An in vitro system recapitulates chromatin remodeling at the PHO5 promoter (Q39445212)

12 September 2017

An in vitro system recapitulates chromatin remodeling at the PHO5 promoter (English)

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12 September 2017

E S Haswell

1

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12 September 2017

E K O'Shea

series ordinal

2

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12 September 2017

language of work or name

English

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publication date

1 April 1999

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Molecular and Cellular Biology

12 September 2017

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12 September 2017

19

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4

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12 September 2017

2817-2827

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describes a project that uses

12 September 2017

ImageQuant

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11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC84074/fullTextXML

inferred from PubMed Central ID database lookup

cites work

Phosphorylation regulates association of the transcription factor Pho4 with its import receptor Pse1/Kap121.

1 reference

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Transcriptional activators direct histone acetyltransferase complexes to nucleosomes

12 September 2017

1 reference

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Cooperative Pho2-Pho4 interactions at the PHO5 promoter are critical for binding of Pho4 to UASp1 and for efficient transactivation by Pho4 at UASp2.

12 September 2017

1 reference

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FACT, a factor that facilitates transcript elongation through nucleosomes

12 September 2017

1 reference

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The Gcn4p activation domain interacts specifically in vitro with RNA polymerase II holoenzyme, TFIID, and the Adap-Gcn5p coactivator complex

12 September 2017

1 reference

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Repression by Ume6 involves recruitment of a complex containing Sin3 corepressor and Rpd3 histone deacetylase to target promoters

12 September 2017

1 reference

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RSC, an essential, abundant chromatin-remodeling complex

12 September 2017

1 reference

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The homeodomain protein Pho2 and the basic-helix-loop-helix protein Pho4 bind DNA cooperatively at the yeast PHO5 promoter

12 September 2017

1 reference

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Essential role of Swp73p in the function of yeast Swi/Snf complex

12 September 2017

1 reference

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Transcriptional induction of genes encoding endoplasmic reticulum resident proteins requires a transmembrane protein kinase

12 September 2017

1 reference

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The yeast SNF2/SWI2 protein has DNA-stimulated ATPase activity required for transcriptional activation

12 September 2017

1 reference

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Centromere function on minichromosomes isolated from budding yeast

12 September 2017

1 reference

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Five SWI/SNF gene products are components of a large multisubunit complex required for transcriptional enhancement

12 September 2017

1 reference

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A multisubunit complex containing the SWI1/ADR6, SWI2/SNF2, SWI3, SNF5, and SNF6 gene products isolated from yeast

12 September 2017

1 reference

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Phosphorylation of the transcription factor PHO4 by a cyclin-CDK complex, PHO80-PHO85.

12 September 2017

1 reference

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The transactivation domain of Pho4 is required for nucleosome disruption at the PHO5 promoter.

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=84074

A nucleosome precludes binding of the transcription factor Pho4 in vivo to a critical target site in the PHO5 promoter

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=84074

Evolution of the SNF2 family of proteins: subfamilies with distinct sequences and functions

12 September 2017

1 reference

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Lyticase: endoglucanase and protease activities that act together in yeast cell lysis

12 September 2017

1 reference

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Construction, Replication, and Chromatin Structure of TRP1 RI Circle, a Multiple-Copy Synthetic Plasmid Derived from Saccharomyces cerevisiae Chromosomal DNA

12 September 2017

1 reference

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Structure of the transcriptionally repressed phosphate-repressible acid phosphatase gene (PHO5) of Saccharomyces cerevisiae

12 September 2017

1 reference

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Depletion of histone H4 and nucleosomes activates the PHO5 gene in Saccharomyces cerevisiae.

12 September 2017

1 reference

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The sequence of the Saccharomyces cerevisiae gene PHO2 codes for a regulatory protein with unusual aminoacid composition

12 September 2017

1 reference

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The two positively acting regulatory proteins PHO2 and PHO4 physically interact with PHO5 upstream activation regions

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=84074

Role of trans-activating proteins in the generation of active chromatin at the PHO5 promoter in S. cerevisiae.

