Developmental fate and cellular maturity encoded in human regulatory DNA landscapes (Q38394827)

2 September 2017

Developmental fate and cellular maturity encoded in human regulatory DNA landscapes (English)

1 reference

2 September 2017

10

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2 September 2017

11

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2 September 2017

John Stamatoyannopoulos

15

object named as

John A Stamatoyannopoulos

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2 September 2017

7

Benjamin Vernot

1 reference

2 September 2017

14

Joshua M Akey

1 reference

2 September 2017

Andrew B Stergachis

1

1 reference

2 September 2017

Shane Neph

2

1 reference

2 September 2017

Alex Reynolds

3

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2 September 2017

Richard Humbert

4

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2 September 2017

Brady Miller

5

1 reference

2 September 2017

Sharon L Paige

6

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2 September 2017

Jeffrey B Cheng

8

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2 September 2017

Robert E Thurman

9

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2 September 2017

Shelly Heimfeld

12

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2 September 2017

Charles E Murry

13

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2 September 2017

language of work or name

English

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publication date

1 August 2013

1 reference

2 September 2017

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2 September 2017

154

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2 September 2017

4

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2 September 2017

888-903

1 reference

Genome-wide chromatin state transitions associated with developmental and environmental cues

2 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3962256

Foxp3 exploits a pre-existent enhancer landscape for regulatory T cell lineage specification

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3962256

A temporal chromatin signature in human embryonic stem cells identifies regulators of cardiac development

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3962256

Personal and population genomics of human regulatory variation

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3962256

An expansive human regulatory lexicon encoded in transcription factor footprints

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3962256

The accessible chromatin landscape of the human genome

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3962256

BEDOPS: high-performance genomic feature operations

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3962256

A phylogenetically based transcriptome age index mirrors ontogenetic divergence patterns

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3962256

Gene expression divergence recapitulates the developmental hourglass model

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3962256

Epigenetic memory in induced pluripotent stem cells

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3962256

Distinct epigenomic landscapes of pluripotent and lineage-committed human cells.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3962256

The basic leucine zipper transcription factor E4BP4 is essential for natural killer cell development.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3962256

Global mapping of protein-DNA interactions in vivo by digital genomic footprinting

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3962256

Upregulation of SOX9 inhibits the growth of human and mouse melanomas and restores their sensitivity to retinoic acid

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3962256

Pbx1 functions in distinct regulatory networks to pattern the great arteries and cardiac outflow tract

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3962256

Mediators of reprogramming: transcription factors and transitions through mitosis

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3962256

Human cardiovascular progenitor cells develop from a KDR+ embryonic-stem-cell-derived population

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3962256

On the use of the word 'epigenetic'.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3962256

In vivo enhancer analysis of human conserved non-coding sequences

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3962256

A bivalent chromatin structure marks key developmental genes in embryonic stem cells

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3962256

Chromosome-wide mapping of estrogen receptor binding reveals long-range regulation requiring the forkhead protein FoxA1

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3962256

An ontology for cell types

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3962256

On the Origin of Cancer Cells

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3962256

DNA methylation patterns and epigenetic memory

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3962256

Nkx2.5 and Nkx2.6, homologs of Drosophila tinman, are required for development of the pharynx

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3962256

Myogenic and morphogenetic defects in the heart tubes of murine embryos lacking the homeo box gene Nkx2-5

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3962256

How the lambda repressor and cro work

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3962256

Nuclease hypersensitive sites in chromatin

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3962256

Epigenomic enhancer profiling defines a signature of colon cancer

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3962256

Chromatin accessibility pre-determines glucocorticoid receptor binding patterns.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3962256

Transcription factors and hematopoietic development

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3962256

Circuitry and dynamics of human transcription factor regulatory networks

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3962256

Dynamics and memory of heterochromatin in living cells.

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3962256

Regulated noise in the epigenetic landscape of development and disease

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3962256

Dynamic and coordinated epigenetic regulation of developmental transitions in the cardiac lineage

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3962256

Generation of a mouse line expressing Sox17-driven Cre recombinase with specific activity in arteries.

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3962256

The Drosophila Fab-7 chromosomal element conveys epigenetic inheritance during mitosis and meiosis.

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3962256

Nuclear localization and DNA binding properties of a protein expressed by human c-myc oncogene.

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3962256

Propagation of globin DNAase i-hypersensitive sites in absence of factors required for induction: A possible mechanism for determination

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3962256

Prediction of prognosis for prostatic adenocarcinoma by combined histological grading and clinical staging

31 August 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23953118

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Temporal colinearity and the phylotypic progression: a basis for the stability of a vertebrate Bauplan and the evolution of morphologies through heterochrony

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23953118

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

DETECTION OF EMBRYO-SPECIFIC ALPHA-GLOBULIN IN THE BLOOD SERUM OF A PATIENT WITH PRIMARY LIVER CANCER

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23953118

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

On Computable Numbers, with an Application to the Entscheidungsproblem

1 reference

COCI

https://opencitations.net/index/coci/api/v1/citations/10.1112/PLMS/S2-42.1.230

10.1016/J.CELL.2013.07.020

13 November 2021

Identifiers

DOI

1 reference

2 September 2017

1 reference

2 September 2017

1 reference