Ribosomal 5S RNA: tertiary structure and interactions with proteins (Q40971290)

25 September 2017

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title

Ribosomal 5S RNA: tertiary structure and interactions with proteins (English)

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25 September 2017

3

Barciszewski J

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25 September 2017

2

Erdmann VA

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25 September 2017

Barciszewska MZ

1

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25 September 2017

1 February 1996

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25 September 2017

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25 September 2017

71

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25 September 2017

1

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25 September 2017

1-25

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Crystallization of a ribonuclease-resistant fragment of Escherichia coli 5 S ribosomal RNA and its complex with protein L25

25 September 2017

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-185X.1996.TB00740.X

Structural analysis of plant ribosomal 5S RNAs. Visualisation of novel tertiary interactions by cleavage of lupin and wheat 5SrRNAs with ribonuclease H.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-185X.1996.TB00740.X

Comparative calorimetric studies on the dynamic conformation of plant 5S rRNA. I. Thermal unfolding pattern of lupin seeds and wheat germ 5S rRNAs, also in the presence of magnesium and sperminium cations

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-185X.1996.TB00740.X

An alternative protein factor which binds the internal promoter of Xenopus 5S ribosomal RNA genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-185X.1996.TB00740.X

Involvement of "hinge" nucleotides of Xenopus laevis 5 S rRNA in the RNA structural organization and in the binding of transcription factor TFIIIA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-185X.1996.TB00740.X

Binding of TFIIIA to derivatives of 5S RNA containing sequence substitutions or deletions defines a minimal TFIIIA binding site

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-185X.1996.TB00740.X

Major nucleolar proteins shuttle between nucleus and cytoplasm

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-185X.1996.TB00740.X

Structure and function of ribosomal RNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-185X.1996.TB00740.X

Electron microscopic study of crystals of the Xenopus laevis transcription factor IIIA-5S ribosomal RNA complex

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-185X.1996.TB00740.X

Three-dimensional model of Escherichia coli ribosomal 5 S RNA as deduced from structure probing in solution and computer modeling.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-185X.1996.TB00740.X

Assembly of Xenopus transcription factor III A-5S RNA complex

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-185X.1996.TB00740.X

Erythromycin and 5S rRNA binding properties of the spinach chloroplast ribosomal protein CL22.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-185X.1996.TB00740.X

Solution structure of an unusually stable RNA tetraplex containing G- and U-quartet structures

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-185X.1996.TB00740.X

Different conformational forms of Escherichia coli and rat liver 5S rRNA revealed by Pb(II)-induced hydrolysis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-185X.1996.TB00740.X

Molecular basis for specific recognition of both RNA and DNA by a zinc finger protein.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-185X.1996.TB00740.X

Differential binding of zinc fingers from Xenopus TFIIIA and p43 to 5S RNA and the 5S RNA gene

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-185X.1996.TB00740.X

High resolution structure of the RNA duplex [U(U-A)6A]2.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-185X.1996.TB00740.X

Probing the structure of RNAs in solution

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-185X.1996.TB00740.X

Zinc finger proteins: what we know and what we would like to know

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-185X.1996.TB00740.X

Collection of published 5S and 5.8S ribosomal RNA sequences.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-185X.1996.TB00740.X

Does 5S RNA from E. coli have a pseudoknotted structure?

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-185X.1996.TB00740.X

Refinement of the solution structure of the ribonucleotide 5'r(GCAUGC)2: combined use of nuclear magnetic resonance and restrained molecular dynamics.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-185X.1996.TB00740.X

In vitro incorporation of eubacterial, archaebacterial and eukaryotic 5S rRNAs into large ribosomal subunits of Bacillus stearothermophilus

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-185X.1996.TB00740.X

Crystal structure of an RNA double helix incorporating a track of non-Watson-Crick base pairs

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-185X.1996.TB00740.X

Evolution of green plants as deduced from 5S rRNA sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-185X.1996.TB00740.X

Nuclease protection analysis of ribonucleoprotein complexes: use of the cytotoxic ribonuclease alpha-sarcin to determine the binding sites for Escherichia coli ribosomal proteins L5, L18, and L25 on 5S rRNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-185X.1996.TB00740.X

A finger protein structurally similar to TFIIIA that binds exclusively to 5S RNA in Xenopus

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-185X.1996.TB00740.X

Tetramerization of an RNA oligonucleotide containing a GGGG sequence

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-185X.1996.TB00740.X

Defining the inside and outside of a catalytic RNA molecule

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-185X.1996.TB00740.X

A small angle X-ray scattering study of a fragment derived fromE. coli5S RNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-185X.1996.TB00740.X

Specific interaction of the first three zinc fingers of TFIIIA with the internal control region of the Xenopus 5 S RNA gene.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-185X.1996.TB00740.X

Structural analysis of 5S rRNA, 5S rRNA-protein complexes and ribosomes employing RNase H and d(GTTCGG).