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=84074

SNF6 encodes a nuclear protein that is required for expression of many genes in Saccharomyces cerevisiae

12 September 2017

1 reference

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12 September 2017

Yeast minichromosomes

1 reference

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An essential Saccharomyces cerevisiae gene homologous to SNF2 encodes a helicase-related protein in a new family

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=84074

Chromatin structure and transcription

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=84074

Yeast SNF/SWI transcriptional activators and the SPT/SIN chromatin connection

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=84074

Role for ADA/GCN5 products in antagonizing chromatin-mediated transcriptional repression

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=84074

Role of chromatin structure in the regulation of transcription by RNA polymerase II.

14 September 2017

1 reference

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The SWI-SNF complex: a chromatin remodeling machine?

14 September 2017

1 reference

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A functional role for nucleosomes in the repression of a yeast promoter

14 September 2017

1 reference

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Remodeling chromatin structures for transcription: what happens to the histones?

25 September 2017

1 reference

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Signaling phosphate starvation

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=84074

Transcription factors vs nucleosomes: regulation of the PHO5 promoter in yeast

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=84074

Absence of Gcn5 HAT activity defines a novel state in the opening of chromatin at the PHO5 promoter in yeast.

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=84074

Transcription of chromatin: these are complex times

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=84074

ACF, an ISWI-containing and ATP-utilizing chromatin assembly and remodeling factor

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=84074

Removal of positioned nucleosomes from the yeast PHO5 promoter upon PHO5 induction releases additional upstream activating DNA elements.

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=84074

Nucleosome disruption at the yeast PHO5 promoter upon PHO5 induction occurs in the absence of DNA replication

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=84074

Retroviral integration into minichromosomes in vitro

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=84074

Chromatin remodeling machines: similar motors, ulterior motives

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=84074

Chromatin-remodelling factor CHRAC contains the ATPases ISWI and topoisomerase II.

21 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=84074

Purification and properties of an ATP-dependent nucleosome remodeling factor.

21 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=84074

The 5' ends of Drosophila heat shock genes in chromatin are hypersensitive to DNase I.

21 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=84074

Modulation of chromatin structure associated with derepression of the acid phosphatase gene of Saccharomyces cerevisiae

21 August 2018

1 reference

12 December 2020

Nuclease digestion of circular TRP1ARS1 chromatin reveals positioned nucleosomes separated by nuclease-sensitive regions

1 reference

12 December 2020

Isolation and partial characterization of 2-microns yeast plasmid as a transcriptionally active minichromosome

1 reference

12 December 2020

Isolation of yeast plasmid chromatin

1 reference

12 December 2020

Analysis of nucleosome positioning by indirect end-labeling and molecular cloning

1 reference

12 December 2020

Function of the PHO regulatory genes for repressible acid phosphatase synthesis in Saccharomyces cerevisiae

1 reference

12 December 2020

[38] RNA polymerase II transcription in vitro

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12 December 2020

C-myc and the yeast transcription factor PHO4 share a common CACGTG-binding motif

1 reference

12 December 2020

Transcription factor loading on the MMTV promoter: a bimodal mechanism for promoter activation

1 reference

12 December 2020

Structural and functional requirements for the chromatin transition at the PHO5 promoter in Saccharomyces cerevisiae upon PHO5 activation

1 reference

12 December 2020

High-level expression of endogenous acid phosphatase inhibits growth and vectorial secretion in Saccharomyces cerevisiae

1 reference

12 December 2020

RNA polymerase II holoenzyme contains SWI/SNF regulators involved in chromatin remodeling

1 reference

12 December 2020

RNA polymerase II holoenzyme recruitment is sufficient to remodel chromatin at the yeast PHO5 promoter

1 reference

12 December 2020

Identifiers

DOI

10.1128/MCB.19.4.2817

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12 September 2017

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12 September 2017

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