Transcriptome analysis of the Aspergillus nidulans AtmA (ATM, Ataxia-Telangiectasia mutated) null mutant. (Q38298177)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17880424%20AND%20SRC:MED&resulttype=core&format=json

7 January 2020

title

Transcriptome analysis of the Aspergillus nidulans AtmA (ATM, Ataxia-Telangiectasia mutated) null mutant (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17880424%20AND%20SRC:MED&resulttype=core&format=json

Homologous to ccg-1 from N. crassa

7 January 2020

main subject

transcriptome

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Ortholog(s) have role in GPI anchor biosynthetic process, fungal-type cell wall organization and cellular bud neck, cellular bud tip, endoplasmic reticulum, integral component of plasma membrane localization

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Ortholog(s) have intracellular localization

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Ortholog(s) have role in reciprocal meiotic recombination and endoplasmic reticulum, mitochondrion, nuclear envelope, plasma membrane localization

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Ortholog of A. fumigatus Af293 : Afu3g10500, A. niger CBS 513.88 : An16g04440, A. oryzae RIB40 : AO090003000596, Aspergillus wentii : Aspwe1_0049228 and Aspergillus sydowii : Aspsy1_0146146

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Ortholog(s) have protein serine/threonine kinase activity

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Subunit of the SAGA transcriptional regulatory complex

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Ortholog(s) have RNA binding activity, role in tRNA modification and cytoplasm, nucleus localization

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Ortholog(s) have cell division site, cytosol, nucleus localization

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Putative transcription factor of unknown function

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Ortholog(s) have copper chaperone activity, role in intracellular copper ion transport, mitochondrial respiratory chain complex IV assembly and cytosol, mitochondrial intermembrane space, nucleus localization

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Ortholog(s) have phosphopantothenate--cysteine ligase activity, role in acetyl-CoA biosynthetic process from pantothenate, coenzyme A biosynthetic process and CoA-synthesizing protein complex, cytosol, nucleus localization

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Ortholog of A. niger CBS 513.88 : An02g13620, A. oryzae RIB40 : AO090020000221, Aspergillus versicolor : Aspve1_0128410, Aspergillus niger ATCC 1015 : 47169-mRNA and Aspergillus sydowii : Aspsy1_0029739

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60S ribosomal protein L21

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Predicted Rho GTPase activating protein

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Rho GTPase protein required for normal colony growth and conidiophore development

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Myosin II

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Ortholog of A. fumigatus Af293 : Afu5g08920, A. niger CBS 513.88 : An07g04290, A. oryzae RIB40 : AO090020000494, Aspergillus wentii : Aspwe1_0167662 and Aspergillus sydowii : Aspsy1_0091330

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Ortholog(s) have role in asexual sporulation resulting in formation of a cellular spore, cellular response to drug and cell septum, cell surface localization

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allantoinase

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Putative condensin subunit, ortholog S. cerevisiae Smc4p

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Ortholog(s) have 2-octoprenyl-3-methyl-6-methoxy-1,4-benzoquinone hydroxylase activity, role in ubiquinone biosynthetic process and mitochondrial inner membrane localization

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Ortholog(s) have ATP binding, ATPase activity, metallopeptidase activity, role in protein complex assembly, signal peptide processing and m-AAA complex, mitochondrial inner boundary membrane localization

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Ortholog(s) have role in maintenance of rDNA, mitotic DNA replication, mitotic sister chromatid segregation, postreplication repair and RecQ helicase-Topo III complex, mitochondrion, nucleus, site of double-strand break localization

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Ortholog of A. fumigatus Af293 : Afu2g02730, A. niger CBS 513.88 : An07g07060, A. oryzae RIB40 : AO090026000848, Aspergillus wentii : Aspwe1_0168873 and Aspergillus sydowii : Aspsy1_0091100

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Glycosidase CRH1, putative

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Microtubule (MT) depolymerase

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protein kinase, putative

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Ortholog of A. fumigatus Af293 : Afu4g07430, A. niger CBS 513.88 : An04g01810, Aspergillus wentii : Aspwe1_0034603, Aspergillus sydowii : Aspsy1_0163077 and Aspergillus terreus NIH2624 : ATET_05464

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Ortholog(s) have polyubiquitin binding, sterol binding activity and role in anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process, mitotic sister chromatid segregation, proteasome localization

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Putative ribonucleotide reductase large chain with a predicted role in nucleotide salvage pathways

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Ortholog of A. fumigatus Af293 : Afu4g06040, A. niger CBS 513.88 : An04g00270, A. oryzae RIB40 : AO090023000991, Aspergillus wentii : Aspwe1_0101375 and Aspergillus sydowii : Aspsy1_0036593

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Ortholog(s) have cyclin-dependent protein serine/threonine kinase inhibitor activity

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Ortholog(s) have mitochondrion localization

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Forkhead-like transcription factor

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Extragenic suppressor of a crzA null mutation

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Hydrophobin

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Ortholog(s) have structural molecule activity and mitochondrial large ribosomal subunit localization

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Has domain(s) with predicted DNA binding, nucleic acid binding activity

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Ortholog(s) have ubiquitin-specific protease activity, role in protein deubiquitination and nucleoplasm localization

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Putative alpha,alpha-trehalose-phosphate synthase (UDP-forming) with a predicted role in trehalose biosynthesis

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Putative beta-1,4-xylosidase

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Putative glycogen (starch) synthase with a predicted role in glycogen biosynthesis

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Ortholog(s) have role in cellular response to drug, hexose transport, pathogenesis

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Ortholog(s) have cytoplasm, nucleus localization

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Regulatory protein involved in nitrogen metabolite repression

