The transcription regulator RcoM-2 from Burkholderia xenovorans is a cysteine-ligated hemoprotein that undergoes a redox-mediated ligand switch (Q39902590)

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English	The transcription regulator RcoM-2 from Burkholderia xenovorans is a cysteine-ligated hemoprotein that undergoes a redox-mediated ligand switch	scientific article

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scholarly article

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Europe PubMed Central

15 September 2017

The transcription regulator RcoM-2 from Burkholderia xenovorans is a cysteine-ligated hemoprotein that undergoes a redox-mediated ligand switch (English)

1 reference

Europe PubMed Central

15 September 2017

Burkholderia xenovorans

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author name string

Katherine A Marvin

1

1 reference

Europe PubMed Central

15 September 2017

Robert L Kerby

2

1 reference

Europe PubMed Central

15 September 2017

Hwan Youn

3

1 reference

Europe PubMed Central

15 September 2017

Gary P Roberts

4

1 reference

Europe PubMed Central

15 September 2017

Judith N Burstyn

5

1 reference

Europe PubMed Central

15 September 2017

language of work or name

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publication date

2 August 2008

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Europe PubMed Central

15 September 2017

1 reference

Europe PubMed Central

15 September 2017

47

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Europe PubMed Central

15 September 2017

34

1 reference

Europe PubMed Central

15 September 2017

9016-9028

1 reference

Europe PubMed Central

15 September 2017

RcoM: a new single-component transcriptional regulator of CO metabolism in bacteria

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2849662

22 September 2017

Differential sensing of protein influences by NO and CO vibrations in heme adducts

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2849662

22 September 2017

Burkholderia xenovorans LB400 harbors a multi-replicon, 9.73-Mbp genome shaped for versatility

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2849662

22 September 2017

Structure-function relationships of EcDOS, a heme-regulated phosphodiesterase from Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2849662

22 September 2017

Unexpected NO-dependent DNA binding by the CooA homolog from Carboxydothermus hydrogenoformans

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2849662

22 September 2017

Ligand discrimination in soluble guanylate cyclase and the H-NOX family of heme sensor proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2849662

22 September 2017

CooA, a paradigm for gas sensing regulatory proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2849662

22 September 2017

Heme-based sensors: defining characteristics, recent developments, and regulatory hypotheses

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2849662

22 September 2017

A Redox-controlled Molecular Switch Revealed by the Crystal Structure of a Bacterial Heme PAS Sensor

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2849662

22 September 2017

Biochemical and biophysical properties of the CO-sensing transcriptional activator CooA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2849662

22 September 2017

A distal arginine in oxygen-sensing heme-PAS domains is essential to ligand binding, signal transduction, and structure

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2849662

22 September 2017

Mechanisms of ligand discrimination by heme proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2849662

22 September 2017

NPAS2: a gas-responsive transcription factor

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2849662

22 September 2017

Structure-based mechanism of O2 sensing and ligand discrimination by the FixL heme domain of Bradyrhizobium japonicum

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2849662

22 September 2017

NPAS2: an analog of clock operative in the mammalian forebrain

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2849662

22 September 2017

Phosphodiesterase A1, a regulator of cellulose synthesis in Acetobacter xylinum, is a heme-based sensor

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2849662

22 September 2017

Structure of the CO sensing transcription activator CooA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2849662

22 September 2017

The PAS superfamily: sensors of environmental and developmental signals

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2849662

22 September 2017

Myoglobin-like aerotaxis transducers in Archaea and Bacteria

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2849662

22 September 2017

Heme environmental structure of CooA is modulated by the target DNA binding. Evidence from resonance Raman spectroscopy and CO rebinding kinetics

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2849662

22 September 2017

Structurally engineered cytochromes with unusual ligand-binding properties: expression of Saccharomyces cerevisiae Met-80-->Ala iso-1-cytochrome c

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2849662

22 September 2017

Resonance raman spectroscopic studies of heme proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2849662

