R region sequences in the long terminal repeat of a murine retrovirus specifically increase expression of unspliced RNAs. (Q39550188)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10074206%20AND%20SRC:MED&resulttype=core&format=json

11 November 2019

title

R region sequences in the long terminal repeat of a murine retrovirus specifically increase expression of unspliced RNAs (English)

1 reference

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11 November 2019

author name string

A M Trubetskoy

series ordinal

1

1 reference

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11 November 2019

S A Okenquist

series ordinal

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10074206%20AND%20SRC:MED&resulttype=core&format=json

11 November 2019

J Lenz

series ordinal

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10074206%20AND%20SRC:MED&resulttype=core&format=json

11 November 2019

language of work or name

English

0 references

publication date

1 April 1999

1 reference

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11 November 2019

1 reference

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11 November 2019

volume

73

1 reference

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11 November 2019

page(s)

3477-3483

1 reference

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11 November 2019

issue

4

1 reference

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Accelerated mRNA decay in conditional mutants of yeast mRNA capping enzyme

11 November 2019

cites work

1 reference

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A novel CDK9-associated C-type cyclin interacts directly with HIV-1 Tat and mediates its high-affinity, loop-specific binding to TAR RNA

13 September 2017

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The constitutive transport element (CTE) of Mason-Pfizer monkey virus (MPMV) accesses a cellular mRNA export pathway

13 September 2017

1 reference

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TAK, an HIV Tat-associated kinase, is a member of the cyclin-dependent family of protein kinases and is induced by activation of peripheral blood lymphocytes and differentiation of promonocytic cell lines

13 September 2017

1 reference

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The HIV transactivator TAT binds to the CDK-activating kinase and activates the phosphorylation of the carboxy-terminal domain of RNA polymerase II

13 September 2017

1 reference

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Structural modifications of RNA influence the 5' exoribonucleolytic hydrolysis by XRN1 and HKE1 of Saccharomyces cerevisiae

13 September 2017

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13 September 2017

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A structured retroviral RNA element that mediates nucleocytoplasmic export of intron-containing RNA

13 September 2017

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A role for nucleoporin FG repeat domains in export of human immunodeficiency virus type 1 Rev protein and RNA from the nucleus

13 September 2017

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HIV Rev uses a conserved cellular protein export pathway for the nucleocytoplasmic transport of viral RNAs

13 September 2017

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The posttranscriptional control element of the simian retrovirus type 1 forms an extensive RNA secondary structure necessary for its function

13 September 2017

1 reference

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The hepatitis B virus posttranscriptional regulatory element is composed of two subelements

13 September 2017

1 reference

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Avian retroviral RNA element promotes unspliced RNA accumulation in the cytoplasm

13 September 2017

1 reference

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Nuclear export of late HIV-1 mRNAs occurs via a cellular protein export pathway

13 September 2017

1 reference

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A mouse mammary tumor virus promoter element near the transcription initiation site

13 September 2017

1 reference

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A small element from the Mason-Pfizer monkey virus genome makes human immunodeficiency virus type 1 expression and replication Rev-independent

13 September 2017

1 reference

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Rev and the fate of pre-mRNA in the nucleus: implications for the regulation of RNA processing in eukaryotes

13 September 2017

1 reference

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Continuous propagation of RRE(-) and Rev(-)RRE(-) human immunodeficiency virus type 1 molecular clones containing a cis-acting element of simian retrovirus type 1 in human peripheral blood lymphocytes

13 September 2017

1 reference

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A human nucleoporin-like protein that specifically interacts with HIV Rev

13 September 2017

1 reference

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Identification of a novel nuclear pore-associated protein as a functional target of the HIV-1 Rev protein in yeast

13 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=104116

Identification of a novel cellular cofactor for the Rev/Rex class of retroviral regulatory proteins

13 September 2017

1 reference

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Inhibition of RNA splicing at the Rous sarcoma virus src 3' splice site is mediated by an interaction between a negative cis element and a chicken embryo fibroblast nuclear factor

13 September 2017

1 reference

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The HIV-1 Rev activation domain is a nuclear export signal that accesses an export pathway used by specific cellular RNAs

13 September 2017

1 reference

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Recombinant genomes which express chloramphenicol acetyltransferase in mammalian cells

13 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=104116

Introns increase transcriptional efficiency in transgenic mice

13 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=104116

Comparison of intron-dependent and intron-independent gene expression

13 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=104116

Transcriptional (p40x) and post-transcriptional (p27x-III) regulators are required for the expression and replication of human T-cell leukemia virus type I genes

13 September 2017

1 reference

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The location of cis-acting regulatory sequences in the human T cell lymphotropic virus type III (HTLV-III/LAV) long terminal repeat

13 September 2017

1 reference

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Multiple cis-acting sequence elements are required for efficient splicing of simian virus 40 small-t antigen pre-mRNA

13 September 2017

1 reference

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Regulation of Rous sarcoma virus RNA splicing and stability

13 September 2017

1 reference

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The natural 5' splice site of simian virus 40 large T antigen can be improved by increasing the base complementarity to U1 RNA.

