Identification of the RNA Pyrophosphohydrolase RppH of Helicobacter pylori and Global Analysis of Its RNA Targets (Q40409846)

http://europepmc.org/abstract/PMC/5290964

2 March 2018

title

Identification of the RNA Pyrophosphohydrolase RppH of Helicobacter pylori and Global Analysis of Its RNA Targets (English)

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http://europepmc.org/abstract/PMC/5290964

2 March 2018

0 references

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Helicobacter pylori

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1

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27974459%20AND%20SRC:MED&resulttype=core&format=json

7 June 2020

Hock Siew Tan

5

1 reference

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7 June 2020

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Cynthia M Sharma

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7 June 2020

author name string

Ping-Kun Hsieh

2

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7 June 2020

Marcus Resch

3

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7 June 2020

Quansheng Liu

4

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7 June 2020

Patricia L Foley

6

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7 June 2020

Anika Hartleib

7

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7 June 2020

Joel G Belasco

9

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7 June 2020

language of work or name

English

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publication date

14 December 2016

1 reference

http://europepmc.org/abstract/PMC/5290964

2 March 2018

published in

Journal of Biological Chemistry

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7 June 2020

volume

292

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7 June 2020

page(s)

1934-1950

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7 June 2020

issue

5

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RNA Degradation in Staphylococcus aureus: Diversity of Ribonucleases and Their Impact

7 June 2020

cites work

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Structures of RNA complexes with the Escherichia coli RNA pyrophosphohydrolase RppH unveil the basis for specific 5'-end-dependent mRNA decay

15 June 2018

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15 June 2018

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Comparative analysis of regulatory elements between Escherichia coli and Klebsiella pneumoniae by genome-wide transcription start site profiling

15 June 2018

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Helicobacter pylori relies primarily on the purine salvage pathway for purine nucleotide biosynthesis

15 June 2018

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An RNA pyrophosphohydrolase triggers 5'-exonucleolytic degradation of mRNA in Bacillus subtilis.

15 June 2018

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Composition and conservation of the mRNA-degrading machinery in bacteria

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All things must pass: contrasts and commonalities in eukaryotic and bacterial mRNA decay

15 June 2018

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The primary transcriptome of the major human pathogen Helicobacter pylori

15 June 2018

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Bacillus subtilis ribonucleases J1 and J2 form a complex with altered enzyme behaviour.

15 June 2018

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RNase Y, a novel endoribonuclease, initiates riboswitch turnover in Bacillus subtilis

15 June 2018

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15 June 2018

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Helicobacter pylori in health and disease

15 June 2018

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Structure and Biological Function of the RNA Pyrophosphohydrolase BdRppH from Bdellovibrio bacteriovorus

15 June 2018

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15 June 2018

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Structural Basis of Dcp2 Recognition and Activation by Dcp1

15 June 2018

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Development of inducible systems to engineer conditional mutants of essential genes of Helicobacter pylori

15 June 2018

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The bacterial enzyme RppH triggers messenger RNA degradation by 5' pyrophosphate removal.

15 June 2018

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Structure and function of the E. coli dihydroneopterin triphosphate pyrophosphatase: a Nudix enzyme involved in folate biosynthesis

15 June 2018

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15 June 2018

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15 June 2018

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15 June 2018

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15 June 2018

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15 June 2018

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15 June 2018

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15 June 2018

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15 June 2018

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Cloning, expression and characterization of a mammalian Nudix hydrolase-like enzyme that cleaves the pyrophosphate bond of UDP-glucose

15 June 2018

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Mechanism of the Escherichia coli ADP-ribose pyrophosphatase, a Nudix hydrolase

15 June 2018

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15 June 2018

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15 June 2018

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The Saccharomyces cerevisiae PCD1 gene encodes a peroxisomal nudix hydrolase active toward coenzyme A and its derivatives

15 June 2018

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Ribonuclease E is a 5'-end-dependent endonuclease

15 June 2018

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The Helicobacter pylori UreI protein is not involved in urease activity but is essential for bacterial survival in vivo

15 June 2018

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The complete genome sequence of the gastric pathogen Helicobacter pylori

15 June 2018

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The MutT proteins or "Nudix" hydrolases, a family of versatile, widely distributed, "housecleaning" enzymes

15 June 2018

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CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

15 June 2018

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MutT protein specifically hydrolyses a potent mutagenic substrate for DNA synthesis

15 June 2018

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RNase J depletion leads to massive changes in mRNA abundance in Helicobacter pylori.

15 June 2018

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Differential RNA-seq (dRNA-seq) for annotation of transcriptional start sites and small RNAs in Helicobacter pylori.

17 June 2018

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Mechanism of H. pylori intracellular entry: an in vitro study

17 June 2018

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Of microbe and man: determinants of Helicobacter pylori-related diseases.

17 June 2018

1 reference

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Preferential cleavage of degradative intermediates of rpsT mRNA by the Escherichia coli RNA degradosome

17 June 2018

1 reference

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Differential RNA-seq: the approach behind and the biological insight gained

17 June 2018

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PABLO analysis of RNA: 5'-phosphorylation state and 5'-end mapping

20 August 2018

1 reference

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Diversity of microRNAs in human and chimpanzee brain.

20 August 2018

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The NudA protein in the gastric pathogen Helicobacter pylori is an ubiquitous and constitutively expressed dinucleoside polyphosphate hydrolase

20 August 2018

1 reference

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Metronidazole resistance in Helicobacter pylori is due to null mutations in a gene (rdxA) that encodes an oxygen-insensitive NADPH nitroreductase.

20 August 2018

1 reference

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20 August 2018

Identifiers

DOI

10.1074/JBC.M116.761171

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27974459%20AND%20SRC:MED&resulttype=core&format=json

7 June 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27974459%20AND%20SRC:MED&resulttype=core&format=json

7 June 2020

1 reference