BEARR: Batch Extraction and Analysis of cis-Regulatory Regions (Q38339712)

2 September 2017

BEARR: Batch Extraction and Analysis of cis-Regulatory Regions (English)

1 reference

2 September 2017

5

1 reference

2 September 2017

Vinsensius B Vega

1

1 reference

2 September 2017

Dhinoth Kumar Bangarusamy

series ordinal

2

1 reference

2 September 2017

Lance D Miller

series ordinal

3

1 reference

2 September 2017

Edison T Liu

series ordinal

4

1 reference

2 September 2017

language of work or name

English

0 references

publication date

1 July 2004

1 reference

2 September 2017

Nucleic Acids Research

1 reference

2 September 2017

32

1 reference

2 September 2017

Web Server issue

1 reference

2 September 2017

W257-60

1 reference

Toucan: deciphering the cis-regulatory logic of coregulated genes.

2 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=441534

EZ-Retrieve: a web-server for batch retrieval of coordinate-specified human DNA sequences and underscoring putative transcription factor-binding sites

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=441534

An algorithm for finding protein-DNA binding sites with applications to chromatin-immunoprecipitation microarray experiments

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=441534

DBTSS: DataBase of human Transcriptional Start Sites and full-length cDNAs

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=441534

Transcription Regulatory Regions Database (TRRD): its status in 2002.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=441534

BioProspector: discovering conserved DNA motifs in upstream regulatory regions of co-expressed genes.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=441534

RefSeq and LocusLink: NCBI gene-centered resources

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=441534

TRANSFAC: a database on transcription factors and their DNA binding sites

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=441534

Status of the transcription factors database (TFD).

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=441534

Fitting a mixture model by expectation maximization to discover motifs in biopolymers

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=441534

Regulatory element detection using correlation with expression.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=441534

Consensus patterns in DNA.

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=441534

23 June 2018

The promoter connection

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/15215391

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/NAR/GKH396

1 reference

2 September 2017

journals/nar/VegaBMLL04

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

2 September 2017

1 reference