Circular dichroism and guanine quadruplexes (Q37997234)

26 August 2017

Circular dichroism and guanine quadruplexes (English)

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26 August 2017

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Michaela Vorlíčková

1

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26 August 2017

Iva Kejnovská

2

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26 August 2017

Janos Sagi

3

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26 August 2017

Daniel Renčiuk

4

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26 August 2017

Klára Bednářová

5

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26 August 2017

Jitka Motlová

6

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26 August 2017

Jaroslav Kypr

7

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26 August 2017

17 March 2012

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26 August 2017

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26 August 2017

57

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26 August 2017

1

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26 August 2017

64-75

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Evidence for intramolecularly folded i-DNA structures in biologically relevant CCC-repeat sequences

26 August 2017

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https://api.crossref.org/works/10.1016%2FJ.YMETH.2012.03.011

A nuclease hypersensitive element in the human c-myc promoter adopts several distinct i-tetraplex structures

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YMETH.2012.03.011

Four-stranded nucleic acid structures 25 years later: from guanosine gels to telomer DNA.

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YMETH.2012.03.011

Following G-quartet formation by UV-spectroscopy

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YMETH.2012.03.011

Effects of an 8-bromodeoxyguanosine incorporation on the parallel quadruplex structure [d(TGGGT)]4.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2012.03.011

The insertion of two 8-methyl-2'-deoxyguanosine residues in tetramolecular quadruplex structures: trying to orientate the strands

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YMETH.2012.03.011

G-quadruplex DNA structures--variations on a theme

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YMETH.2012.03.011

Hairpin and parallel quartet structures for telomeric sequences.

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YMETH.2012.03.011

Thermodynamics of G-tetraplex formation by telomeric DNAs

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YMETH.2012.03.011

Circular dichroism and conformational polymorphism of DNA.

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YMETH.2012.03.011

Measured and calculated CD spectra of G-quartets stacked with the same or opposite polarities.

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YMETH.2012.03.011

A non-empirical chromophoric interpretation of CD spectra of DNA G-quadruplex structures

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YMETH.2012.03.011

Topological Characterization of Nucleic Acid G-Quadruplexes by UV Absorption and Circular Dichroism

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2012.03.011

Quadruplex structure of Oxytricha telomeric DNA oligonucleotides

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YMETH.2012.03.011

Crystal structure of the potassium form of an Oxytricha nova G-quadruplex

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2012.03.011

Solution structure of the Oxytricha telomeric repeat d[G4(T4G4)3] G-tetraplex

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2012.03.011

Thrombin-binding DNA aptamer forms a unimolecular quadruplex structure in solution

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YMETH.2012.03.011

The tertiary structure of a DNA aptamer which binds to and inhibits thrombin determines activity

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YMETH.2012.03.011

Reconciliation of the X-ray and NMR structures of the thrombin-binding aptamer d(GGTTGGTGTGGTTGG).

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2012.03.011

Biophysical and biological properties of quadruplex oligodeoxyribonucleotides

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YMETH.2012.03.011

Vertebrate telomere repeat DNAs favor external loop propeller quadruplex structures in the presence of high concentrations of potassium

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YMETH.2012.03.011

The thrombin binding aptamer GGTTGGTGTGGTTGG forms a bimolecular guanine tetraplex

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YMETH.2012.03.011

Circular dichroism of quadruplex DNAs: applications to structure, cation effects and ligand binding

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2012.03.011

Guanine quadruplex formation by RNA/DNA hybrid analogs of Oxytricha telomere G(4)T(4)G(4) fragment

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2012.03.011

Human telomeric sequence forms a hybrid-type intramolecular G-quadruplex structure with mixed parallel/antiparallel strands in potassium solution

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YMETH.2012.03.011

The B to A transition of DNA in solution

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YMETH.2012.03.011

Arrangements of human telomere DNA quadruplex in physiologically relevant K+ solutions

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YMETH.2012.03.011

Solution structure of the human telomeric repeat d[AG3(T2AG3)3] G-tetraplex

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2012.03.011

Energetics and kinetics of a conformational switch in G-quadruplex DNA

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YMETH.2012.03.011

Intramolecular quadruplex conformation of human telomeric DNA assessed with 125I-radioprobing

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2012.03.011

The new models of the human telomere DNA in K+ solution revealed by NMR analysis assisted by the incorporation of 8-bromoguanines

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2012.03.011

The new models of the human telomere d[AGGG(TTAGGG)3] in K+ solution

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YMETH.2012.03.011

Investigation of spectral conversion of d(TTAGGG)4 and d(TTAGGG)13 upon potassium titration by a G-quadruplex recognizer BMVC molecule

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2012.03.011

Conserved guanine-guanine stacking in tetraplex and duplex DNA.

