Genome-wide association study in East Asians identifies two novel breast cancer susceptibility loci (Q39647103)

13 September 2017

Genome-wide association study in East Asians identifies two novel breast cancer susceptibility loci (English)

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genome-wide association study

13 September 2017

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13 September 2017

22

Koichi Matsuda

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Qiuyin Cai

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Xiao-Ou Shu

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Yu-Tang Gao

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Chen-Yang Shen

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Daehee Kang

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Dong-Young Noh

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Yong-Bing Xiang

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Michiaki Kubo

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Shoichiro Tsugane

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Motoki Iwasaki

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Hidemi Ito

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Wei Zheng

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Wanqing Wen

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Sue K Park

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Sun-Seog Kweon

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Jirong Long

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Yoshio Kasuga

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Hiroji Iwata

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Jiajun Shi

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Siew-Kee Low

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Xingyi Guo

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Atsushi Takahashi

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Ji-Yeob Choi

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Mi-Ryung Han

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Ying Zheng

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Mi Kyung Kim

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Bingshan Li

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Min-Ho Shin

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Min Ho Park

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27 June 2016

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Human Molecular Genetics

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3361-3371

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describes a project that uses

13 September 2017

genome-wide association study

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22 June 2022

https://europepmc.org/article/PMC/5179918

based on heuristic

inferred from PubMed Central ID database lookup

cites work

A global reference for human genetic variation

1 reference

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Single-Molecule Sequencing Reveals Estrogen-Regulated Clinically Relevant lncRNAs in Breast Cancer.

14 September 2017

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14 September 2017

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Runx1 is associated with breast cancer progression in MMTV-PyMT transgenic mice and its depletion in vitro inhibits migration and invasion

14 September 2017

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Genome-wide association analysis of more than 120,000 individuals identifies 15 new susceptibility loci for breast cancer

14 September 2017

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JNK suppresses tumor formation via a gene-expression program mediated by ATF2.

14 September 2017

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14 September 2017

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Genome-wide association study of breast cancer in Latinas identifies novel protective variants on 6q25.

14 September 2017

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Genome-wide association analysis in East Asians identifies breast cancer susceptibility loci at 1q32.1, 5q14.3 and 15q26.1.

14 September 2017

1 reference

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Expression of RUNX1 correlates with poor patient prognosis in triple negative breast cancer

14 September 2017

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Common non-synonymous SNPs associated with breast cancer susceptibility: findings from the Breast Cancer Association Consortium

14 September 2017

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Genome-wide association study identifies 25 known breast cancer susceptibility loci as risk factors for triple-negative breast cancer

14 September 2017

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Genome-wide association study of breast cancer in the Japanese population

14 September 2017

1 reference

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APOBEC3 deletion polymorphism is associated with breast cancer risk among women of European ancestry

14 September 2017

1 reference

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New breast cancer risk variant discovered at 10q25 in East Asian women

14 September 2017

1 reference

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Evaluating genome-wide association study-identified breast cancer risk variants in African-American women

14 September 2017

1 reference

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Genome-wide association study in BRCA1 mutation carriers identifies novel loci associated with breast and ovarian cancer risk

14 September 2017

1 reference

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Common genetic determinants of breast-cancer risk in East Asian women: a collaborative study of 23 637 breast cancer cases and 25 579 controls

14 September 2017

1 reference

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Genome-wide association studies identify four ER negative-specific breast cancer risk loci

14 September 2017

1 reference

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Large-scale genotyping identifies 41 new loci associated with breast cancer risk

14 September 2017

1 reference

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A common deletion in the APOBEC3 genes and breast cancer risk

14 September 2017

1 reference

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Integrative eQTL-based analyses reveal the biology of breast cancer risk loci

14 September 2017

1 reference

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Structural basis of the interaction of the breast cancer oncogene LMO4 with the tumour suppressor CtIP/RBBP8

14 September 2017

1 reference

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Creation and characterization of BAC-transgenic mice with physiological overexpression of epitope-tagged RCAN1 (DSCR1)

14 September 2017

1 reference

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Comprehensive molecular portraits of human breast tumours

14 September 2017

1 reference

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A meta-analysis of genome-wide association studies of breast cancer identifies two novel susceptibility loci at 6q14 and 20q11.

14 September 2017

1 reference

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Annotation of functional variation in personal genomes using RegulomeDB

14 September 2017

1 reference

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14 September 2017

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A genome-wide association study identifies a genetic variant in the SIAH2 locus associated with hormonal receptor-positive breast cancer in Japanese

14 September 2017

1 reference

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A genome-wide association study of breast cancer in women of African ancestry

14 September 2017

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Bif-1 suppresses breast cancer cell migration by promoting EGFR endocytic degradation

14 September 2017

1 reference

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Contribution of DEAF1 structural domains to the interaction with the breast cancer oncogene LMO4.

