Primer Sets Developed for Functional Genes Reveal Shifts in Functionality of Fungal Community in Soils (Q39192233)

9 September 2017

Primer Sets Developed for Functional Genes Reveal Shifts in Functionality of Fungal Community in Soils (English)

1 reference

9 September 2017

1 reference

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27965632%20AND%20SRC:MED&resulttype=core&format=json

7 June 2020

2

Johannes A van Veen

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27965632%20AND%20SRC:MED&resulttype=core&format=json

7 June 2020

publication date

29 November 2016

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Frontiers in Microbiology

9 September 2017

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27965632%20AND%20SRC:MED&resulttype=core&format=json

7 June 2020

volume

7

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7 June 2020

page(s)

1897

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Coming of age: ten years of next-generation sequencing technologies

7 June 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5126076

Fungal biogeography. Global diversity and geography of soil fungi

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5126076

Genomic and transcriptomic analysis of Laccaria bicolor CAZome reveals insights into polysaccharides remodelling during symbiosis establishment

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5126076

The carbohydrate-active enzymes database (CAZy) in 2013

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5126076

Meta-analysis of deep-sequenced fungal communities indicates limited taxon sharing between studies and the presence of biogeographic patterns

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5126076

Fungal community analysis by high-throughput sequencing of amplified markers--a user's guide

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5126076

The Paleozoic Origin of Enzymatic Lignin Decomposition Reconstructed from 31 Fungal Genomes

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5126076

Soil fungal cellobiohydrolase I gene (cbhI) composition and expression in a loblolly pine plantation under conditions of elevated atmospheric CO2 and nitrogen fertilization.

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5126076

Metatranscriptomics reveals the diversity of genes expressed by eukaryotes in forest soils

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5126076

Fungal chitinases: diversity, mechanistic properties and biotechnological potential

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5126076

Oxidoreductive cellulose depolymerization by the enzymes cellobiose dehydrogenase and glycoside hydrolase 61.

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5126076

The Plant Cell Wall-Decomposing Machinery Underlies the Functional Diversity of Forest Fungi

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5126076

Simulated atmospheric N deposition alters fungal community composition and suppresses ligninolytic gene expression in a northern hardwood forest.

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5126076

Community profiling and gene expression of fungal assimilatory nitrate reductases in agricultural soil

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5126076

Fungi unearthed: transcripts encoding lignocellulolytic and chitinolytic enzymes in forest soil

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5126076

An Antarctic hot spot for fungi at Shackleton's historic hut on Cape Royds

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5126076

Genome, transcriptome, and secretome analysis of wood decay fungus Postia placenta supports unique mechanisms of lignocellulose conversion

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5126076

Where are all the undescribed fungi?

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5126076

Structure and action mechanism of ligninolytic enzymes

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5126076

Isolation of fungal cellobiohydrolase I genes from sporocarps and forest soils by PCR

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5126076

Clustal W and Clustal X version 2.0

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5126076

MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) Software Version 4.0

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5126076

Fungal laccases - occurrence and properties

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5126076

UniFrac: a new phylogenetic method for comparing microbial communities

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5126076

Living in a fungal world: impact of fungi on soil bacterial niche development

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5126076

Microbial cellulose utilization: fundamentals and biotechnology

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5126076

Decomposition rate of organic substrates in relation to the species diversity of soil saprophytic fungi

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5126076

Catalytic properties and classification of cellobiose dehydrogenases from ascomycetes

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5126076

A novel hybrid gene prediction method employing protein multiple sequence alignments.

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5126076

ClassII peroxidase-encoding genes are present in a phylogenetically wide range of ectomycorrhizal fungi.

21 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5126076

Oxalate decarboxylase of the white-rot fungus Dichomitus squalens demonstrates a novel enzyme primary structure and non-induced expression on wood and in liquid cultures.

21 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5126076

Laccase gene composition and relative abundance in oak forest soil is not affected by short-term nitrogen fertilization

21 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5126076

The magnitude of fungal diversity: the 1.5 million species estimate revisited

21 August 2018

1 reference

https://api.crossref.org/works/10.3389%2FFMICB.2016.01897

Soil biodiversity and carbon cycling: a review and synthesis of studies examining diversity-function relationships

21 January 2018

1 reference

https://api.crossref.org/works/10.3389%2FFMICB.2016.01897

Comparison of Wood Decay among Diverse Lignicolous Fungi

21 January 2018

1 reference

https://api.crossref.org/works/10.3389%2FFMICB.2016.01897

Effect of genetic modification of potato starch on decomposition of leaves and tubers and on fungal decomposer communities

21 January 2018

1 reference

https://api.crossref.org/works/10.3389%2FFMICB.2016.01897

Modelling C and N mineralisation in soil food webs during secondary succession on ex-arable land

21 January 2018

1 reference

https://api.crossref.org/works/10.3389%2FFMICB.2016.01897

Carbon flux from plants to soil: roots are a below-ground source of phenolic secondary compounds in an alpine ecosystem

21 January 2018

1 reference

https://api.crossref.org/works/10.3389%2FFMICB.2016.01897

Soil conditions and land use intensification effects on soil microbial communities across a range of European field sites

21 January 2018

1 reference

https://api.crossref.org/works/10.3389%2FFMICB.2016.01897

Fungal biomass development in a chronosequence of land abandonment

21 January 2018

1 reference

https://api.crossref.org/works/10.3389%2FFMICB.2016.01897

Temporal changes in diversity and expression patterns of fungal laccase genes within the organic horizon of a brown forest soil

21 January 2018

1 reference

https://api.crossref.org/works/10.3389%2FFMICB.2016.01897

Mycorrhizal fungal diversity determines plant biodiversity, ecosystem variability and productivity

21 January 2018

1 reference

https://api.crossref.org/works/10.3389%2FFMICB.2016.01897

Patterns of lignin degradation and oxidative enzyme secretion by different wood- and litter-colonizing basidiomycetes and ascomycetes grown on beech-wood

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/27965632

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Are basidiomycete laccase gene abundance and composition related to reduced lignolytic activity under elevated atmospheric NO3(-) deposition in a northern hardwood forest?

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/27965632

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.3389/FMICB.2016.01897

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27965632%20AND%20SRC:MED&resulttype=core&format=json

release_tct3csoahvgl7iukh55b457hpq

7 June 2020

Fatcat ID

0 references

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27965632%20AND%20SRC:MED&resulttype=core&format=json

7 June 2020

1 reference