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Ortholog(s) have role in heterochromatin maintenance, homologous recombination-dependent replication fork processing and CAF-1 complex, nuclear replication fork localization

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Ortholog of A. fumigatus Af293 : Afu5g03730, A. niger CBS 513.88 : An09g06430, A. oryzae RIB40 : AO090102000583, Aspergillus wentii : Aspwe1_0114603 and Aspergillus sydowii : Aspsy1_0161802

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Coiled-coil protein associated with spindle pole body, involved in septation

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Oxidosqualene-lanosterol cyclase, putative

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90 kilodalton heat shock protein

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Has domain(s) with predicted GTP binding activity and role in cell cycle

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14-alpha sterol demethylase, putative

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Kinesin, CENP-E family

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Ortholog(s) have trimethyllysine dioxygenase activity, role in carnitine biosynthetic process, mitochondrion organization and mitochondrion localization

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Arginine methyltransferase

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Has domain(s) with predicted RNA polymerase II transcription cofactor activity, role in regulation of transcription from RNA polymerase II promoter and mediator complex localization

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arrestin domain-containing protein

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Ortholog(s) have role in ascospore formation, cellular response to calcium ion, fungal-type cell wall organization or biogenesis and cell cortex, cell division site, cell septum, cytosol localization

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Histidine kinase, histidine-containing phosphotransfer protein

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Has domain(s) with predicted oxidoreductase activity and role in oxidation-reduction process

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Putative C-14 sterol reductase with a predicted role in sterol metabolism

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Ortholog of A. fumigatus Af293 : Afu1g05490, A. niger CBS 513.88 : An18g04300, A. oryzae RIB40 : AO090009000396, Aspergillus wentii : Aspwe1_0169302 and Aspergillus sydowii : Aspsy1_0057624

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Has domain(s) with predicted oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors activity

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Ortholog(s) have role in negative regulation of helicase activity and MCM complex, cytosol, nuclear chromatin localization

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Component of AnCP/AnCF CCAAT-binding complex

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Protein expressed at increased levels during osmoadaptation

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Ortholog of A. fumigatus Af293 : Afu1g03650, A. niger CBS 513.88 : An18g04060, A. oryzae RIB40 : AO090003000980, Aspergillus wentii : Aspwe1_0169329 and Aspergillus sydowii : Aspsy1_0149715

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Has domain(s) with predicted hydrolase activity

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Ortholog of Aspergillus wentii : Aspwe1_0168245, Aspergillus clavatus NRRL 1 : ACLA_062140 and Aspergillus aculeatus ATCC16872 : Aacu16872_043723

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Putative phosphogluconate dehydrogenase (decarboxylating) with a predicted role in the pentose-phosphate shunt

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Ortholog(s) have rDNA binding activity, role in transcription of nuclear large rRNA transcript from RNA polymerase I promoter and cytosol, nucleolus localization

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Protein tyrosine phosphatase involved in cell cycle control

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Ortholog(s) have aminopeptidase activity, role in protein catabolic process in the vacuole and fungal-type vacuole localization

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Ortholog of A. niger CBS 513.88 : An04g04400, A. oryzae RIB40 : AO090001000062, Neosartorya fischeri NRRL 181 : NFIA_045750 and Aspergillus wentii : Aspwe1_0024862, Aspwe1_0046487

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Has domain(s) with predicted substrate-specific transmembrane transporter activity, transmembrane transporter activity, role in transmembrane transport and integral component of membrane, membrane localization

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Ortholog of A. fumigatus Af293 : Afu4g08090, A. niger CBS 513.88 : An04g02530, A. oryzae RIB40 : AO090023000760, Aspergillus wentii : Aspwe1_0064360 and Aspergillus sydowii : Aspsy1_0057405

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Ortholog of A. fumigatus Af293 : Afu4g08100, A. niger CBS 513.88 : An04g02540, A. oryzae RIB40 : AO090023000759, Aspergillus wentii : Aspwe1_0100434 and Aspergillus sydowii : Aspsy1_0044293

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3-hydroxy-3-methylglutaryl-CoA reductase, putative

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Ortholog(s) have CTD phosphatase activity, protein tyrosine phosphatase activity

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Ortholog of Neosartorya fischeri NRRL 181 : NFIA_080720, Aspergillus wentii : Aspwe1_0110971, Aspergillus versicolor : Aspve1_0083942 and Aspergillus clavatus NRRL 1 : ACLA_090600

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Ortholog(s) have cytoplasm localization

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Transcript induced in response to calcium dichloride in a CrzA-dependent manner

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Has domain(s) with predicted role in signal transduction and intracellular localization

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Has domain(s) with predicted oxidoreductase activity and role in metabolic process

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Has domain(s) with predicted ADP binding, catalytic activity, microtubule motor activity, role in nucleoside metabolic process and kinesin complex localization

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Ortholog(s) have carbohydrate binding activity

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PHD finger domain-containing protein

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Putative peroxin with a predicted role in peroxisome biogenesis

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Putative C-8,7 sterol isomerase with a predicted role in ergosterol biosynthesis

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Has domain(s) with predicted DNA binding, chromatin binding activity

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Alpha-galactosidase

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Ortholog(s) have role in nucleobase-containing compound transport and plasma membrane localization

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Has domain(s) with predicted role in transmembrane transport and integral component of membrane localization

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Ortholog of A. fumigatus Af293 : Afu4g03820, A. niger CBS 513.88 : An14g01070, A. oryzae RIB40 : AO090011000344, Aspergillus wentii : Aspwe1_0115647 and Aspergillus sydowii : Aspsy1_0048914