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YMETH.2012.03.011

Single-stranded nucleic acid helical secondary structure stabilized by ionic bonds: d(A(+)-G)10

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YMETH.2012.03.011

Dimethylsulfoxide-stabilized conformer of guanine-adenine repeat strand of DNA.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2012.03.011

Alternating d(G-A) sequences form a parallel-stranded DNA homoduplex

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YMETH.2012.03.011

Dimerization of the guanine-adenine repeat strands of DNA.

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YMETH.2012.03.011

Conformational Polymorphism of d(A-G)n and Related Oligonucleotide Sequences

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YMETH.2012.03.011

DNA tetraplex formation in the control region of c-myc

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2012.03.011

Direct evidence for a G-quadruplex in a promoter region and its targeting with a small molecule to repress c-MYC transcription

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2012.03.011

Solution structure of the biologically relevant G-quadruplex element in the human c-MYC promoter. Implications for G-quadruplex stabilization

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2012.03.011

Crystal structure of parallel quadruplexes from human telomeric DNA

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2012.03.011

Propeller-type parallel-stranded G-quadruplexes in the human c-myc promoter

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2012.03.011

Role of loops in the guanine quadruplex formation by DNA/RNA hybrid analogs of G4T4G4.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2012.03.011

Engineering the quadruplex fold: nucleoside conformation determines both folding topology and molecularity in guanine quadruplexes

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2012.03.011

Human telomere quadruplex: refolding and selection of individual conformers via RNA/DNA chimeric editing

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2012.03.011

Guanine tetraplex topology of human telomere DNA is governed by the number of (TTAGGG) repeats

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2012.03.011

d(G3T4G4) forms unusual dimeric G-quadruplex structure with the same general fold in the presence of K+, Na+ or NH4+ ions

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2012.03.011

Solution structure of the Tetrahymena telomeric repeat d(T2G4)4 G-tetraplex

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2012.03.011

Structure of the human telomere in K+ solution: an intramolecular (3 + 1) G-quadruplex scaffold

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2012.03.011

Different loop arrangements of intramolecular human telomeric (3+1) G-quadruplexes in K+ solution

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2012.03.011

Formation of (3+1) G-quadruplexes with a long loop by human telomeric DNA spanning five or more repeats.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2012.03.011

Structure and stability of higher-order human telomeric quadruplexes

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2012.03.011

Calculating thermodynamic data for transitions of any molecularity from equilibrium melting curves

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2012.03.011

Characterization of structure and stability of long telomeric DNA G-quadruplexes.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2012.03.011

Consecutive formation of G-quadruplexes in human telomeric-overhang DNA: a protective capping structure for telomere ends

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2012.03.011

Structure of the Human Telomere in K + Solution: A Stable Basket-Type G-Quadruplex with Only Two G-Tetrad Layers

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2012.03.011

Ethanol is a better inducer of DNA guanine tetraplexes than potassium cations

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2012.03.011

Intramolecular and intermolecular guanine quadruplexes of DNA in aqueous salt and ethanol solutions

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2012.03.011

Hydration regulates thermodynamics of G-quadruplex formation under molecular crowding conditions.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2012.03.011

Human telomeric DNA forms parallel-stranded intramolecular G-quadruplex in K+ solution under molecular crowding condition

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2012.03.011

Molecular crowding effects on structure and stability of DNA.

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YMETH.2012.03.011

Hydration is a major determinant of the G-quadruplex stability and conformation of the human telomere 3' sequence of d(AG3(TTAG3)3)

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2012.03.011

Guanine tetraplex formation by short DNA fragments containing runs of guanine and cytosine

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2012.03.011

Aqueous trifluorethanol solutions simulate the environment of DNA in the crystalline state

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2012.03.011

Not so crystal clear: the structure of the human telomere G-quadruplex in solution differs from that present in a crystal

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2012.03.011

Platinum cross-linking of adenines and guanines on the quadruplex structures of the AG3(T2AG3)3 and (T2AG3)4 human telomere sequences in Na+ and K+ solutions

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2012.03.011

Stacking of G-quadruplexes: NMR structure of a G-rich oligonucleotide with potential anti-HIV and anticancer activity

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2012.03.011

The parallel G-quadruplex structure of vertebrate telomeric repeat sequences is not the preferred folding topology under physiological conditions.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2012.03.011

Molecular dynamics and principal components analysis of human telomeric quadruplex multimers

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2012.03.011

Polymorphism of human telomeric quadruplex structures

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2012.03.011

7 January 2021

The tail of the telomere

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2012.03.011

The orientation of the ends of G-quadruplex structures investigated using end-extended oligonucleotides

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2012.03.011

Single molecule studies of physiologically relevant telomeric tails reveal POT1 mechanism for promoting G-quadruplex unfolding

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2012.03.011

G-quadruplex motifs arranged in tandem occurring in telomeric repeats and the insulin-linked polymorphic region

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2012.03.011

Absorption and circular dichroism spectroscopy of nucleic acid duplexes and triplexes

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2012.03.011

10.1016/J.YMETH.2012.03.011

7 January 2021

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DOI

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26 August 2017

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