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-185X.1996.TB00740.X

Crystallization and preliminary diffraction studies of 5 S rRNA from the thermophilic bacterium Thermus flavus

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-185X.1996.TB00740.X

Secondary structure of eukaryotic cytoplasmic 5S ribosomal RNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-185X.1996.TB00740.X

The interactions of zinc, nickel, and cadmium with Xenopus transcription factor IIIA, assessed by equilibrium dialysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-185X.1996.TB00740.X

RNA recognition: a family matter?

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-185X.1996.TB00740.X

Evolutionary changes in the higher order structure of the ribosomal 5S RNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-185X.1996.TB00740.X

The ribosomal binding site for eukaryotic elongation factor EF-2 contains 5 S ribosomal RNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-185X.1996.TB00740.X

Metabolic characteristics of rat liver cytosolic 5SRNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-185X.1996.TB00740.X

A "bulged" double helix in a RNA-protein contact site.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-185X.1996.TB00740.X

Isolation of a 7S particle from Xenopus laevis oocytes: a 5S RNA-protein complex

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-185X.1996.TB00740.X

Three-dimensional structural model of eubacterial 5S RNA that has functional implications

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-185X.1996.TB00740.X

Comparative structural analysis of cytoplasmic and chloroplastic 5S rRNA from spinach

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-185X.1996.TB00740.X

RNA structural dynamics: pre-melting and melting transitions in E. coli 5S rRNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-185X.1996.TB00740.X

TFIIIA: nine fingers--three hands?

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-185X.1996.TB00740.X

Crystallization of the seryl-tRNA synthetase:tRNAS(ser) complex of Escherichia coli.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-185X.1996.TB00740.X

Role of RNA structure in arginine recognition of TAR RNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-185X.1996.TB00740.X

Kinking of RNA helices by bulged bases, and the structure of the human immunodeficiency virus transactivator response element

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-185X.1996.TB00740.X

A comparison of the solution structures and conformational properties of the somatic and oocyte 5S rRNAs ofXenopus laevis

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-185X.1996.TB00740.X

Ribosomal 5S RNA from Xenopus laevis oocytes: conformation and interaction with transcription factor IIIA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-185X.1996.TB00740.X

Structure of E. coli glutaminyl-tRNA synthetase complexed with tRNA(Gln) and ATP at 2.8 A resolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-185X.1996.TB00740.X

The carboxyterminal zinc fingers of TFIIIA interact with the tip of helix V of 5S RNA in the 7S ribonucleoprotein particle

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-185X.1996.TB00740.X

Two zinc finger proteins from Xenopus laevis bind the same region of 5S RNA but with different nuclease protection patterns

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-185X.1996.TB00740.X

Evidence for a Competitive-Displacement Model for the initiation of protein synthesis involving the intermolecular hybridization of 5 S rRNA, 18 S rRNA and mRNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-185X.1996.TB00740.X

Zinc release from Xenopus transcription factor IIIA induced by chemical modifications.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-185X.1996.TB00740.X

Xenopus transcription factor IIIA (XTFIIIA): after a decade of research

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-185X.1996.TB00740.X

Compilation of 5S rRNA and 5S rRNA gene sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-185X.1996.TB00740.X

Structural analyses of E.coli 5S RNA fragments, their associates and complexes with proteins L18 and L25

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-185X.1996.TB00740.X

A 5S rRNA/L5 complex is a precursor to ribosome assembly in mammalian cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-185X.1996.TB00740.X

RNA recognition by an isolated alpha helix

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-185X.1996.TB00740.X

RNA and DNA binding zinc fingers in Xenopus TFIIIA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-185X.1996.TB00740.X

Two distinct conformations of rat liver ribosomal 5S RNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-185X.1996.TB00740.X

Bending of DNA by transcription factors

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-185X.1996.TB00740.X

Computer modeling from solution data of spinach chloroplast and of Xenopus laevis somatic and oocyte 5 S rRNAs

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-185X.1996.TB00740.X

NMR analysis of helix I from the 5S RNA of Escherichia coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-185X.1996.TB00740.X

RNA polymerase III. Genes, factors and transcriptional specificity.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-185X.1996.TB00740.X

The conformation of loop E of eukaryotic 5S ribosomal RNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-185X.1996.TB00740.X

Architecture of ribosomal RNA: constraints on the sequence of "tetra-loops"

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-185X.1996.TB00740.X

A study of the conformation of 5S RNA by 31P NMR.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-185X.1996.TB00740.X

The missing nucleoside experiment: a new technique to study recognition of DNA by protein

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1469-185X.1996.TB00740.X

10.1111/J.1469-185X.1996.TB00740.X

21 January 2018

Identifiers

DOI

1 reference

25 September 2017

1 reference

PubMed ID

8603119