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Predicted aminopeptidase

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fumarylacetoacetate hydrolase family protein

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Ortholog of A. fumigatus Af293 : Afu4g04090, A. niger CBS 513.88 : An14g00760, A. oryzae RIB40 : AO090206000113, Aspergillus wentii : Aspwe1_0613920 and Aspergillus sydowii : Aspsy1_0158081

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Ortholog of A. fumigatus Af293 : Afu4g04318, A. niger CBS 513.88 : An14g00530, Aspergillus wentii : Aspwe1_0053203, Aspergillus sydowii : Aspsy1_0184132 and Aspergillus terreus NIH2624 : ATET_02726

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3-hydroxyacyl-CoA dehydrogenase, mitochondrial, putative

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Ortholog(s) have role in ER to Golgi vesicle-mediated transport, cellular response to drug, vesicle fusion with Golgi apparatus

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Putative ribulokinase with a predicted role in ribulose metabolism

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Putative phosphotyrosine-specific protein phosphatase of the HOG signaling pathway that regulates osmotic stress response

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Ortholog(s) have role in CENP-A containing nucleosome assembly, chromatin maintenance, chromatin silencing at centromere, mitotic sister chromatid segregation and nucleoplasm localization

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Ortholog of S. cerevisiae : TDA6, A. fumigatus Af293 : Afu2g05980, A. niger CBS 513.88 : An02g14280, A. oryzae RIB40 : AO090001000716 and Aspergillus wentii : Aspwe1_0055229

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Ortholog(s) have small-subunit processome localization

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Protein expressed at increased levels during osmoadaptation

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Ortholog(s) have role in rRNA processing, ribosomal large subunit assembly and nucleolus localization

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Ortholog(s) have role in maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) and 90S preribosome, nucleolus, small-subunit processome localization

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Ortholog(s) have hercynylcysteine sulfoxide synthase, hercynylselenocysteine synthase, histidine N-methyltransferase activity

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Putative myo-inositol-1-phosphate synthase with a predicted role in phospholipid metabolism

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Ortholog of A. fumigatus Af293 : Afu2g01080, A. niger CBS 513.88 : An10g00470, A. oryzae RIB40 : AO090701000377, Aspergillus wentii : Aspwe1_0113772 and Aspergillus sydowii : Aspsy1_1029216

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Ortholog of A. fumigatus Af293 : Afu2g01610, A. niger CBS 513.88 : An03g04840, A. oryzae RIB40 : AO090701000787, Aspergillus wentii : Aspwe1_0112969 and Aspergillus sydowii : Aspsy1_0058707

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Ortholog(s) have intracellular localization

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Has domain(s) with predicted hydrolase activity

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Has domain(s) with predicted zinc ion binding activity

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Ortholog(s) have nucleus localization

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Putative phosphatidylinositol-4-phosphate 5-kinase with a predicted role in phosphatidic acid synthesis

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Has domain(s) with predicted transferase activity, transferring hexosyl groups activity and role in metabolic process

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Putative xylose transporter

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Ortholog of A. fumigatus Af293 : Afu6g10770, A. niger CBS 513.88 : An11g00650, A. oryzae RIB40 : AO090023000195, Aspergillus wentii : Aspwe1_0039441 and Aspergillus sydowii : Aspsy1_0045568

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Has domain(s) with predicted RNA binding activity

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class V chitin synthase

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Ortholog of A. nidulans FGSC A4 : AN9346, A. niger CBS 513.88 : An13g01700, An08g05310, A. oryzae RIB40 : AO090020000178 and Aspergillus sydowii : Aspsy1_0072048, Aspsy1_0132512, Aspsy1_1153861

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cAMP-dependent protein kinase catalytic subunit

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Ortholog(s) have role in DNA strand elongation involved in DNA replication, UV-damage excision repair and Elg1 RFC-like complex, cytosol, nucleus localization

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Ortholog(s) have cytoplasm localization

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Putative calcineurin binding protein, calcipressin

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Putative protein kinase

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Has domain(s) with predicted DNA binding, RNA polymerase II transcription factor activity, sequence-specific DNA binding, zinc ion binding activity and role in regulation of transcription, DNA-templated, transcription, DNA-templated

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Ortholog(s) have ATP-dependent peptidase activity, role in chaperone-mediated protein complex assembly, misfolded or incompletely synthesized protein catabolic process and mitochondrial matrix localization

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Predicted ADP ribosylation factor guanine nucleotide exchange factor (Arf GEF)

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Ortholog(s) have ATP-dependent 3'-5' DNA helicase activity, ATP-dependent four-way junction helicase activity, DNA replication origin binding, chromatin binding and single-stranded DNA binding, more

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DUF833 domain-containing protein

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Has domain(s) with predicted zinc ion binding activity

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Putative p67phox regulatory subunit homolog with a predicted role in regulating hyphal reactive oxygen species (ROS) production

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Putative glucose-6-phosphate isomerase with a predicted role in gluconeogenesis and glycolysis

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Has domain(s) with predicted DNA binding activity

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Putative long-chain-fatty-acid-CoA ligase

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Protein with an RNA recognition motif

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Karyopherin

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DNA replication licensing factor mcm7

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Ortholog of Aspergillus versicolor : Aspve1_0148858 and Aspergillus sydowii : Aspsy1_0029071

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Ortholog(s) have DNA replication origin binding, DNA-directed DNA polymerase activity, chromatin binding, single-stranded DNA binding activity

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Ortholog(s) have cytosol localization

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Catalase C

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Putative condensin

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Putative Rab GDP-dissociation inhibitor

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Putative GTP-binding protein

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Protein kinase domain-containing protein

