General rules for functional microRNA targeting (Q39254411)

10 September 2017

General rules for functional microRNA targeting (English)

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10 September 2017

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Sukjun Kim

4

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author name string

Doyeon Kim

1

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10 September 2017

You Me Sung

2

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10 September 2017

Jinman Park

3

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10 September 2017

Jongkyu Kim

5

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10 September 2017

Junhee Park

6

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10 September 2017

Haeok Ha

7

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10 September 2017

Jung Yoon Bae

8

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10 September 2017

SoHui Kim

9

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10 September 2017

Daehyun Baek

10

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10 September 2017

language of work or name

English

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publication date

24 October 2016

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10 September 2017

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10 September 2017

48

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12

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1517-1526

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https://scigraph.springernature.com/pub.10.1038/ng.3694

10 September 2017

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cites work

Most mammalian mRNAs are conserved targets of microRNAs

1 reference

MicroRNAs: target recognition and regulatory functions

21 January 2018

1 reference

Widespread changes in protein synthesis induced by microRNAs

21 January 2018

1 reference

miR-29b moulds the tumour microenvironment to repress metastasis

21 January 2018

1 reference

Epigenetics and genetics. MicroRNAs en route to the clinic: progress in validating and targeting microRNAs for cancer therapy

21 January 2018

1 reference

Conserved seed pairing, often flanked by adenosines, indicates that thousands of human genes are microRNA targets

21 January 2018

1 reference

The widespread impact of mammalian MicroRNAs on mRNA repression and evolution

21 January 2018

1 reference

Combinatorial microRNA target predictions

21 January 2018

1 reference

MicroRNA targeting specificity in mammals: determinants beyond seed pairing

21 January 2018

1 reference

The impact of microRNAs on protein output

21 January 2018

1 reference

Principles of microRNA-target recognition

21 January 2018

1 reference

Experimental validation of the importance of seed complement frequency to siRNA specificity

21 January 2018

1 reference

Microarray analysis shows that some microRNAs downregulate large numbers of target mRNAs

21 January 2018

1 reference

Inference of miRNA targets using evolutionary conservation and pathway analysis

21 January 2018

1 reference

Determinants of targeting by endogenous and exogenous microRNAs and siRNAs

21 January 2018

1 reference

Expanding the microRNA targeting code: functional sites with centered pairing

21 January 2018

1 reference

Systematic identification of mRNAs recruited to argonaute 2 by specific microRNAs and corresponding changes in transcript abundance

21 January 2018

1 reference

An alternative mode of microRNA target recognition

21 January 2018

1 reference

Mitochondrial transport in neurons: impact on synaptic homeostasis and neurodegeneration

21 January 2018

1 reference

MicroRNA target site identification by integrating sequence and binding information

21 January 2018

1 reference

Mapping the human miRNA interactome by CLASH reveals frequent noncanonical binding

21 January 2018

1 reference

Cross-linking, ligation, and sequencing of hybrids reveals RNA-RNA interactions in yeast

21 January 2018

1 reference

A biophysical miRNA-mRNA interaction model infers canonical and noncanonical targets

21 January 2018

1 reference

Transcriptome-wide miR-155 binding map reveals widespread noncanonical microRNA targeting

21 January 2018

1 reference

PARalyzer: definition of RNA binding sites from PAR-CLIP short-read sequence data

21 January 2018

1 reference

Predicting effective microRNA target sites in mammalian mRNAs

21 January 2018

1 reference

21 January 2018

ViennaRNA Package 2.0

1 reference

Complete suboptimal folding of RNA and the stability of secondary structures.

21 January 2018

1 reference

Weak seed-pairing stability and high target-site abundance decrease the proficiency of lsy-6 and other microRNAs

21 January 2018

1 reference

Structural basis for microRNA targeting

21 January 2018

1 reference

Thermodynamic stability and Watson-Crick base pairing in the seed duplex are major determinants of the efficiency of the siRNA-based off-target effect.

21 January 2018

1 reference

Target mRNA abundance dilutes microRNA and siRNA activity

21 January 2018

1 reference

Antagonism of microRNA-122 in mice by systemically administered LNA-antimiR leads to up-regulation of a large set of predicted target mRNAs in the liver

21 January 2018

1 reference

Silencing of microRNAs in vivo with 'antagomirs'

21 January 2018

1 reference

LNA-mediated microRNA silencing in non-human primates

21 January 2018

1 reference

Experimental identification of microRNA-140 targets by silencing and overexpressing miR-140.

21 January 2018

1 reference

Dysregulation of cardiogenesis, cardiac conduction, and cell cycle in mice lacking miRNA-1-2

21 January 2018

1 reference

microRNA-155 regulates the generation of immunoglobulin class-switched plasma cells

21 January 2018

1 reference

Requirement of bic/microRNA-155 for normal immune function

21 January 2018

1 reference

Zebrafish MiR-430 promotes deadenylation and clearance of maternal mRNAs

21 January 2018

1 reference

A quantitative analysis of CLIP methods for identifying binding sites of RNA-binding proteins

21 January 2018

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Detection of nonneutral substitution rates on mammalian phylogenies

21 January 2018

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mRNA destabilization is the dominant effect of mammalian microRNAs by the time substantial repression ensues

21 January 2018

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Global and local competition between exogenously introduced microRNAs and endogenously expressed microRNAs

21 January 2018

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Evolution and Biological Roles of Alternative 3'UTRs

21 January 2018

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A gene atlas of the mouse and human protein-encoding transcriptomes

21 January 2018

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Transcripts targeted by the microRNA-16 family cooperatively regulate cell cycle progression

21 January 2018

1 reference

A microRNA component of the p53 tumour suppressor network

21 January 2018

1 reference

MicroRNA miR-30 family regulates non-attachment growth of breast cancer cells

21 January 2018

1 reference

A link between mir-100 and FRAP1/mTOR in clear cell ovarian cancer

21 January 2018

1 reference

Protein-RNA interactions: new genomic technologies and perspectives

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/27776116

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Argonaute HITS-CLIP decodes microRNA-mRNA interaction maps

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/27776116

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1038/NG.3694

1 reference

10 September 2017

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