Collidoscope: An Improved Tool for Computing Collisional Cross-Sections with the Trajectory Method (Q38962881)

http://europepmc.org/abstract/PMC/5634518

24 June 2018

title

Collidoscope: An Improved Tool for Computing Collisional Cross-Sections with the Trajectory Method (English)

1 reference

http://europepmc.org/abstract/PMC/5634518

24 June 2018

author

Micah T Donor

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28194738%20AND%20SRC:MED&resulttype=core&format=json

11 June 2020

author name string

Simon A Ewing

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28194738%20AND%20SRC:MED&resulttype=core&format=json

11 June 2020

Jesse W Wilson

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28194738%20AND%20SRC:MED&resulttype=core&format=json

11 June 2020

James S Prell

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28194738%20AND%20SRC:MED&resulttype=core&format=json

11 June 2020

publication date

13 February 2017

1 reference

http://europepmc.org/abstract/PMC/5634518

24 June 2018

published in

Journal of the American Society for Mass Spectrometry

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28194738%20AND%20SRC:MED&resulttype=core&format=json

11 June 2020

volume

28

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28194738%20AND%20SRC:MED&resulttype=core&format=json

11 June 2020

page(s)

587-596

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28194738%20AND%20SRC:MED&resulttype=core&format=json

11 June 2020

issue

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28194738%20AND%20SRC:MED&resulttype=core&format=json

https://scigraph.springernature.com/pub.10.1007/s13361-017-1594-2

11 June 2020

exact match

0 references

cites work

Collision-Induced Dissociation of Electrosprayed Protein Complexes: An All-Atom Molecular Dynamics Model with Mobile Protons

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5634518

Sizing and Discovery of Nanosized Polyoxometalate Clusters by Mass Spectrometry

25 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5634518

Hybrid ion mobility and mass spectrometry as a separation tool

25 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5634518

Collision cross sections for structural proteomics

25 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5634518

Effective ion mobility calculations for macromolecules by scattering on electron clouds.

25 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5634518

Membrane proteins bind lipids selectively to modulate their structure and function.

25 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5634518

The power of ion mobility-mass spectrometry for structural characterization and the study of conformational dynamics

25 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5634518

Ion mobility-mass spectrometry of intact protein--ligand complexes for pharmaceutical drug discovery and development.

25 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5634518

Mass spectrometry methods for intrinsically disordered proteins.

25 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5634518

Mass spectrometry based tools to investigate protein-ligand interactions for drug discovery

25 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5634518

Supercharging protein complexes from aqueous solution disrupts their native conformations

25 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5634518

Direct ionization of large proteins and protein complexes by desorption electrospray ionization-mass spectrometry

25 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5634518

Tandem differential mobility analysis-mass spectrometry reveals partial gas-phase collapse of the GroEL complex

25 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5634518

Collision cross sections of proteins and their complexes: a calibration framework and database for gas-phase structural biology

25 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5634518

How useful is ion mobility mass spectrometry for structural biology? The relationship between protein crystal structures and their collision cross sections in the gas phase

25 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5634518

Amyloid-β protein oligomerization and the importance of tetramers and dodecamers in the aetiology of Alzheimer's disease

25 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5634518

Ion mobility mass spectrometry of proteins and protein assemblies.

25 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5634518

Subunit architecture of multiprotein assemblies determined using restraints from gas-phase measurements

25 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5634518

Radio-Frequency (rf) Confinement in Ion Mobility Spectrometry: Apparent Mobilities and Effective Temperatures.

25 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5634518

Gas molecule scattering & ion mobility measurements for organic macro-ions in He versus N2 environments.

21 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5634518

From solution to the gas phase: stepwise dehydration and kinetic trapping of substance P reveals the origin of peptide conformations

21 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5634518

On the maximum charge state and proton transfer reactivity of peptide and protein ions formed by electrospray ionization

21 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5634518

Partially disordered proteins studied by ion mobility-mass spectrometry: implications for the preservation of solution phase structure in the gas phase.

21 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5634518

Ion mobilities in diatomic gases: measurement versus prediction with non-specular scattering models

21 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5634518

A computational model for protein ionization by electrospray based on gas-phase basicity.

21 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5634518

Structural characterization of drug-like compounds by ion mobility mass spectrometry: comparison of theoretical and experimentally derived nitrogen collision cross sections

21 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5634518

Chaperonin complexes monitored by ion mobility mass spectrometry

21 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5634518

Monte Carlo sampling methods using Markov chains and their applications

21 August 2018

1 reference

https://api.crossref.org/works/10.1007%2FS13361-017-1594-2

Equation of State Calculations by Fast Computing Machines

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS13361-017-1594-2

van der Waals Volumes and Radii

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS13361-017-1594-2

Stabilization and Structure of Telomeric and c-myc Region Intramolecular G-Quadruplexes: The Role of Central Cations and Small Planar Ligands

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS13361-017-1594-2

Ion mobility–mass spectrometry analysis of large protein complexes

21 January 2018

1 reference

12 December 2020

Polymer topology revealed by ion mobility coupled with mass spectrometry

1 reference

12 December 2020

Traveling-wave ion mobility mass spectrometry of protein complexes: accurate calibrated collision cross-sections of human insulin oligomers

1 reference

12 December 2020

Surface-Induced Dissociation of Homotetramers with D2 Symmetry Yields their Assembly Pathways and Characterizes the Effect of Ligand Binding

1 reference

12 December 2020

Determination of gas phase protein ion densities via ion mobility analysis with charge reduction

1 reference

12 December 2020

A local collision probability approximation for predicting momentum transfer cross sections

1 reference

12 December 2020

Protein Subunits Released by Surface Collisions of Noncovalent Complexes: Nativelike Compact Structures Revealed by Ion Mobility Mass Spectrometry

1 reference

12 December 2020

On the structural denaturation of biological analytes in trapped ion mobility spectrometry - mass spectrometry

1 reference

12 December 2020

10.1007/S13361-017-1594-2

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28194738%20AND%20SRC:MED&resulttype=core&format=json

Dimensions Publication ID

11 June 2020

0 references

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28194738%20AND%20SRC:MED&resulttype=core&format=json

11 June 2020

1 reference