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Ortholog of A. fumigatus Af293 : Afu2g07490, A. niger CBS 513.88 : An05g00040, Aspergillus wentii : Aspwe1_0175101, Aspergillus sydowii : Aspsy1_0044731 and Aspergillus terreus NIH2624 : ATET_06858

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Predicted fimbrin protein

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SumO conjugation (E2) enzyme

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putative bifunctional purine biosynthetic protein ade1

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Putative translation elongation factor EF-1 gamma

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Protein with WOPR domain involved in regulation of sexual development

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Ortholog of A. niger CBS 513.88 : An15g01155, Aspergillus wentii : Aspwe1_0024373, Aspergillus versicolor : Aspve1_0054818 and Aspergillus niger ATCC 1015 : 181821-mRNA

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Protein with homology to PCNA-like DNA damage sensor

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Has domain(s) with predicted aspartic-type endopeptidase activity and role in proteolysis

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Ortholog(s) have chromatin binding activity, role in cellular response to DNA damage stimulus and Rpd3L-Expanded complex, mitochondrion localization

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Putative ribose-phosphate pyrophosphokinase with a predicted role in histidine metabolism

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Vacuolar morphogenesis protein avaB

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Putative fructose-2,6-bisphosphate 2-phosphatase

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Has domain(s) with predicted nucleic acid binding, nucleotide binding activity

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Has domain(s) with predicted sequence-specific DNA binding, transcription factor activity, sequence-specific DNA binding, zinc ion binding activity and role in regulation of transcription, DNA-templated

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Ortholog(s) have DNA-directed DNA polymerase activity, role in DNA replication initiation, telomere capping and alpha DNA polymerase:primase complex, cytosol, nuclear envelope localization

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Ortholog of A. fumigatus Af293 : Afu5g13100, A. niger CBS 513.88 : An14g06050, A. oryzae RIB40 : AO090120000435, Aspergillus wentii : Aspwe1_0107169 and Aspergillus sydowii : Aspsy1_0040420

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Ortholog of A. fumigatus Af293 : Afu5g13150, A. niger CBS 513.88 : An14g05990, A. oryzae RIB40 : AO090120000440, Aspergillus wentii : Aspwe1_0050582 and Aspergillus sydowii : Aspsy1_0054814

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Has domain(s) with predicted DNA helicase activity and role in DNA repair, telomere maintenance

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putative O-acetyltransferase

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Ortholog of A. nidulans FGSC A4 : AN2784, AN1020, AN2199, A. fumigatus Af293 : Afu1g12970, A. niger CBS 513.88 : An15g05320 and A. oryzae RIB40 : AO090012000596, AO090038000022

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Has domain(s) with predicted substrate-specific transmembrane transporter activity, transmembrane transporter activity, role in transmembrane transport and integral component of membrane, membrane localization

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Ortholog of A. nidulans FGSC A4 : AN1597, AN2561, A. fumigatus Af293 : Afu3g03290, Afu3g13140, Afu3g15010, Afu3g03295 and A. niger CBS 513.88 : An17g00490, An11g08500, An09g01100, An08g09870, An07g06460

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Glutathione S-transferase

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Putative HECT ubiquitin ligase

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Predicted glycosylphosphatidylinositol (GPI)-anchored protein

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Has domain(s) with predicted nucleic acid binding, zinc ion binding activity

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Ortholog(s) have fungal-type vacuole, mitochondrion localization

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Putative phosphoglycerate kinase with a predicted role in gluconeogenesis and glycolysis

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Ortholog of A. fumigatus Af293 : Afu1g10620, A. niger CBS 513.88 : An08g02680, A. oryzae RIB40 : AO090038000358, Aspergillus wentii : Aspwe1_0049022 and Aspergillus sydowii : Aspsy1_0139464

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Putative LIM/homeobox transcription factor

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Ortholog of A. fumigatus Af293 : Afu5g07690, Aspergillus wentii : Aspwe1_0174894, Aspergillus versicolor : Aspve1_0135438 and Aspergillus sydowii : Aspsy1_0079229

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Protein with a predicted role in negative regulation of gluconeogenesis and protein targeting to vacuole

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Ortholog of A. fumigatus Af293 : Afu1g11450, A. niger CBS 513.88 : An08g03570, A. oryzae RIB40 : AO090038000280, Aspergillus wentii : Aspwe1_0068767 and Aspergillus sydowii : Aspsy1_0191007

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1,3-beta-glucanosyltransferase, putative

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SH3 domain protein that localizes to hyphal tips and septa

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Putative arrestin-related trafficking adapter

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Putative polyketide synthase

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Ortholog(s) have role in potassium ion transport, proton transport and integral component of mitochondrial inner membrane localization

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G-protein alpha subunit, putative

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Putative phosphorylase with a predicted role in glycogen degradation

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Putative 60S Ribosomal protein L5

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Ortholog of A. fumigatus Af293 : Afu1g12770, A. niger CBS 513.88 : An08g05540, A. oryzae RIB40 : AO090012000633, Aspergillus wentii : Aspwe1_0027882 and Aspergillus sydowii : Aspsy1_0191418

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Dual specificity protein kinase, putative

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Has domain(s) with predicted integral component of membrane localization

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Ortholog of A. fumigatus Af293 : Afu1g16680, A. niger CBS 513.88 : An01g10380, A. oryzae RIB40 : AO090005001032, Aspergillus wentii : Aspwe1_0109980 and Aspergillus sydowii : Aspsy1_0140609

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Putative peroxin with a predicted role in peroxisome biogenesis

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Subunit of the SAGA transcriptional regulatory complex