22 September 2017

Magnetic circular dichroism studies on microsomal aryl hydrocarbon hydroxylase: Comparison with cytochrome b5 and cytochrome P-450cam

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2849662

22 September 2017

Nitric oxide activates guanylate cyclase and increases guanosine 3′:5′-cyclic monophosphate levels in various tissue preparations

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2849662

22 September 2017

Magnetic circular dichroism studies of low-spin cytochromes. Temperature dependence and effects of axial coordination on the spectra of cytochrome c and cytochrome b5

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2849662

22 September 2017

Ligand and oxidation-state specific regulation of the heme-based oxygen sensor FixL from Sinorhizobium meliloti

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2849662

17 June 2018

Resonance Raman characterization of the heme cofactor in cystathionine beta-synthase. Identification of the Fe-S(Cys) vibration in the six-coordinate low-spin heme

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2849662

17 June 2018

Resonance Raman spectra of heme proteins. Effects of oxidation and spin state

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2849662

17 June 2018

Magnetic and spectrophotometric investigations of cytochrome b5.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2849662

17 June 2018

Cascade regulation of nif gene expression in Rhizobium meliloti.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2849662

17 June 2018

Resonance Raman spectra of cobalt myoglobins and cobalt porphyrins. Evaluation of protein effects on porphyrin structure

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2849662

17 June 2018

Low-frequency vibrations in resonance Raman spectra of horse heart myoglobin. Iron-ligand and iron-nitrogen vibrational modes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2849662

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2849662

17 June 2018

Critical role of the heme axial ligand, Met95, in locking catalysis of the phosphodiesterase from Escherichia coli (Ec DOS) toward Cyclic diGMP.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2849662

20 August 2018

CO-dependent activity-controlling mechanism of heme-containing CO-sensor protein, neuronal PAS domain protein 2.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2849662

20 August 2018

Crystal structures of deoxy and CO-bound bjFixLH reveal details of ligand recognition and signaling

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2849662

20 August 2018

The redox behavior of the heme in cystathionine beta-synthase is sensitive to pH.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2849662

20 August 2018

Investigation of the role of the N-terminal proline, the distal heme ligand in the CO sensor CooA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2849662

20 August 2018

Femtomolar sensitivity of a NO sensor from Clostridium botulinum.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2849662

20 August 2018

Spectroscopic characterization of the soluble guanylate cyclase-like heme domains from Vibrio cholerae and Thermoanaerobacter tengcongensis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2849662

20 August 2018

Characterization of Met95 mutants of a heme-regulated phosphodiesterase from Escherichia coli. Optical absorption, magnetic circular dichroism, circular dichroism, and redox potentials.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2849662

20 August 2018

Spectrum of horse-heart cytochrome c.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2849662

20 August 2018

Activation mechanism of the CO sensor CooA. Mutational and resonance Raman spectroscopic studies

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2849662

20 August 2018

Repositioning about the dimer interface of the transcription regulator CooA: a major signal transduction pathway between the effector and DNA-binding domains

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2849662

20 August 2018

Nature of the displaceable heme-axial residue in the EcDos protein, a heme-based sensor from Escherichia coli.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2849662

20 August 2018

A comparative resonance Raman analysis of heme-binding PAS domains: heme iron coordination structures of the BjFixL, AxPDEA1, EcDos, and MtDos proteins.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2849662

20 August 2018

Characterization of NO binding to human cystathionine beta-synthase: possible implications of the effects of CO and NO binding to the human enzyme

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2849662

20 August 2018

Biochemical characterization and ligand binding properties of neuroglobin, a novel member of the globin family.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2849662

20 August 2018

Synthesis of the beta and beta' subunits of Escherichia coli RNA polymerase is autogenously regulated in vivo by both transcriptional and translational mechanisms.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2849662

20 August 2018

Redox-controlled Ligand Exchange of the Heme in the CO-sensing Transcriptional Activator CooA

1 reference

https://pubmed.ncbi.nlm.nih.gov/18672900

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Spectral characterization of human hemoglobin and its derivatives

