reference

Novel type III effectors in Pseudomonas aeruginosa

21 January 2018

1 reference

Functional analysis of HrpF, a putative type III translocon protein from Xanthomonas campestris pv. vesicatoria

21 January 2018

1 reference

Direct biochemical evidence for type III secretion-dependent translocation of the AvrBs2 effector protein into plant cells

21 January 2018

1 reference

Functional domains and motifs of bacterial type III effector proteins and their roles in infection

21 January 2018

1 reference

Phytopathogen effectors subverting host immunity: different foes, similar battleground

21 January 2018

1 reference

Recognition specificity for the bacterial avirulence protein AvrPto is determined by Thr-204 in the activation loop of the tomato Pto kinase.

21 January 2018

1 reference

Bacterial type III secretion systems: specialized nanomachines for protein delivery into target cells

21 January 2018

1 reference

The bacterial effector HopX1 targets JAZ transcriptional repressors to activate jasmonate signaling and promote infection in Arabidopsis

21 January 2018

1 reference

Nicotiana benthamiana: its history and future as a model for plant-pathogen interactions

21 January 2018

1 reference

Identifying type III effectors of plant pathogens and analyzing their interaction with plant cells.

21 January 2018

1 reference

The DEFECTIVE IN ANTHER DEHISCIENCE gene encodes a novel phospholipase A1 catalyzing the initial step of jasmonic acid biosynthesis, which synchronizes pollen maturation, anther dehiscence, and flower opening in Arabidopsis

21 January 2018

1 reference

Bacterial effector activates jasmonate signaling by directly targeting JAZ transcriptional repressors

21 January 2018

1 reference

Diversity among xanthomonads pathogenic on pepper and tomato.

21 January 2018

1 reference

MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

21 January 2018

1 reference

AAindex: amino acid index database, progress report 2008

21 January 2018

1 reference

Widespread distribution and fitness contribution of Xanthomonas campestris avirulence gene avrBs2.

21 January 2018

1 reference

Xanthomonas T3S Effector XopN Suppresses PAMP-Triggered Immunity and Interacts with a Tomato Atypical Receptor-Like Kinase and TFT1.

21 January 2018

1 reference

Xanthomonas type III effector XopD desumoylates tomato transcription factor SlERF4 to suppress ethylene responses and promote pathogen growth

21 January 2018

1 reference

Specific binding of the Xanthomonas campestris pv. vesicatoria AraC-type transcriptional activator HrpX to plant-inducible promoter boxes

21 January 2018

1 reference

Wrappers for feature subset selection

21 January 2018

1 reference

Four new derivatives of the broad-host-range cloning vector pBBR1MCS, carrying different antibiotic-resistance cassettes

21 January 2018

1 reference

Distinct Pseudomonas type-III effectors use a cleavable transit peptide to target chloroplasts.

21 January 2018

1 reference

Identification of novel Coxiella burnetii Icm/Dot effectors and genetic analysis of their involvement in modulating a mitogen-activated protein kinase pathway

21 January 2018

1 reference

Pseudomonas syringae type III effector repertoires: last words in endless arguments.

21 January 2018

1 reference

Type III chaperones & Co in bacterial plant pathogens: a set of specialized bodyguards mediating effector delivery.

21 January 2018

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Evolution of the type III secretion system and its effectors in plant-microbe interactions

21 January 2018

1 reference

The conserved Xanthomonas campestris pv. vesicatoria effector protein XopX is a virulence factor and suppresses host defense in Nicotiana benthamiana

21 January 2018

1 reference

Identification of a molecular target for the Yersinia protein kinase A.

21 January 2018

1 reference

Pasteurella multocida toxin activation of heterotrimeric G proteins by deamidation

21 January 2018

1 reference

Repertoire, unified nomenclature and evolution of the Type III effector gene set in the Ralstonia solanacearum species complex.

