Physical and functional interaction between the methyltransferase Bud23 and the essential DEAH-box RNA helicase Ecm16 (Q40603375)

22 September 2017

Physical and functional interaction between the methyltransferase Bud23 and the essential DEAH-box RNA helicase Ecm16 (English)

1 reference

22 September 2017

Richa Sardana

1

1 reference

22 September 2017

Jieyi Zhu

series ordinal

2

1 reference

22 September 2017

Michael Gill

series ordinal

3

1 reference

22 September 2017

Arlen W Johnson

series ordinal

4

1 reference

22 September 2017

language of work or name

English

0 references

publication date

7 April 2014

1 reference

Molecular and Cellular Biology

22 September 2017

1 reference

22 September 2017

34

1 reference

22 September 2017

2208-2220

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22 September 2017

12

1 reference

describes a project that uses

22 September 2017

ImageJ

1 reference

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC4054285/fullTextXML

based on heuristic

inferred from PubMed Central ID database lookup

cites work

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Yeast and human RNA helicases involved in ribosome biogenesis: current status and perspectives.

22 September 2017

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The methyltransferase adaptor protein Trm112 is involved in biogenesis of both ribosomal subunits

22 September 2017

1 reference

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DExD/H-box RNA helicases in ribosome biogenesis

22 September 2017

1 reference

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Integrity of the P-site is probed during maturation of the 60S ribosomal subunit

22 September 2017

1 reference

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Trm112 is required for Bud23-mediated methylation of the 18S rRNA at position G1575.

22 September 2017

1 reference

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Inside the 40S ribosome assembly machinery

22 September 2017

1 reference

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The power of AAA-ATPases on the road of pre-60S ribosome maturation--molecular machines that strip pre-ribosomal particles

22 September 2017

1 reference

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Assembly of bacterial ribosomes

22 September 2017

1 reference

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Mechanism of activation of methyltransferases involved in translation by the Trm112 'hub' protein

22 September 2017

1 reference

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The initial U3 snoRNA:pre-rRNA base pairing interaction required for pre-18S rRNA folding revealed by in vivo chemical probing

22 September 2017

1 reference

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The small subunit processome in ribosome biogenesis—progress and prospects

22 September 2017

1 reference

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RNA helicases at work: binding and rearranging

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4054285

Defining the pathway of cytoplasmic maturation of the 60S ribosomal subunit.

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4054285

Prp43p contains a processive helicase structural architecture with a specific regulatory domain

22 September 2017

1 reference

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Yeast pre-rRNA processing and modification occur cotranscriptionally

22 September 2017

1 reference

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Maturation of eukaryotic ribosomes: acquisition of functionality

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4054285

Prp43 bound at different sites on the pre-rRNA performs distinct functions in ribosome synthesis

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4054285

The ATPase and helicase activities of Prp43p are stimulated by the G-patch protein Pfa1p during yeast ribosome biogenesis

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4054285

Driving ribosome assembly

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4054285

Powering through ribosome assembly

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4054285

Rational extension of the ribosome biogenesis pathway using network-guided genetics

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4054285

A complex assembly landscape for the 30S ribosomal subunit

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4054285

Assembly of ribosomes and spliceosomes: complex ribonucleoprotein machines

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4054285

Quantitative analysis of snoRNA association with pre-ribosomes and release of snR30 by Rok1 helicase

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4054285

The post-transcriptional steps of eukaryotic ribosome biogenesis

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4054285

Bud23 methylates G1575 of 18S rRNA and is required for efficient nuclear export of pre-40S subunits

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4054285

Dynamic interactions of Ntr1-Ntr2 with Prp43 and with U5 govern the recruitment of Prp43 to mediate spliceosome disassembly

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4054285

The helicase Has1p is required for snoRNA release from pre-rRNA.

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4054285

The nucleolar protein Esf2 interacts directly with the DExD/H box RNA helicase, Dbp8, to stimulate ATP hydrolysis

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4054285

Global landscape of protein complexes in the yeast Saccharomyces cerevisiae

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4054285

Comprehensive mutational analysis of yeast DEXD/H box RNA helicases involved in large ribosomal subunit biogenesis

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4054285

Comprehensive mutational analysis of yeast DEXD/H box RNA helicases required for small ribosomal subunit synthesis

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4054285

The Putative RNA Helicase Dbp4p Is Required for Release of the U14 snoRNA from Preribosomes in Saccharomyces cerevisiae

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4054285

Global analysis of protein localization in budding yeast

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4054285

Ribosome assembly in eukaryotes

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4054285

DExD/H-box proteins and their partners: helping RNA helicases unwind

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4054285

Pre-ribosomes on the road from the nucleolus to the cytoplasm

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4054285

The path from nucleolar 90S to cytoplasmic 40S pre-ribosomes

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4054285

90S pre-ribosomes include the 35S pre-rRNA, the U3 snoRNP, and 40S subunit processing factors but predominantly lack 60S synthesis factors

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4054285

A large nucleolar U3 ribonucleoprotein required for 18S ribosomal RNA biogenesis

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4054285

Genomic libraries and a host strain designed for highly efficient two-hybrid selection in yeast

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4054285

Processing of pre-ribosomal RNA in Saccharomyces cerevisiae

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4054285

The U3 small nucleolar ribonucleoprotein functions in the first step of preribosomal RNA processing

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4054285

Depletion of U3 small nucleolar RNA inhibits cleavage in the 5′ external transcribed spacer of yeast pre-ribosomal RNA and impairs formation of 18S ribosomal RNA

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4054285

The rRNA methyltransferase Bud23 shows functional interaction with components of the SSU processome and RNase MRP.

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4054285

RNA folding pathways and the self-assembly of ribosomes

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4054285

Stable DNA-binding yeast vector allowing high-bait expression for use in the two-hybrid system

17 June 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24710271

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1128/MCB.01656-13

1 reference

22 September 2017

1 reference

22 September 2017

1 reference