Decapping is preceded by 3' uridylation in a novel pathway of bulk mRNA turnover (Q40709146)

23 September 2017

Decapping is preceded by 3' uridylation in a novel pathway of bulk mRNA turnover (English)

1 reference

Gene Ontology release 2020-05-02

23 September 2017

1 reference

Gene Ontology ID

GO:0071076

polyuridylation-dependent decapping of nuclear-transcribed mRNA

1 reference

Gene Ontology release 2020-05-02

Olivia S Rissland

1

1 reference

PMCID

2875167

23 September 2017

Chris J Norbury

series ordinal

2

1 reference

23 September 2017

10 May 2009

1 reference

Nature Structural & Molecular Biology

23 September 2017

1 reference

23 September 2017

16

1 reference

23 September 2017

6

1 reference

23 September 2017

616-623

1 reference

https://scigraph.springernature.com/pub.10.1038/nsmb.1601

23 September 2017

0 references

cites work

Deadenylation is prerequisite for P-body formation and mRNA decay in mammalian cells

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The Cid1 poly(U) polymerase

25 September 2017

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urg1: a uracil-regulatable promoter system for fission yeast with short induction and repression times

25 September 2017

1 reference

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Degradation of histone mRNA requires oligouridylation followed by decapping and simultaneous degradation of the mRNA both 5' to 3' and 3' to 5'

25 September 2017

1 reference

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3' Terminal oligo U-tract-mediated stimulation of decapping

25 September 2017

1 reference

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A family of poly(U) polymerases

25 September 2017

1 reference

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A network of multiple regulatory layers shapes gene expression in fission yeast.

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2875167

Efficient RNA polyuridylation by noncanonical poly(A) polymerases

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2875167

Identification, cloning, and functional analysis of the human U6 snRNA-specific terminal uridylyl transferase

25 September 2017

1 reference

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Adenylation and exosome-mediated degradation of cotranscriptionally cleaved pre-messenger RNA in human cells

25 September 2017

1 reference

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Concerted action of poly(A) nucleases and decapping enzyme in mammalian mRNA turnover

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2875167

Movement of eukaryotic mRNAs between polysomes and cytoplasmic processing bodies

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2875167

Regulated degradation of replication-dependent histone mRNAs requires both ATR and Upf1

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2875167

Metazoan replication-dependent histone mRNAs: a distinct set of RNA polymerase II transcripts

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2875167

The enzymes and control of eukaryotic mRNA turnover

25 September 2017

1 reference

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Nonsense-mediated mRNA decay in mammalian cells involves decapping, deadenylating, and exonucleolytic activities

25 September 2017

1 reference

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Tristetraprolin and Its Family Members Can Promote the Cell-Free Deadenylation of AU-Rich Element-Containing mRNAs by Poly(A) Ribonuclease

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2875167

Decapping and Decay of Messenger RNA Occur in Cytoplasmic Processing Bodies

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2875167

Ccr4p is the catalytic subunit of a Ccr4p/Pop2p/Notp mRNA deadenylase complex in Saccharomyces cerevisiae

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2875167

The transcription factor associated Ccr4 and Caf1 proteins are components of the major cytoplasmic mRNA deadenylase in Saccharomyces cerevisiae

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2875167

Yeast Sm-like proteins function in mRNA decapping and decay

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2875167

Cid1, a fission yeast protein required for S-M checkpoint control when DNA polymerase delta or epsilon is inactivated

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2875167

DNA polymerase beta-like nucleotidyltransferase superfamily: identification of three new families, classification and evolutionary history

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2875167

Caffeine can override the S-M checkpoint in fission yeast.

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2875167

Heterologous modules for efficient and versatile PCR-based gene targeting in Schizosaccharomyces pombe

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2875167

The 3' to 5' degradation of yeast mRNAs is a general mechanism for mRNA turnover that requires the SKI2 DEVH box protein and 3' to 5' exonucleases of the exosome complex

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2875167

Messenger RNA deadenylylation precedes decapping in mammalian cells

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2875167

PAN3 encodes a subunit of the Pab1p-dependent poly(A) nuclease in Saccharomyces cerevisiae

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2875167

The yeast Pan2 protein is required for poly(A)-binding protein-stimulated poly(A)-nuclease activity

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2875167

A turnover pathway for both stable and unstable mRNAs in yeast: evidence for a requirement for deadenylation

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2875167

Deadenylation of the unstable mRNA encoded by the yeast MFA2 gene leads to decapping followed by 5'-->3' digestion of the transcript

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2875167

Turnover mechanisms of the stable yeast PGK1 mRNA

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2875167

The relationship between mRNA stability and length in Saccharomyces cerevisiae

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2875167

The stem-loop structure at the 3' end of histone mRNA is necessary and sufficient for regulation of histone mRNA stability

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2875167

A single intronless action gene in the fission yeast Schizosaccharomyces pombe: nucleotide sequence and transcripts formed in homologous and heterologous yeast

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2875167

Molecular genetic analysis of fission yeast Schizosaccharomyces pombe

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2875167

Caf1 regulates translocation of ribonucleotide reductase by releasing nucleoplasmic Spd1-Suc22 assembly

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2875167

Two distinct destabilizing elements in the c-fos message trigger deadenylation as a first step in rapid mRNA decay

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2875167

Mutations affecting stability and deadenylation of the yeast MFA2 transcript

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2875167

Uridine addition after microRNA-directed cleavage

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2875167

Decapping reaction of mRNA requires Dcp1 in fission yeast: its characterization in different species from yeast to human

19 August 2018

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FNSMB.1601

31 March 2020

Identifiers

DOI

10.1038/NSMB.1601

1 reference

PMCID

2875167

Dimensions Publication ID

23 September 2017

0 references

1 reference

23 September 2017

1 reference

PMCID

2875167