The Gene Ontology Annotation (GOA) project: implementation of GO in SWISS-PROT, TrEMBL, and InterPro (Q38522863)

3 September 2017

The Gene Ontology Annotation (GOA) project: implementation of GO in SWISS-PROT, TrEMBL, and InterPro (English)

1 reference

3 September 2017

0 references

1 reference

6

1 reference

3 September 2017

11

1 reference

3 September 2017

Michele Magrane

2

0 references

Nicola Mulder

object named as

Nicola Mulder

series ordinal

7

0 references

David Binns

series ordinal

4

object named as

David Binns

1 reference

3 September 2017

8

Tom Oinn

1 reference

3 September 2017

9

John Maslen

1 reference

3 September 2017

5

Wolfgang Fleischmann

1 reference

3 September 2017

3

Daniel Barrell

1 reference

3 September 2017

Evelyn Camon

1

1 reference

3 September 2017

Anthony Cox

series ordinal

10

1 reference

3 September 2017

12 March 2003

1 reference

3 September 2017

language of work or name

English

0 references

number of pages

11

1 reference

based on heuristic

inferred from page(s)

published in

Genome Research

1 reference

3 September 2017

13

1 reference

3 September 2017

4

1 reference

3 September 2017

662-672

1 reference

The EMBL Nucleotide Sequence Database: major new developments

3 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430163

PROSITE: a documented database using patterns and profiles as motif descriptors

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430163

Predicting gene ontology functions from ProDom and CDD protein domains

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430163

The EBI SRS server--recent developments

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430163

The Pfam protein families database

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430163

The Protein Data Bank: unifying the archive

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430163

Recent improvements to the SMART domain-based sequence annotation resource

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430163

The PROSITE database, its status in 2002

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430163

Saccharomyces Genome Database (SGD) provides secondary gene annotation using the Gene Ontology (GO)

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430163

The Ensembl genome database project

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430163

Creating the gene ontology resource: design and implementation

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430163

Program description: Strategies for biological annotation of mammalian systems: implementing gene ontologies in mouse genome informatics.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430163

RefSeq and LocusLink: NCBI gene-centered resources

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430163

Proteome Analysis Database: online application of InterPro and CluSTr for the functional classification of proteins in whole genomes

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430163

TIGRFAMs: a protein family resource for the functional identification of proteins

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430163

The InterPro database, an integrated documentation resource for protein families, domains and functional sites

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430163

CluSTr: a database of clusters of SWISS-PROT+TrEMBL proteins

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430163

The ENZYME database in 2000

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430163

The SWISS-PROT protein sequence database and its supplement TrEMBL in 2000.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430163

The HSSP database of protein structure-sequence alignments and family profiles

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430163

Cloning and expression of murine IL-12

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430163

PRINTS and PRINTS-S shed light on protein ancestry

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430163

The Mouse Genome Database (MGD): the model organism database for the laboratory mouse

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430163

ProDom and ProDom-CG: tools for protein domain analysis and whole genome comparisons

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430163

TEMBLOR - Perspectives of EBI Database Services

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430163

The FlyBase database of the Drosophila genome projects and community literature

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430163

The evolution of haematopoietic cytokine/receptor complexes

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=430163

Functional information in SWISS-PROT: The basis for large-scale characterisation of protein sequences

31 August 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/12654719

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

A novel method for automatic functional annotation of proteins

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/12654719

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

The Molecular Biology Database Collection: 2003 update

1 reference

COCI

https://opencitations.net/index/api/v1/references/10.1101/GR.461403

27 February 2026

Identifiers

DOI

10.1101/GR.461403

1 reference

3 September 2017

1 reference

3 September 2017

PubMed publication ID

12654719

1 reference