GLUE-IT and PEDEL-AA: new programmes for analyzing protein diversity in randomized libraries (Q39784970)

14 September 2017

GLUE-IT and PEDEL-AA: new programmes for analyzing protein diversity in randomized libraries (English)

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14 September 2017

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14 September 2017

2

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PMCID

2447733

14 September 2017

language of work or name

English

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publication date

28 April 2008

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14 September 2017

Nucleic Acids Research

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14 September 2017

36

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14 September 2017

W281-5

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14 September 2017

Web Server issue

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A study in molecular contingency: glutamine phosphoribosylpyrophosphate amidotransferase is a promiscuous and evolvable phosphoribosylanthranilate isomerase

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2447733

Steering directed protein evolution: strategies to manage combinatorial complexity of mutant libraries

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2447733

Iterative saturation mutagenesis (ISM) for rapid directed evolution of functional enzymes

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2447733

Structure and nuclear import function of the C-terminal domain of influenza virus polymerase PB2 subunit

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2447733

Automated design of degenerate codon libraries

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2447733

Strategies and computational tools for improving randomized protein libraries

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2447733

A computer program for the estimation of protein and nucleic acid sequence diversity in random point mutagenesis libraries

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2447733

Why high-error-rate random mutagenesis libraries are enriched in functional and improved proteins

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2447733

Statistics of protein library construction

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2447733

Directed evolution: selecting today's biocatalysts

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2447733

Novel methods for directed evolution of enzymes: quality, not quantity

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2447733

Chemical and biochemical strategies for the randomization of protein encoding DNA sequences: library construction methods for directed evolution

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2447733

Removing the redundancy from randomised gene libraries.

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2447733

User-friendly algorithms for estimating completeness and diversity in randomized protein-encoding libraries

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2447733

Theoretical distribution of truncation lengths in incremental truncation libraries.

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2447733

Assembly of designed oligonucleotides as an efficient method for gene recombination: a new tool in directed evolution

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2447733

Growth factor engineering by degenerate homoduplex gene family recombination

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2447733

Synthetic shuffling expands functional protein diversity by allowing amino acids to recombine independently

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2447733

Combinatorial codons: a computer program to approximate amino acid probabilities with biased nucleotide usage

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2447733

Generation of large libraries of random mutants in Bacillus subtilis by PCR-based plasmid multimerization

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2447733

Iterative saturation mutagenesis on the basis of B factors as a strategy for increasing protein thermostability

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2447733

Designing new Baeyer-Villiger monooxygenases using restricted CASTing

4 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2447733

Directed evolution of enantioselective enzymes: iterative cycles of CASTing for probing protein-sequence space

4 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2447733

Expanding the range of substrate acceptance of enzymes: combinatorial active-site saturation test

4 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18442989

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/NAR/GKN226

1 reference

14 September 2017

journals/nar/FirthP08

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

14 September 2017

1 reference

PMCID

2447733