13 September 2017

1 reference

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The HIV-1 rev trans-activator acts through a structured target sequence to activate nuclear export of unspliced viral mRNA

13 September 2017

1 reference

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Reverse transcription of retroviral genomes: mutations in the terminal repeat sequences.

13 September 2017

1 reference

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HIV-1 Tat protein increases transcriptional initiation and stabilizes elongation

13 September 2017

1 reference

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Transient expression analysis of the reticuloendotheliosis virus long terminal repeat element

13 September 2017

1 reference

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Splice junctions, branch point sites, and exons: sequence statistics, identification, and applications to genome project

13 September 2017

1 reference

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The HIV-1 Tat protein: an RNA sequence-specific processivity factor?

13 September 2017

1 reference

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Activation of transcription by HIV-1 Tat protein tethered to nascent RNA through another protein

13 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=104116

Control of retroviral RNA splicing through maintenance of suboptimal processing signals

13 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=104116

Trans-activation by HIV-1 Tat via a heterologous RNA binding protein

13 September 2017

1 reference

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A generic intron increases gene expression in transgenic mice

13 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=104116

HIV-1 Tat protein promotes formation of more-processive elongation complexes

13 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=104116

Structural features in TAR RNA of human and simian immunodeficiency viruses: a phylogenetic analysis

13 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=104116

Transcriptional initiation and postinitiation effects of murine leukemia virus long terminal repeat R-region sequences

13 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=104116

HIV-1 Tat acts as a processivity factor in vitro in conjunction with cellular elongation factors

13 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=104116

Interaction between retroviral U5 RNA and the T psi C loop of the tRNA(Trp) primer is required for efficient initiation of reverse transcription

13 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=104116

Two distant upstream regions containing cis-acting signals regulating splicing facilitate 3'-end processing of avian sarcoma virus RNA

13 September 2017

1 reference

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Intronic sequences and 3' splice sites control Rous sarcoma virus RNA splicing

13 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=104116

The secondary structure of the R region of a murine leukemia virus is important for stimulation of long terminal repeat-driven gene expression.

13 September 2017

1 reference

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cis Elements required for high-level expression of unspliced Gag-containing message in Moloney murine leukemia virus

14 September 2017

1 reference

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Woodchuck hepatitis virus contains a tripartite posttranscriptional regulatory element.

14 September 2017

1 reference

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Mutational analysis of the rous sarcoma virus DR posttranscriptional control element.

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=104116

Hepatitis B virus RNA element that facilitates accumulation of surface gene transcripts in the cytoplasm.

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=104116

Mutational analysis of the trans-activation-responsive region of the human immunodeficiency virus type I long terminal repeat

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=104116

Intervening sequences increase efficiency of RNA 3' processing and accumulation of cytoplasmic RNA

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=104116

Post-transcriptional regulator (rex) of HTLV-1 initiates expression of viral structural proteins but suppresses expression of regulatory proteins

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=104116

Identification of two distinct elements in the long terminal repeat of HTLV-I responsible for maximum gene expression

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=104116

Specific binding of HIV-1 recombinant Rev protein to the Rev-responsive element in vitro

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=104116

Characterization of a transcriptional attenuator within the 5' R region of the human T cell leukemia virus type 1.

25 September 2017

1 reference

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Mutation of an RSV intronic element abolishes both U11/U12 snRNP binding and negative regulation of splicing

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=104116

A downstream regulatory element activates the bovine leukemia virus promoter

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=104116

A suboptimal src 3' splice site is necessary for efficient replication of Rous sarcoma virus

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=104116

Two elements in the bovine leukemia virus long terminal repeat that regulate gene expression

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=104116

Structural arrangements of transcription control domains within the 5'-untranslated leader regions of the HIV-1 and HIV-2 promoters

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=104116

Regulation by HIV Rev depends upon recognition of splice sites

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=104116

Sequence-specific RNA binding by the HIV-1 Rev protein.

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=104116

Tat trans-activates the human immunodeficiency virus through a nascent RNA target

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=104116

Synergy between HIV-1 Tat and adenovirus E1A is principally due to stabilization of transcriptional elongation

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=104116

Some cis- and trans-acting mutants for splicing target pre-mRNA to the cytoplasm

15 June 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/10074206

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

The role of branchpoint and 3'-exon sequences in the control of balanced splicing of avian retrovirus RNA

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/10074206

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10074206%20AND%20SRC:MED&resulttype=core&format=json

11 November 2019

1 reference