1 reference

https://pubmed.ncbi.nlm.nih.gov/18672900

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identification of two important heme site residues (cysteine 75 and histidine 77) in CooA, the CO-sensing transcription factor of Rhodospirillum rubrum

1 reference

https://pubmed.ncbi.nlm.nih.gov/18672900

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Probing the heme axial ligation in the CO-sensing CooA protein with magnetic circular dichroism spectroscopy

1 reference

https://pubmed.ncbi.nlm.nih.gov/18672900

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Modeling proline ligation in the heme-dependent CO sensor, CooA, using small-molecule analogs

1 reference

https://pubmed.ncbi.nlm.nih.gov/18672900

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Electronic absorption, EPR, and resonance raman spectroscopy of CooA, a CO-sensing transcription activator from R. rubrum, reveals a five-coordinate NO-heme

1 reference

https://pubmed.ncbi.nlm.nih.gov/18672900

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Dos, a heme-binding PAS protein from Escherichia coli, is a direct oxygen sensor

1 reference

https://pubmed.ncbi.nlm.nih.gov/18672900

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Electron paramagnetic resonance studies of nitrosyl ferrous heme complexes. Determination of an equilibrium between two conformations

1 reference

https://pubmed.ncbi.nlm.nih.gov/18672900

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Electron paramagnetic resonance detectable states of cytochrome P-450cam

1 reference

https://pubmed.ncbi.nlm.nih.gov/18672900

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Spectroscopic investigations of ferric cytochrome P-450-CAM ligand complexes. Identification of the ligand trans to cysteinate in the native enzyme

1 reference

https://pubmed.ncbi.nlm.nih.gov/18672900

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Resonance Raman investigation of carbon monoxide bonding in (carbon monoxy)hemoglobin and -myoglobin: detection of Fe-CO stretching and Fe-C-O bending vibrations and influence of the quaternary structure change

1 reference

https://pubmed.ncbi.nlm.nih.gov/18672900

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Electronic spectra for nitrosyl(protoporphyrin IX dimethyl ester)iron(II) and its complexes with nitrogenous bases as model systems for nitrosylhemoproteins

1 reference

https://pubmed.ncbi.nlm.nih.gov/18672900

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Hemoprotein H-450 Identified as a Form of Cytochrome P-450 Having an Endogenous Ligand at the 6th Coordination Position of the Heme

1 reference

https://pubmed.ncbi.nlm.nih.gov/18672900

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Nitrosyliron(III) hemoglobin: autoreduction and spectroscopy

1 reference

https://pubmed.ncbi.nlm.nih.gov/18672900

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Heme-based sensors, exemplified by the kinase FixL, are a new class of heme protein with distinctive ligand binding and autoxidation

1 reference

https://pubmed.ncbi.nlm.nih.gov/18672900

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Electron paramagnetic resonance spectral evidence for the formation of a pentacoordinate nitrosyl-heme complex on soluble guanylate cyclase

1 reference

https://pubmed.ncbi.nlm.nih.gov/18672900

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Studies of the heme coordination and ligand binding properties of soluble guanylyl cyclase (sGC): characterization of Fe(II)sGC and Fe(II)sGC(CO) by electronic absorption and magnetic circular dichroism spectroscopies and failure of CO to activate t

1 reference

https://pubmed.ncbi.nlm.nih.gov/18672900

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Nitric oxide (NO), the only nitrogen monoxide redox form capable of activating soluble guanylyl cyclase

1 reference

https://pubmed.ncbi.nlm.nih.gov/18672900

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1021/BI800486X

1 reference

Europe PubMed Central

15 September 2017

release_mmw2w5rto5h6hcnra4khjt4niq

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https://api.fatcat.wiki/v0/release/mmw2w5rto5h6hcnra4khjt4niq

24 November 2022

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mapped directly with Wikidata item

1 reference

Europe PubMed Central

15 September 2017

1 reference

Europe PubMed Central

15 September 2017

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