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Ortholog of A. oryzae RIB40 : AO090005001054

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Has domain(s) with predicted catalytic activity, orotidine-5'-phosphate decarboxylase activity and role in 'de novo' pyrimidine nucleobase biosynthetic process

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Putative phosphatidylinositol synthase with a predicted role in phospholipid metabolism

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Predicted NAD-dependent oxidoreductase

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Has domain(s) with predicted DNA binding, sequence-specific DNA binding, transcription factor activity, sequence-specific DNA binding activity and role in regulation of transcription, DNA-templated

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Ortholog(s) have chromatin binding activity, role in mitotic DNA replication preinitiation complex assembly and cytosol, nuclear chromatin localization

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Ortholog(s) have DNA translocase activity, double-stranded DNA binding activity

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Has domain(s) with predicted transporter activity, role in transport and membrane localization

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Ortholog of A. fumigatus Af293 : Afu1g14860, A. niger CBS 513.88 : An06g02310, An01g12970, A. oryzae RIB40 : AO090005001247, Aspergillus wentii : Aspwe1_0485796 and Aspergillus sydowii : Aspsy1_0083958

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Ortholog(s) have RNA polymerase II transcription factor activity, sequence-specific DNA binding activity

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Subunit of the SAGA transcriptional regulatory complex

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Transcript induced by light in in developmentally competent mycelia

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Transient receptor potential Ca2+ channel family protein

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Ortholog of A. nidulans FGSC A4 : AN0468, A. fumigatus Af293 : Afu1g01350, Afu1g04310, A. niger CBS 513.88 : An12g10460 and Aspergillus wentii : Aspwe1_0169394

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Ortholog of A. fumigatus Af293 : Afu1g04810, A. niger CBS 513.88 : An01g03730, Aspergillus wentii : Aspwe1_0169505 and Aspergillus sydowii : Aspsy1_0641478

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Ortholog(s) have mRNA binding, rRNA primary transcript binding activity

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Ortholog of A. fumigatus Af293 : Afu2g02490, Aspergillus flavus NRRL 3357 : AFL2T_08730, Aspergillus versicolor : Aspve1_0035846 and Aspergillus fumigatus A1163 : AFUB_019590

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Ortholog(s) have unfolded protein binding activity, role in protein folding and chaperonin-containing T-complex, nucleus localization

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Ortholog(s) have role in Arp2/3 complex-mediated actin nucleation and Arp2/3 protein complex, actin cortical patch, cell division site, cell tip, cytosol, nucleus localization

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Has domain(s) with predicted catalytic activity, metal ion binding, phosphoric diester hydrolase activity

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Putative dUTP pyrophosphatase with a predicted role in pyrimidine metabolism

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Predicted glycosylphosphatidylinositol (GPI)-anchored protein

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Putative transaldolase with a predicted role in the pentose-phosphate shunt

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Ortholog(s) have role in Golgi to plasma membrane transport and Golgi apparatus, fungal-type vacuole membrane localization

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Ortholog(s) have protein homodimerization activity, ubiquitin protein ligase activity, ubiquitin-protein transferase activity

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thioredoxin

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Putative transmembrane transporter

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Has domain(s) with predicted DNA binding, RNA polymerase II transcription factor activity, sequence-specific DNA binding, nucleic acid binding, zinc ion binding activity

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Ortholog of A. fumigatus Af293 : Afu5g12170, A. niger CBS 513.88 : An18g02150, A. oryzae RIB40 : AO090120000334, Aspergillus wentii : Aspwe1_0026669 and Aspergillus sydowii : Aspsy1_0040526

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Putative ribonucleotide reductase small subunit

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Ortholog(s) have role in invasive growth in response to glucose limitation, protein urmylation, pseudohyphal growth, tRNA wobble position uridine thiolation and cytosolic tRNA wobble base thiouridylase complex, nucleus localization

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Putative 1-phosphatidylinositol-3-kinase

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Ortholog of A. nidulans FGSC A4 : AN6413, AN6419, AN6946, AN5312, AN5664, AN8328, AN3241, AN10369, AN1930, AN2386, AN1738, AN11159, AN8951, AN1540, AN8971, AN9387, AN9266, AN9306, AN1317, AN10886, AN7232, AN7774, AN12202

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Ortholog(s) have valine-tRNA ligase activity

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Putative myosin I

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Has domain(s) with predicted FAD binding, oxidoreductase activity and role in metabolic process

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Ortholog of A. niger CBS 513.88 : An04g03830, Aspergillus wentii : Aspwe1_0047606, Aspergillus versicolor : Aspve1_0079774 and Aspergillus niger ATCC 1015 : 124618-mRNA

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Short-chain dehydrogenase

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Ortholog(s) have Golgi apparatus, cytosol, nucleus localization

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putative DNA mismatch repair protein

0 references

Has domain(s) with predicted nucleic acid binding, nucleotide binding activity

0 references

Ortholog(s) have unfolded protein binding activity

0 references

Putative sterol 14 alpha-demethylase with a predicted role in sterol metabolism

0 references

Ortholog(s) have TFIID-class transcription factor binding, core promoter binding, lysine-acetylated histone binding, nucleosomal histone binding activity

0 references

Ortholog of A. fumigatus Af293 : Afu4g10400, A. niger CBS 513.88 : An04g06400, A. oryzae RIB40 : AO090003001177, Aspergillus wentii : Aspwe1_0022851 and Aspergillus sydowii : Aspsy1_0053931

0 references

Ortholog(s) have role in conidiophore development, conidium formation, hyphal growth

