H3K4me2 reliably defines transcription factor binding regions in different cells (Q39023626)

8 September 2017

H3K4me2 reliably defines transcription factor binding regions in different cells (English)

1 reference

8 September 2017

Ying Wang

1

1 reference

PubMed ID

24530516

8 September 2017

Xiaoman Li

series ordinal

2

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PubMed ID

24530516

8 September 2017

Haiyan Hu

series ordinal

3

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8 September 2017

12 February 2014

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8 September 2017

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8 September 2017

103

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8 September 2017

2-3

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8 September 2017

222-228

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Integrated approaches reveal determinants of genome-wide binding and function of the transcription factor Pho4.

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1 reference

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1 reference

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DREME: motif discovery in transcription factor ChIP-seq data

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On the detection and refinement of transcription factor binding sites using ChIP-Seq data

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Systematic identification of conserved motif modules in the human genome

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Deep and wide digging for binding motifs in ChIP-Seq data.

7 January 2021

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7 January 2021

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Distinct and predictive chromatin signatures of transcriptional promoters and enhancers in the human genome

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Sequence and chromatin determinants of cell-type-specific transcription factor binding

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Sequence features and chromatin structure around the genomic regions bound by 119 human transcription factors

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TRANSFAC: a database on transcription factors and their DNA binding sites

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Identifying dispersed epigenomic domains from ChIP-Seq data

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A clustering approach for identification of enriched domains from histone modification ChIP-Seq data

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FAIRE (Formaldehyde-Assisted Isolation of Regulatory Elements) isolates active regulatory elements from human chromatin

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Systematic localization of common disease-associated variation in regulatory DNA

7 January 2021

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Open chromatin defined by DNaseI and FAIRE identifies regulatory elements that shape cell-type identity

7 January 2021

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Genome-wide computational prediction of transcriptional regulatory modules reveals new insights into human gene expression

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Individual Comparisons by Ranking Methods

7 January 2021

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Selective binding of sterol regulatory element-binding protein isoforms and co-regulatory proteins to promoters for lipid metabolic genes in liver

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Integrated expression profiling and genome-wide analysis of ChREBP targets reveals the dual role for ChREBP in glucose-regulated gene expression.

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Unsupervised pattern discovery in human chromatin structure through genomic segmentation

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Differential binding and co-binding pattern of FOXA1 and FOXA3 and their relation to H3K4me3 in HepG2 cells revealed by ChIP-seq

7 January 2021

1 reference

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Genome-wide occupancy of SREBP1 and its partners NFY and SP1 reveals novel functional roles and combinatorial regulation of distinct classes of genes

7 January 2021

1 reference

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Accurate inference of transcription factor binding from DNA sequence and chromatin accessibility data

7 January 2021

1 reference

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10.1016/J.YGENO.2014.02.002

7 January 2021

Identifiers

DOI

1 reference

8 September 2017

1 reference

PubMed ID

24530516