14 September 2017

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Brain expression genome-wide association study (eGWAS) identifies human disease-associated variants

14 September 2017

1 reference

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Pathway analyses identify TGFBR2 as potential breast cancer susceptibility gene: results from a consortium study among Asians

14 September 2017

1 reference

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The genomic and transcriptomic architecture of 2,000 breast tumours reveals novel subgroups

14 September 2017

1 reference

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Matrix eQTL: ultra fast eQTL analysis via large matrix operations

14 September 2017

1 reference

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A genome-wide association study identifies a breast cancer risk variant in ERBB4 at 2q34: results from the Seoul Breast Cancer Study

14 September 2017

1 reference

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Genome-wide association study in east Asians identifies novel susceptibility loci for breast cancer

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5179918

ChromHMM: automating chromatin-state discovery and characterization

14 September 2017

1 reference

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Genome-wide association analysis identifies three new breast cancer susceptibility loci

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5179918

The sva package for removing batch effects and other unwanted variation in high-throughput experiments

14 September 2017

1 reference

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A linear complexity phasing method for thousands of genomes

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5179918

HaploReg: a resource for exploring chromatin states, conservation, and regulatory motif alterations within sets of genetically linked variants

14 September 2017

1 reference

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A common variant at the TERT-CLPTM1L locus is associated with estrogen receptor-negative breast cancer

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5179918

Genome-wide association study identifies breast cancer risk variant at 10q21.2: results from the Asia Breast Cancer Consortium

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5179918

Intersection of FOXO- and RUNX1-mediated gene expression programs in single breast epithelial cells during morphogenesis and tumor progression

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5179918

Genetic variants associated with breast-cancer risk: comprehensive research synopsis, meta-analysis, and epidemiological evidence

14 September 2017

1 reference

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The Korean Hereditary Breast Cancer (KOHBRA) study: protocols and interim report

14 September 2017

1 reference

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Novel breast cancer susceptibility locus at 9q31.2: results of a genome-wide association study

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5179918

A locus on 19p13 modifies risk of breast cancer in BRCA1 mutation carriers and is associated with hormone receptor-negative breast cancer in the general population

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5179918

Evaluation of breast cancer susceptibility loci in Chinese women

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5179918

METAL: fast and efficient meta-analysis of genomewide association scans

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5179918

Identification of a functional genetic variant at 16q12.1 for breast cancer risk: results from the Asia Breast Cancer Consortium

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5179918

Methylenetetrahydrofolate reductase C677T polymorphism in patients with gastric and colorectal cancer in a Korean population

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5179918

Genetics and beyond--the transcriptome of human monocytes and disease susceptibility

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5179918

Genetic and clinical predictors for breast cancer risk assessment and stratification among Chinese women

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5179918

Genome-wide association study identifies five new breast cancer susceptibility loci

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5179918

Understanding mechanisms underlying human gene expression variation with RNA sequencing

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5179918

Soy food intake and breast cancer survival

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5179918

Quantifying uncertainty in genotype calls

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5179918

Evaluation of 11 breast cancer susceptibility loci in African-American women

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5179918

A multistage genome-wide association study in breast cancer identifies two new risk alleles at 1p11.2 and 14q24.1 (RAD51L1).

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5179918

Newly discovered breast cancer susceptibility loci on 3p24 and 17q23.2.

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5179918

Genome-wide association study identifies a new breast cancer susceptibility locus at 6q25.1.

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5179918

Common variants on chromosomes 2q35 and 16q12 confer susceptibility to estrogen receptor-positive breast cancer

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5179918

A genome-wide association study identifies alleles in FGFR2 associated with risk of sporadic postmenopausal breast cancer

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5179918

Genome-wide association study identifies novel breast cancer susceptibility loci

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5179918

Principal components analysis corrects for stratification in genome-wide association studies

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5179918

Patterns of cancer incidence, mortality, and prevalence across five continents: defining priorities to reduce cancer disparities in different geographic regions of the world

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5179918

The Shanghai Women's Health Study: rationale, study design, and baseline characteristics

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5179918

The LIM domain protein LMO4 interacts with the cofactor CtIP and the tumor suppressor BRCA1 and inhibits BRCA1 activity

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5179918

Association of menstrual and reproductive factors with breast cancer risk: results from the Shanghai Breast Cancer Study

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5179918

Cohort Profile: The Namwon Study and the Dong-gu Study

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5179918

LMO4 is an essential mediator of ErbB2/HER2/Neu-induced breast cancer cell cycle progression

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5179918

Genetic susceptibility to breast cancer

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5179918

Using the R Package crlmm for Genotyping and Copy Number Estimation.

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5179918

Sex-specific differences in the association between ABO genotype and gastric cancer risk in a Korean population.

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5179918

A large-scale genome-wide association study of Asian populations uncovers genetic factors influencing eight quantitative traits.

21 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5179918

Serum organochlorines and breast cancer risk in Japanese women: a case-control study

21 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5179918

Use of within-array replicate spots for assessing differential expression in microarray experiments.

21 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5179918

CLCA2 tumour suppressor gene in 1p31 is epigenetically regulated in breast cancer.

21 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5179918

Gene-environment Interactions and Polymorphism Studies of Cancer Risk in the Hospital-based Epidemiologic Research Program at Aichi Cancer Center II (HERPACC-II)

21 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5179918

Common variants on chromosome 5p12 confer susceptibility to estrogen receptor–positive breast cancer

21 August 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FHMG%2FDDW164

A common coding variant in CASP8 is associated with breast cancer risk

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FHMG%2FDDW164

The Split-Apply-Combine Strategy for Data Analysis

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FHMG%2FDDW164

21 January 2018

Identifiers

DOI

10.1093/HMG/DDW164

1 reference

13 September 2017

1 reference

13 September 2017

1 reference