0 references

Homeobox-like domain-containing protein

0 references

Putative ubiquitin-specific protease

0 references

Ortholog of A. niger CBS 513.88 : An11g05450, A. oryzae RIB40 : AO090023000304, Aspergillus wentii : Aspwe1_0054870 and Aspergillus terreus NIH2624 : ATET_05948

0 references

Putative homolog of mammalian EndoG and S. cerevisiae Nuc1p

0 references

Ortholog(s) have mRNA binding activity and role in ascospore formation, conjugation with cellular fusion, ribosomal large subunit assembly, ribosomal subunit export from nucleus

0 references

Ortholog(s) have cell division site, cytosol, nucleus localization

0 references

Ortholog(s) have ubiquitin binding activity, role in negative regulation of protein catabolic process, nucleotide-excision repair, protein ubiquitination and cytosol, nuclear envelope localization

0 references

Ortholog of A. nidulans FGSC A4 : AN10160, AN0323, A. fumigatus Af293 : Afu1g02440, Afu4g02760, A. niger CBS 513.88 : An01g05750, An12g09350, An13g03290 and A. oryzae RIB40 : AO090020000719, AO090005000852

0 references

Ortholog(s) have role in Golgi to plasma membrane protein transport and Golgi apparatus, cytosol localization

0 references

Ortholog(s) have DNA replication origin binding, chromatin binding, single-stranded DNA binding, single-stranded DNA-dependent ATP-dependent DNA helicase activity

0 references

Has domain(s) with predicted deaminase activity and role in purine ribonucleoside monophosphate biosynthetic process

0 references

Putative RNA polymerase III, large subunit

0 references

Ortholog of A. fumigatus Af293 : Afu3g14410, A. niger CBS 513.88 : An09g04050, A. oryzae RIB40 : AO090701000592, Aspergillus wentii : Aspwe1_0073746 and Aspergillus sydowii : Aspsy1_0146188

0 references

Ortholog(s) have endoplasmic reticulum, mitochondrion localization

0 references

Has domain(s) with predicted iron ion binding, oxidoreductase activity and role in fatty acid biosynthetic process, oxidation-reduction process

0 references

Ortholog(s) have role in Group I intron splicing and mitochondrion localization

0 references

UTP-glucose-1-phosphate uridylyltransferase, putative

0 references

Has domain(s) with predicted heme binding activity

0 references

LisH domain-containing protein

0 references

Ortholog(s) have double-stranded DNA-dependent ATPase activity, role in double-strand break repair via homologous recombination and Smc5-Smc6 complex, nucleus localization

0 references

Ortholog(s) have phosphatidylinositol-3-phosphate binding, phospholipase D activity

0 references

anucleate primary sterigmata protein B

0 references

Has domain(s) with predicted GTP binding, GTPase activity and role in intracellular protein transport, nucleocytoplasmic transport, protein transport, signal transduction, small GTPase mediated signal transduction

0 references

Putative ADP-ribosylglycohydrolase family protein

0 references

Putative G-protein coupled receptor

0 references

Has domain(s) with predicted ATP binding, ATPase activity, ATPase activity, coupled to transmembrane movement of substances, nucleoside-triphosphatase activity, nucleotide binding activity and role in transport

0 references

Has domain(s) with predicted nuclease activity and role in DNA repair

0 references

Ortholog of S. cerevisiae RPS0A and RPS0B

0 references

GH16 domain-containing protein

0 references

Has domain(s) with predicted DNA binding, catalytic activity, nuclease activity and role in DNA repair

0 references

Ortholog of A. fumigatus Af293 : Afu3g08900, A. niger CBS 513.88 : An16g02430, A. oryzae RIB40 : AO090005001346, Aspergillus wentii : Aspwe1_0041802 and Aspergillus sydowii : Aspsy1_0042503

0 references

Ortholog(s) have exopeptidase activity

0 references

Has domain(s) with predicted transferase activity, transferring glycosyl groups activity and membrane localization

0 references

Ortholog of A. niger CBS 513.88 : An11g00040, A. oryzae RIB40 : AO090011000565, Aspergillus niger ATCC 1015 : 46090-mRNA, 52849-mRNA and Aspergillus carbonarius ITEM 5010 : Acar5010_204950

0 references

Ortholog(s) have sequence-specific DNA binding activity and role in cellular response to drug, cellular response to osmotic stress, cytoplasmic translational initiation

0 references

Ortholog(s) have intracellular localization

0 references

glucose-6-phosphate 1-dehydrogenase

0 references

Ortholog of A. fumigatus Af293 : Afu3g08450, A. niger CBS 513.88 : An02g12090, A. oryzae RIB40 : AO090005001429, Aspergillus wentii : Aspwe1_0551961 and Aspergillus sydowii : Aspsy1_0056256

0 references

Ortholog of A. fumigatus Af293 : Afu3g07890, A. niger CBS 513.88 : An02g11360, A. oryzae RIB40 : AO090005001486, Aspergillus wentii : Aspwe1_0041944 and Aspergillus sydowii : Aspsy1_0056308

0 references

Ortholog of A. nidulans FGSC A4 : AN8368, A. fumigatus Af293 : Afu3g07900, Afu4g14080, Afu8g00900, A. niger CBS 513.88 : An02g11330, An03g05560 and A. oryzae RIB40 : AO090120000471

0 references

Putative chaperonin complex component, TCP-1 delta subunit

0 references

Basic-region leucine zipper transcription factor

0 references

Ortholog(s) have oxysterol binding, phosphatidic acid binding, phosphatidylinositol-4,5-bisphosphate binding, phosphatidylinositol-4-phosphate binding, sterol transporter activity

