Computer vision for high content screening (Q38710186)

5 September 2017

Computer vision for high content screening (English)

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5 September 2017

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2

Brendan J Frey

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5 September 2017

Oren Z Kraus

1

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5 September 2017

24 January 2016

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Critical Reviews in Biochemistry and Molecular Biology

5 September 2017

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5 September 2017

51

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5 September 2017

2

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5 September 2017

102-109

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Predicting the sequence specificities of DNA- and RNA-binding proteins by deep learning

5 September 2017

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2015.1135868

Cellular heterogeneity: do differences make a difference?

21 January 2018

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https://api.crossref.org/works/10.3109%2F10409238.2015.1135868

viSNE enables visualization of high dimensional single-cell data and reveals phenotypic heterogeneity of leukemia

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2015.1135868

Multiple instance classification: Review, taxonomy and comparative study

21 January 2018

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https://api.crossref.org/works/10.3109%2F10409238.2015.1135868

Quantitative morphological signatures define local signaling networks regulating cell morphology.

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2015.1135868

Image-based transcriptomics in thousands of single human cells at single-molecule resolution

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2015.1135868

A neural network classifier capable of recognizing the patterns of all major subcellular structures in fluorescence microscope images of HeLa cells

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2015.1135868

Identifying Important Risk Factors for Survival in Kidney Graft Failure Patients Using Random Survival Forests

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2015.1135868

A novel single-cell screening platform reveals proteome plasticity during yeast stress responses

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2015.1135868

High-content phenotypic profiling of drug response signatures across distinct cancer cells

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2015.1135868

CellProfiler: image analysis software for identifying and quantifying cell phenotypes

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2015.1135868

Systematic genome-wide screens of gene function

21 January 2018

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https://api.crossref.org/works/10.3109%2F10409238.2015.1135868

21 January 2018

Geodesic Active Contours

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https://api.crossref.org/works/10.3109%2F10409238.2015.1135868

Constraint factor graph cut-based active contour method for automated cellular image segmentation in RNAi screening

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2015.1135868

Automated image analysis of protein localization in budding yeast

21 January 2018

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https://api.crossref.org/works/10.3109%2F10409238.2015.1135868

Yeast Proteome Dynamics from Single Cell Imaging and Automated Analysis.

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2015.1135868

Accurate cell segmentation in microscopy images using membrane patterns.

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2015.1135868

Biological imaging software tools

21 January 2018

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https://api.crossref.org/works/10.3109%2F10409238.2015.1135868

Clustering by passing messages between data points

21 January 2018

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https://api.crossref.org/works/10.3109%2F10409238.2015.1135868

Clustering phenotype populations by genome-wide RNAi and multiparametric imaging.

21 January 2018

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https://api.crossref.org/works/10.3109%2F10409238.2015.1135868

Bioconductor: open software development for computational biology and bioinformatics

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2015.1135868

CellCognition: time-resolved phenotype annotation in high-throughput live cell imaging.

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2015.1135868

Deep Neural Networks for Acoustic Modeling in Speech Recognition: The Shared Views of Four Research Groups

21 January 2018

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https://api.crossref.org/works/10.3109%2F10409238.2015.1135868

Machine learning improves the precision and robustness of high-content screens: using nonlinear multiparametric methods to analyze screening results.

21 January 2018

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https://api.crossref.org/works/10.3109%2F10409238.2015.1135868

Phenomics: the next challenge

21 January 2018

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https://api.crossref.org/works/10.3109%2F10409238.2015.1135868

Scoring diverse cellular morphologies in image-based screens with iterative feedback and machine learning

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2015.1135868

CellProfiler Analyst: data exploration and analysis software for complex image-based screens

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2015.1135868

Snakes: Active contour models

21 January 2018

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https://api.crossref.org/works/10.3109%2F10409238.2015.1135868

Temporal clustering by affinity propagation reveals transcriptional modules in Arabidopsis thaliana

21 January 2018

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https://api.crossref.org/works/10.3109%2F10409238.2015.1135868

Integration of high-content screening and untargeted metabolomics for comprehensive functional annotation of natural product libraries

21 January 2018

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https://api.crossref.org/works/10.3109%2F10409238.2015.1135868