21 January 2018

1 reference

Genomewide identification of proteins secreted by the Hrp type III protein secretion system of Pseudomonas syringae pv. tomato DC3000

21 January 2018

1 reference

A genetic screen to isolate type III effectors translocated into pepper cells during Xanthomonas infection

21 January 2018

1 reference

At least two separate gene clusters are involved in albicidin production by Xanthomonas albilineans

21 January 2018

1 reference

Pathogenomics of Xanthomonas: understanding bacterium-plant interactions

21 January 2018

1 reference

Genome sequence of the plant pathogen Ralstonia solanacearum

21 January 2018

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Analysis of new type III effectors from Xanthomonas uncovers XopB and XopS as suppressors of plant immunity

21 January 2018

1 reference

Comparison of the genomes of two Xanthomonas pathogens with differing host specificities

21 January 2018

1 reference

Regulation of cell wall-bound invertase in pepper leaves by Xanthomonas campestris pv. vesicatoria type three effectors

21 January 2018

1 reference

Durability of resistance in tomato and pepper to xanthomonads causing bacterial spot

21 January 2018

1 reference

RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

21 January 2018

1 reference

Xanthomonas euvesicatoria type III effector XopQ interacts with tomato and pepper 14-3-3 isoforms to suppress effector-triggered immunity.

21 January 2018

1 reference

Insights into Genome Plasticity and Pathogenicity of the Plant Pathogenic Bacterium Xanthomonas campestris pv. vesicatoria Revealed by the Complete Genome Sequence

21 January 2018

1 reference

The Xanthomonas campestris type III effector XopJ targets the host cell proteasome to suppress salicylic-acid mediated plant defence

21 January 2018

1 reference

Bioinformatics-enabled identification of the HrpL regulon and type III secretion system effector proteins of Pseudomonas syringae pv. phaseolicola 1448A.

21 January 2018

1 reference

HrpXv, an AraC-type regulator, activates expression of five of the six loci in the hrp cluster of Xanthomonas campestris pv. vesicatoria

21 January 2018

1 reference

The type III effectors of Xanthomonas

21 January 2018

1 reference

Symbiosis-specific expression of Rhizobium etli casA encoding a secreted calmodulin-related protein.

21 January 2018

1 reference

A single promoter sequence recognized by a newly identified alternate sigma factor directs expression of pathogenicity and host range determinants in Pseudomonas syringae

21 January 2018

1 reference

Mutations in the regulatory gene hrpG of Xanthomonas campestris pv. vesicatoria result in constitutive expression of all hrp genes

21 January 2018

1 reference

12 December 2020

Cloning of genes involved in pathogenicity of Xanthomonas campestris pv. campestris using the broad host range cosmid pLAFR1.

1 reference

12 December 2020

The phytotoxin coronatine contributes to pathogen fitness and is required for suppression of salicylic acid accumulation in tomato inoculated with Pseudomonas syringae pv. tomato DC3000

1 reference

12 December 2020

Identification of six type III effector genes with the PIP box in Xanthomonas campestris pv. campestris and five of them contribute individually to full pathogenicity

1 reference

12 December 2020

HrpG and HrpX play global roles in coordinating different virulence traits of Xanthomonas axonopodis pv. citri

1 reference

12 December 2020

Sequence and expression analysis of the hrpB pathogenicity operon of Xanthomonas campestris pv. vesicatoria which encodes eight proteins with similarity to components of the Hrp, Ysc, Spa, and Fli secretion systems

1 reference

12 December 2020

HrpG, a key hrp regulatory protein of Xanthomonas campestris pv. vesicatoria is homologous to two-component response regulators.

1 reference

12 December 2020

Suicide plasmids containing promoterless reporter genes can simultaneously disrupt and create fusions to target genes of diverse bacteria

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12 December 2020

Identifiers

DOI

10.1111/MPP.12288

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=PMCID:PMC6638362&resulttype=core&format=json

release_llbbel6ouraptg6l6nbmxbi2rq

15 May 2020

Fatcat ID

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Fatcat

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mapped directly with Wikidata item

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=PMCID:PMC6638362&resulttype=core&format=json

15 May 2020

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