0 references

fructose-bisphosphate aldolase, putative

0 references

Ortholog of A. fumigatus Af293 : Afu3g11810, A. niger CBS 513.88 : An02g07640, A. oryzae RIB40 : AO090003000743, Aspergillus wentii : Aspwe1_0104946 and Aspergillus sydowii : Aspsy1_0778921

0 references

Putative mannitol 2-dehydrogenase with a predicted role in mannose/mannitol, fructose, and sorbose/sorbitol metabolism

0 references

Has domain(s) with predicted oxidoreductase activity and role in oxidation-reduction process

0 references

Putative phosphatidylinositol-4-phosphate 5-kinase with a predicted role in phospholipid metabolism

0 references

Putative DNA repair protein

0 references

Ortholog of A. fumigatus Af293 : Afu3g05990, Neosartorya fischeri NRRL 181 : NFIA_071260, Aspergillus wentii : Aspwe1_0042197 and Aspergillus clavatus NRRL 1 : ACLA_033940

0 references

Putative ortholog of PAT1, a topoisomerase II-associated protein

0 references

Ortholog(s) have role in regulation of translation in response to nitrogen starvation

0 references

Has domain(s) with predicted catalytic activity

0 references

Phosphoprotein regulated by proline-directed phosphorylation

0 references

Transcript induced by light in in developmentally competent mycelia

0 references

0 references

Putative transmembrane transporter

0 references

Has domain(s) with predicted catalytic activity and role in nucleoside metabolic process

0 references

Ortholog(s) have phospholipid-translocating ATPase activity and role in actin cortical patch localization, endocytosis, intracellular protein transport, phospholipid translocation

0 references

Ortholog(s) have role in macroautophagy and Golgi apparatus, endoplasmic reticulum, pre-autophagosomal structure localization

0 references

Ortholog(s) have cytosol, nucleolus localization

0 references

Ortholog of A. fumigatus Af293 : Afu1g07590, A. niger CBS 513.88 : An07g10220, A. oryzae RIB40 : AO090012001011, Aspergillus wentii : Aspwe1_0120584 and Aspergillus sydowii : Aspsy1_0156520

0 references

Has domain(s) with predicted oxidoreductase activity

0 references

Has domain(s) with predicted protein disulfide oxidoreductase activity

0 references

Ortholog(s) have 1-phosphatidylinositol-3-phosphate 5-kinase activity, phosphatidylinositol-3-phosphate binding activity

0 references

Ortholog(s) have Golgi apparatus, cell cortex of cell tip, cell division site localization

0 references

Ortholog(s) have RNA binding, histone methyltransferase activity (H3-K4 specific) activity

0 references

0 references

Has domain(s) with predicted catalytic activity and role in metabolic process

0 references

Putative G-protein coupled receptor

0 references

Putative fumarate hydratase

0 references

Putative pre-initiation complex, subunit

0 references

Putative enzyme with a predicted role in fatty acid degradation

0 references

Xanthine dehydrogenase

0 references

Ortholog of A. fumigatus Af293 : Afu4g11270, A. niger CBS 513.88 : An04g05360, A. oryzae RIB40 : AO090003001094, Aspergillus wentii : Aspwe1_0102365 and Aspergillus sydowii : Aspsy1_0148568

0 references

Fructose-1,6-bisphosphatase

0 references

Putative mannose-1-phosphate guanylyltransferase with a predicted role in mannose/mannitol, fructose, and sorbose/sorbitol metabolism

0 references

Ortholog(s) have role in ascospore-type prospore membrane assembly, late endosome to vacuole transport, protein retention in Golgi apparatus, protein targeting to vacuole

0 references

Putative F-box protein

0 references

Putative alpha,alpha-trehalose-phosphate synthase (UDP-forming) with a role in trehalose biosynthesis

0 references

Has domain(s) with predicted catalytic activity, sulfuric ester hydrolase activity and role in metabolic process

0 references

0 references

Putative carboxypeptidase Y

0 references

Putative cytochrome P450

0 references

Ortholog of A. nidulans FGSC A4 : AN2708, AN1572, AN7419, A. fumigatus Af293 : Afu6g14000, Afu8g05970, A. niger CBS 513.88 : An07g02380, An08g07270 and A. oryzae RIB40 : AO090026000716, AO090005000543

0 references

Aspergillus nidulans

object named as

Aspergillus nidulans

1 reference

based on heuristic

inferred from title

author

Maria Helena de Souza Goldman

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17880424%20AND%20SRC:MED&resulttype=core&format=json

Márcia Eliana da Silva Ferreira

7 January 2020

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17880424%20AND%20SRC:MED&resulttype=core&format=json

7 January 2020

Gustavo H. Goldman

8

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17880424%20AND%20SRC:MED&resulttype=core&format=json

7 January 2020

author name string

Iran Malavazi

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17880424%20AND%20SRC:MED&resulttype=core&format=json

7 January 2020

Marcela Savoldi

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17880424%20AND%20SRC:MED&resulttype=core&format=json

7 January 2020

Frederico Marianetti Soriani

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17880424%20AND%20SRC:MED&resulttype=core&format=json

7 January 2020

Pierina Sueli Bonato

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17880424%20AND%20SRC:MED&resulttype=core&format=json

7 January 2020

Maria Helena de Souza Goldman

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17880424%20AND%20SRC:MED&resulttype=core&format=json

7 January 2020

language of work or name

English

0 references

publication date

1 October 2007

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17880424%20AND%20SRC:MED&resulttype=core&format=json

7 January 2020

published in

Molecular Microbiology

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17880424%20AND%20SRC:MED&resulttype=core&format=json

7 January 2020

volume

66

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17880424%20AND%20SRC:MED&resulttype=core&format=json

7 January 2020

issue

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17880424%20AND%20SRC:MED&resulttype=core&format=json

7 January 2020

page(s)

74-99

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17880424%20AND%20SRC:MED&resulttype=core&format=json

Sterol-rich plasma membrane domains in fungi.