Cellular imaging in drug discovery

21 January 2018

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https://api.crossref.org/works/10.3109%2F10409238.2015.1135868

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2015.1135868

Gradient-based learning applied to document recognition

21 January 2018

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https://api.crossref.org/works/10.3109%2F10409238.2015.1135868

Clustering by soft-constraint affinity propagation: applications to gene-expression data

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2015.1135868

Deep learning of the tissue-regulated splicing code

21 January 2018

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https://api.crossref.org/works/10.3109%2F10409238.2015.1135868

Single-cell and multivariate approaches in genetic perturbation screens

21 January 2018

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https://api.crossref.org/works/10.3109%2F10409238.2015.1135868

Comparison of methods for image-based profiling of cellular morphological responses to small-molecule treatment

21 January 2018

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https://api.crossref.org/works/10.3109%2F10409238.2015.1135868

Annotated high-throughput microscopy image sets for validation

21 January 2018

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https://api.crossref.org/works/10.3109%2F10409238.2015.1135868

Deep neural nets as a method for quantitative structure-activity relationships

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2015.1135868

Deformable models in medical image analysis: a survey

21 January 2018

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https://api.crossref.org/works/10.3109%2F10409238.2015.1135868

Phenotypic screening in cancer drug discovery - past, present and future

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2015.1135868

CellOrganizer: Image-derived models of subcellular organization and protein distribution

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2015.1135868

Multidimensional quantification of subcellular morphology of Saccharomyces cerevisiae using CalMorph, the high-throughput image-processing program.

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2015.1135868

Toward automatic phenotyping of developing embryos from videos.

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2015.1135868

Multidimensional drug profiling by automated microscopy.

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2015.1135868

PhenoRipper: software for rapidly profiling microscopy images

21 January 2018

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https://api.crossref.org/works/10.3109%2F10409238.2015.1135868

CellClassifier: supervised learning of cellular phenotypes

21 January 2018

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https://api.crossref.org/works/10.3109%2F10409238.2015.1135868

Learning representations by back-propagating errors

21 January 2018

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https://api.crossref.org/works/10.3109%2F10409238.2015.1135868

ImageNet Large Scale Visual Recognition Challenge

21 January 2018

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https://api.crossref.org/works/10.3109%2F10409238.2015.1135868

A review of feature selection techniques in bioinformatics

21 January 2018

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https://api.crossref.org/works/10.3109%2F10409238.2015.1135868

High-throughput functional genomics using CRISPR-Cas9.

21 January 2018

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https://api.crossref.org/works/10.3109%2F10409238.2015.1135868

Pattern recognition software and techniques for biological image analysis

21 January 2018

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https://api.crossref.org/works/10.3109%2F10409238.2015.1135868

Wndchrm - an open source utility for biological image analysis

21 January 2018

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https://api.crossref.org/works/10.3109%2F10409238.2015.1135868

Automated image analysis for high-content screening and analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2015.1135868

Patterns of basal signaling heterogeneity can distinguish cellular populations with different drug sensitivities

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2015.1135868

Increasing the Content of High-Content Screening: An Overview

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2015.1135868

Machine learning in cell biology - teaching computers to recognize phenotypes

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2015.1135868

Dissecting DNA damage response pathways by analysing protein localization and abundance changes during DNA replication stress

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2015.1135868

Systematic genetic analysis with ordered arrays of yeast deletion mutants

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2015.1135868

Global mapping of the yeast genetic interaction network

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2015.1135868

Integrating high-throughput genetic interaction mapping and high-content screening to explore yeast spindle morphogenesis

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2015.1135868

An image analysis toolbox for high-throughput C. elegans assays

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2015.1135868

RNA splicing. The human splicing code reveals new insights into the genetic determinants of disease

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2015.1135868

A screen for morphological complexity identifies regulators of switch-like transitions between discrete cell shapes

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2015.1135868

Integrating high-content screening and ligand-target prediction to identify mechanism of action

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2015.1135868

Unsupervised modeling of cell morphology dynamics for time-lapse microscopy

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2015.1135868

10.3109/10409238.2015.1135868

21 January 2018

Identifiers

DOI

1 reference

5 September 2017

1 reference

PubMed ID

26806341