Metabolic ensemble modeling for strain engineers (Q37948711)

25 August 2017

Metabolic ensemble modeling for strain engineers (English)

1 reference

25 August 2017

Yikun Tan

1

1 reference

PubMed ID

22021171

25 August 2017

James C Liao

series ordinal

2

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25 August 2017

21 October 2011

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25 August 2017

Biotechnology Journal

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25 August 2017

7

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25 August 2017

3

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25 August 2017

343-353

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A mathematical model for the influence of fructose 6-phosphate, ATP, potassium, ammonium and magnesium on the phosphofructokinase from rat erythrocytes;.

25 August 2017

1 reference

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The regulatory principles of glycolysis in erythrocytes in vivo and in vitro. A minimal comprehensive model describing steady states, quasi-steady states and time-dependent processes

21 January 2018

1 reference

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A mathematical model for the growth of a single cell of E. coli on a glucose/glutamine/ammonium medium.

21 January 2018

1 reference

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Towards the development of a minimal cell model by generalization of a model of Escherichia coli: use of dimensionless rate parameters

21 January 2018

1 reference

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A modular minimal cell model: purine and pyrimidine transport and metabolism

21 January 2018

1 reference

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In vivo analysis of metabolic dynamics in Saccharomyces cerevisiae: II. Mathematical model.

21 January 2018

1 reference

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Dynamic modeling of the central carbon metabolism of Escherichia coli.

21 January 2018

1 reference

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Atmospheric science. Weather forecasting with ensemble methods.

21 January 2018

1 reference

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Quantification of modelling uncertainties in a large ensemble of climate change simulations

21 January 2018

1 reference

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Ensemble modeling for analysis of cell signaling dynamics.

21 January 2018

1 reference

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Ensembles of uncertain mathematical models can identify network response to therapeutic interventions

21 January 2018

1 reference

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Causal protein-signaling networks derived from multiparameter single-cell data

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201100186

Automated ensemble modeling with modelMaGe: analyzing feedback mechanisms in the Sho1 branch of the HOG pathway

21 January 2018

1 reference

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Metabolic engineering under uncertainty. I: framework development.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201100186

Ensemble modeling for strain development of L-lysine-producing Escherichia coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201100186

Ensemble modeling of hepatic fatty acid metabolism with a synthetic glyoxylate shunt

21 January 2018

1 reference

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Redox homeostasis phenotypes in RubisCO-deficient Rhodobacter sphaeroides via ensemble modeling

21 January 2018

1 reference

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Reducing the allowable kinetic space by constructing ensemble of dynamic models with the same steady-state flux.

21 January 2018

1 reference

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Ensemble modeling of metabolic networks

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201100186

Structural kinetic modeling of metabolic networks

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201100186

Absolute metabolite concentrations and implied enzyme active site occupancy in Escherichia coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201100186

Flow injection analysis for simultaneous quantification of prolactin concentration and glycosylation macroheterogeneity in cell culture samples

21 January 2018

1 reference

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Simultaneous determination of multiple intracellular metabolites in glycolysis, pentose phosphate pathway and tricarboxylic acid cycle by liquid chromatography-mass spectrometry.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201100186

MIRACLE: mass isotopomer ratio analysis of U-13C-labeled extracts. A new method for accurate quantification of changes in concentrations of intracellular metabolites

21 January 2018

1 reference

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Ensemble modeling for aromatic production in Escherichia coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201100186

13C-labeled gluconate tracing as a direct and accurate method for determining the pentose phosphate pathway split ratio in Penicillium chrysogenum

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201100186

Modeling and simulation of genetic regulatory systems: a literature review

21 January 2018

1 reference

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Dynamic simulation and metabolic re-design of a branched pathway using linlog kinetics.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201100186

A method for estimation of elasticities in metabolic networks using steady state and dynamic metabolomics data and linlog kinetics

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201100186

Inverse flux analysis for reduction of acetate excretion in Escherichia coli.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201100186

Can yeast glycolysis be understood in terms of in vitro kinetics of the constituent enzymes? Testing biochemistry

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIOT.201100186

21 January 2018

Identifiers

DOI

10.1002/BIOT.201100186

1 reference

25 August 2017

1 reference

PubMed ID

22021171