7 January 2020

cites work

1 reference

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ATM deficiency and oxidative stress: a new dimension of defective response to DNA damage

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The primary biochemical effect of a morphological mutation in Neurospora crassa

21 January 2018

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Squalene synthase inhibitors : clinical pharmacology and cholesterol-lowering potential

21 January 2018

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Cell cycle progression and cell polarity require sphingolipid biosynthesis in Aspergillus nidulans

21 January 2018

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Stable siRNA-mediated silencing of ATM alters the transcriptional profile of HeLa cells

21 January 2018

1 reference

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Ataxia-telangiectasia, an evolving phenotype

21 January 2018

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C1 domains exposed: from diacylglycerol binding to protein-protein interactions

21 January 2018

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Checkpoint defects leading to premature mitosis also cause endoreplication of DNA in Aspergillus nidulans

21 January 2018

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21 January 2018

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Dissection of a DNA-damage-induced transcriptional network using a combination of microarrays, RNA interference and computational promoter analysis

21 January 2018

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Checkpoint proteins control morphogenetic events during DNA replication stress in Saccharomyces cerevisiae

21 January 2018

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The Aspergillus nidulans npkA gene encodes a Cdc2-related kinase that genetically interacts with the UvsBATR kinase

21 January 2018

1 reference

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Aspergillus nidulans uvsBATR and scaANBS1 genes show genetic interactions during recovery from replication stress and DNA damage

21 January 2018

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Aspergillus nidulans as a model system to characterize the DNA damage response in eukaryotes

21 January 2018

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The DNA damage response in filamentous fungi

21 January 2018

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SepBCTF4 is required for the formation of DNA-damage-induced UvsCRAD51 foci in Aspergillus nidulans

21 January 2018

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Polarisome meets spitzenkörper: microscopy, genetics, and genomics converge

21 January 2018

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Toward a molecular understanding of pleiotropy

21 January 2018

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Protein kinase C (PkcA) of Aspergillus nidulans is involved in penicillin production

21 January 2018

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The role of microtubules in rapid hyphal tip growth of Aspergillus nidulans

21 January 2018

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ATM and ATR: components of an integrated circuit

21 January 2018

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Analysis of ataxia-telangiectasia mutated (ATM)- and Nijmegen breakage syndrome (NBS)-regulated gene expression patterns

21 January 2018

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The many substrates and functions of ATM

21 January 2018

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Disturbance of sphingolipid biosynthesis abrogates the signaling of Mss4, phosphatidylinositol-4-phosphate 5-kinase, in yeast

21 January 2018

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The role of the kinesin motor KipA in microtubule organization and polarized growth of Aspergillus nidulans

21 January 2018

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Choreography of the DNA damage response: spatiotemporal relationships among checkpoint and repair proteins

21 January 2018

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myoA of Aspergillus nidulans encodes an essential myosin I required for secretion and polarized growth

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ATM and ataxia telangiectasia

21 January 2018

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The Aspergillus nidulans sldI(RAD50) gene interacts with bimE(APC1), a homologue of an anaphase-promoting complex subunit

21 January 2018

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Regulation of hyphal morphogenesis and the DNA damage response by the Aspergillus nidulans ATM homolog AtmA.

21 January 2018

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Lipid raft polarization contributes to hyphal growth in Candida albicans

21 January 2018

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ATM and ATR substrate analysis reveals extensive protein networks responsive to DNA damage

21 January 2018

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Serine palmitoyltransferase is the primary target of a sphingosine-like immunosuppressant, ISP-1/myriocin

21 January 2018

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Utilization of oriented peptide libraries to identify substrate motifs selected by ATM.

21 January 2018

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Radioresistant DNA synthesis: an intrinsic feature of ataxia telangiectasia

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MesA, a novel fungal protein required for the stabilization of polarity axes in Aspergillus nidulans

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From common signalling components to cell specific responses: insights from the cereal aleurone.

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Myosin-V, Kinesin-1, and Kinesin-3 cooperate in hyphal growth of the fungus Ustilago maydis

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The genetic basis of cellular morphogenesis in the filamentous fungus Neurospora crassa

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Quantitative analysis of the relative transcript levels of ABC transporter Atr genes in Aspergillus nidulans by real-time reverse transcription-PCR assay

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Functional characterization and localization of the Aspergillus nidulans formin SEPA

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Lipid signaling in pathogenic fungi

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ATR and ATM regulate the timing of DNA replication origin firing

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Critical role of DNA checkpoints in mediating genotoxic-stress-induced filamentous growth in Candida albicans

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ATM and ATR: networking cellular responses to DNA damage

21 January 2018

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The ATM-mediated DNA-damage response: taking shape.

21 January 2018

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The cellular roles of molecular motors in fungi

21 January 2018

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Hyphal growth: a tale of motors, lipids, and the Spitzenkörper.

21 January 2018

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Accumulation of DNA damage and reduced levels of nicotine adenine dinucleotide in the brains of Atm-deficient mice

21 January 2018

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Functional characterization of Aspergillus nidulans homologues of Saccharomyces cerevisiae Spa2 and Bud6.

21 January 2018

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Signaling functions of phosphatidic acid.

21 January 2018

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Abnormal myo-inositol and phospholipid metabolism in cultured fibroblasts from patients with ataxia telangiectasia.

21 January 2018

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