Counting and size classification of active soil bacteria by fluorescence in situ hybridization with an rRNA oligonucleotide probe. (Q38326412)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10103277%20AND%20SRC:MED&resulttype=core&format=json

12 November 2019

title

Counting and size classification of active soil bacteria by fluorescence in situ hybridization with an rRNA oligonucleotide probe (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10103277%20AND%20SRC:MED&resulttype=core&format=json

12 November 2019

1 reference

Christensen H

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10103277%20AND%20SRC:MED&resulttype=core&format=json

12 November 2019

Hansen M

series ordinal

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10103277%20AND%20SRC:MED&resulttype=core&format=json

12 November 2019

Sorensen J

series ordinal

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10103277%20AND%20SRC:MED&resulttype=core&format=json

12 November 2019

language of work or name

English

0 references

publication date

1 April 1999

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10103277%20AND%20SRC:MED&resulttype=core&format=json

Applied and Environmental Microbiology

12 November 2019

published in

1 reference

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12 November 2019

volume

65

1 reference

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12 November 2019

issue

4

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12 November 2019

page(s)

1753-1761

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10103277%20AND%20SRC:MED&resulttype=core&format=json

describes a project that uses

12 November 2019

fluorescence in situ hybridization

1 reference

Determination of Active Marine Bacterioplankton: a Comparison of Universal 16S rRNA Probes, Autoradiography, and Nucleoid Staining

inferred from title

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=91247

Fully automatic determination of soil bacterium numbers, cell volumes, and frequencies of dividing cells by confocal laser scanning microscopy and image analysis.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=91247

Microflora of soil as viewed by transmission electron microscopy

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=91247

Viability of indigenous soil bacteria assayed by respiratory activity and growth.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=91247

Estimating the growth rate of slowly growing marine bacteria from RNA content

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=91247

Metabolic status of bacteria and fungi in the rhizosphere of ponderosa pine seedlings.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=91247

Impact of culture-independent studies on the emerging phylogenetic view of bacterial diversity.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=91247

Analysis of fluorescent pseudomonads based on 23S ribosomal DNA sequences

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=91247

Optimizing fluorescent in situ hybridization with rRNA-targeted oligonucleotide probes for flow cytometric identification of microorganisms

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=91247

Phylogenetic identification and in situ detection of individual microbial cells without cultivation

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=91247

Use of phylogenetically based hybridization probes for studies of ruminal microbial ecology

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=91247

Phylogenetic stains: ribosomal RNA-based probes for the identification of single cells

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=91247

Role of ribosome degradation in the death of starved Escherichia coli cells

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=91247

Fluorescent-oligonucleotide probing of whole cells for determinative, phylogenetic, and environmental studies in microbiology

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=91247

Detection of micro-organisms in soil after in situ hybridization with rRNA-targeted, fluorescently labelled oligonucleotides

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=91247

Rates of formation and thermal stabilities of RNA:DNA and DNA:DNA duplexes at high concentrations of formamide

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=91247

Use of rRNA fluorescence in situ hybridization for measuring the activity of single cells in young and established biofilms.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=91247

Microbial Community Composition of Wadden Sea Sediments as Revealed by Fluorescence In Situ Hybridization.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=91247

The transient phase between growth and nongrowth of heterotrophic bacteria, with emphasis on the marine environment

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=91247

Detection of mRNA in streptomyces cells by whole-cell hybridization with digoxigenin-labeled probes

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=91247

Whole-Cell Hybridization of Frankia Strains with Fluorescence- or Digoxigenin-Labeled, 16S rRNA-Targeted Oligonucleotide Probes

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=91247

The relationship between cell size and viability of soil bacteria

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=91247

Thymidine and leucine incorporation in soil bacteria with different cell size

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=91247

Effects of stress treatments on the detection of Salmonella typhimurium by in situ hybridization.

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=91247

A comparison of a direct- and a plate counting technique for the quantitative estimation of soil micro-organisms

31 August 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/10103277

12 December 2020

inferred from PubMed ID database lookup

Thymidine incorporation of bacteria sequentially extracted from soil using repeated homogenization-centrifugation

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/10103277

12 December 2020

inferred from PubMed ID database lookup

In situ probing of gram-positive bacteria with high DNA G + C content using 23S rRNA-targeted oligonucleotides

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/10103277

12 December 2020

inferred from PubMed ID database lookup

Identifiers

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10103277%20AND%20SRC:MED&resulttype=core&format=json

12 November 2019

1 reference