Global gene expression profiling in Escherichia coli K12: effects of oxygen availability and ArcA. (Q38330855)

2 September 2017

Global gene expression profiling in Escherichia coli K12: effects of oxygen availability and ArcA. (English)

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2 September 2017

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5

Pierre Baldi

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2 September 2017

6

G Wesley Hatfield

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2 September 2017

Kirsty A Salmon

1

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2 September 2017

She-pin Hung

2

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2 September 2017

Nicholas R Steffen

3

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2 September 2017

Rebecca Krupp

4

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2 September 2017

Robert P Gunsalus

7

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2 September 2017

language of work or name

English

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publication date

7 February 2005

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Journal of Biological Chemistry

2 September 2017

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2 September 2017

280

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2 September 2017

15084-15096

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2 September 2017

15

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Global gene expression profiling in Escherichia coli K12. The effects of oxygen availability and FNR.

2 September 2017

1 reference

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The complete genome sequence of Escherichia coli K-12

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Aerobic-anaerobic gene regulation in Escherichia coli: control by the ArcAB and Fnr regulons

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Enzymological and physiological consequences of restructuring the lipoyl domain content of the pyruvate dehydrogenase complex of Escherichia coli.

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Mechanisms for redox control of gene expression

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Aerobic regulation of the sucABCD genes of Escherichia coli, which encode alpha-ketoglutarate dehydrogenase and succinyl coenzyme A synthetase: roles of ArcA, Fnr, and the upstream sdhCDAB promoter

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Regulation of malate dehydrogenase (mdh) gene expression in Escherichia coli in response to oxygen, carbon, and heme availability

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Oxygen, iron, carbon, and superoxide control of the fumarase fumA and fumC genes of Escherichia coli: role of the arcA, fnr, and soxR gene products

21 January 2018

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Regulation of the citrate synthase (gltA) gene of Escherichia coli in response to anaerobiosis and carbon supply: role of the arcA gene product

21 January 2018

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Regulation of succinate dehydrogenase (sdhCDAB) operon expression in Escherichia coli in response to carbon supply and anaerobiosis: role of ArcA and Fnr.

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Cytochrome o (cyoABCDE) and d (cydAB) oxidase gene expression in Escherichia coli is regulated by oxygen, pH, and the fnr gene product

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Oxygen, nitrate, and molybdenum regulation of dmsABC gene expression in Escherichia coli

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Aerobic regulation of cytochrome d oxidase (cydAB) operon expression in Escherichia coli: roles of Fnr and ArcA in repression and activation

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Oxygen regulation of the Escherichia coli cytochrome d oxidase (cydAB) operon: roles of multiple promoters and the Fnr-1 and Fnr-2 binding sites

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Purification of ArcA and analysis of its specific interaction with the pfl promoter-regulatory region

21 January 2018

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Expression of ptsG encoding the major glucose transporter is regulated by ArcA in Escherichia coli

21 January 2018

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Anaerobic induction of pyruvate formate-lyase gene expression is mediated by the ArcA and FNR proteins

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Probing the ArcA-P modulon of Escherichia coli by whole genome transcriptional analysis and sequence recognition profiling.

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Global gene expression profiling in Escherichia coli K12. The effects of leucine-responsive regulatory protein

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Differential analysis of DNA microarray gene expression data

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Improved statistical inference from DNA microarray data using analysis of variance and a Bayesian statistical framework. Analysis of global gene expression in Escherichia coli K12.

21 January 2018

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A Bayesian framework for the analysis of microarray expression data: regularized t -test and statistical inferences of gene changes

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Transcriptional control mediated by the ArcA two-component response regulator protein of Escherichia coli: characterization of DNA binding at target promoters

21 January 2018

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Combining evidence using p-values: application to sequence homology searches

21 January 2018

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RegulonDB (version 4.0): transcriptional regulation, operon organization and growth conditions in Escherichia coli K-12

21 January 2018

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Aerobic regulation of isocitrate dehydrogenase gene (icd) expression in Escherichia coli by the arcA and fnr gene products

21 January 2018

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Role of multiple ArcA recognition sites in anaerobic regulation of succinate dehydrogenase (sdhCDAB) gene expression in Escherichia coli

21 January 2018

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The gene locus of the proton-translocating NADH: ubiquinone oxidoreductase in Escherichia coli. Organization of the 14 genes and relationship between the derived proteins and subunits of mitochondrial complex I.

21 January 2018

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Transcriptional co-activation at the ansB promoters: involvement of the activating regions of CRP and FNR when bound in tandem.

21 January 2018

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Anaerobic activation of arcA transcription in Escherichia coli: roles of Fnr and ArcA.

21 January 2018

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Collaborative regulation of Escherichia coli glutamate-dependent acid resistance by two AraC-like regulators, GadX and GadW (YhiW)

21 January 2018

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pH-Dependent Modulation of Cyclic AMP Levels and GadW-Dependent Repression of RpoS Affect Synthesis of the GadX Regulator andEscherichia coliAcid Resistance

21 January 2018

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Regulatory network of acid resistance genes in Escherichia coli

21 January 2018

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Functional characterization and regulation of gadX, a gene encoding an AraC/XylS-like transcriptional activator of the Escherichia coli glutamic acid decarboxylase system

21 January 2018

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Requirement for terminal cytochromes in generation of the aerobic signal for the arc regulatory system in Escherichia coli: study utilizing deletions and lac fusions of cyo and cyd

21 January 2018

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Effect of microaerophilic cell growth conditions on expression of the aerobic (cyoABCDE and cydAB) and anaerobic (narGHJI, frdABCD, and dmsABC) respiratory pathway genes in Escherichia coli

21 January 2018

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Interplay between three global regulatory proteins mediates oxygen regulation of the Escherichia coli cytochrome d oxidase (cydAB) operon.

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Regulation of Escherichia coli fumarate reductase (frdABCD) operon expression by respiratory electron acceptors and the fnr gene product

21 January 2018

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Molecular genetic analysis of an FNR-dependent anaerobically inducible Escherichia coli promoter.

21 January 2018

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Mutational analysis of the nucleotide sequence at the FNR-dependent nirB promoter in Escherichia coli.

21 January 2018

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Oxygen- and growth rate-dependent regulation of Escherichia coli fumarase (FumA, FumB, and FumC) activity

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Control of Escherichia coli lysyl-tRNA synthetase expression by anaerobiosis

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Identifiers

DOI

10.1074/JBC.M414030200

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2 September 2017

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