Topoisomerases and site-specific recombinases: similarities in structure and mechanism. (Q37810595)

23 August 2017

Topoisomerases and site-specific recombinases: similarities in structure and mechanism (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=PMCID:PMC6290911&resulttype=core&format=json

13 May 2020

author name string

Wei Yang

series ordinal

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=PMCID:PMC6290911&resulttype=core&format=json

13 May 2020

publication date

1 December 2010

1 reference

Critical Reviews in Biochemistry and Molecular Biology

23 August 2017

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=PMCID:PMC6290911&resulttype=core&format=json

13 May 2020

volume

45

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=PMCID:PMC6290911&resulttype=core&format=json

13 May 2020

issue

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=PMCID:PMC6290911&resulttype=core&format=json

13 May 2020

page(s)

520-534

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=PMCID:PMC6290911&resulttype=core&format=json

The 5S rRNA maturase, ribonuclease M5, is a Toprim domain family member

13 May 2020

cites work

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2010.513375

Toprim--a conserved catalytic domain in type IA and II topoisomerases, DnaG-type primases, OLD family nucleases and RecR proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2010.513375

Mutants of Tn3 resolvase which do not require accessory binding sites for recombination activity

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2010.513375

Prokaryotic 5'-3' exonucleases share a common core structure with gamma-delta resolvase.

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2010.513375

Fibrates in the chemical action of daunorubicin.

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2010.513375

DNA topology: topoisomerases keep it simple

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2010.513375

The role of ATP in the reactions of type II DNA topoisomerases

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2010.513375

Structure and mechanism of DNA topoisomerase II

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2010.513375

A structural basis for allosteric control of DNA recombination by lambda integrase.

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2010.513375

Activating mutations of Tn3 resolvase marking interfaces important in recombination catalysis and its regulation

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2010.513375

The current ICE age: biology and evolution of SXT-related integrating conjugative elements.

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2010.513375

Phage integration and chromosome structure. A personal history

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2010.513375

Site-specific recombination and topoisomerization by Tn21 resolvase: role of metal ions

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2010.513375

Strand breakage by the DNA untwisting enzyme results in covalent attachment of the enzyme to DNA

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2010.513375

DNA topoisomerases: structure, function, and mechanism

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2010.513375

Crystal structure of a complex of a type IA DNA topoisomerase with a single-stranded DNA molecule

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2010.513375

New insight into site-specific recombination from Flp recombinase-DNA structures

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2010.513375

The role of the conserved Trp330 in Flp-mediated recombination. Functional and structural analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2010.513375

Conservation of structure and mechanism between eukaryotic topoisomerase I and site-specific recombinases

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2010.513375

Reverse gyrase: a helicase-like domain and a type I topoisomerase in the same polypeptide.

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2010.513375

Linking numbers and nucleosomes

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2010.513375

Architecture of the hin synaptic complex during recombination: the recombinase subunits translocate with the DNA strands

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2010.513375

Mechanical constraints on Hin subunit rotation imposed by the Fis/enhancer system and DNA supercoiling during site-specific recombination

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2010.513375

Mechanistic studies on E. coli DNA topoisomerase I: divalent ion effects

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2010.513375

Structural basis for gate-DNA recognition and bending by type IIA topoisomerases

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2010.513375

Origin and evolution of DNA topoisomerases

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2010.513375

Chemical shift mapping of gammadelta resolvase dimer and activated tetramer: mechanistic implications for DNA strand exchange.

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2010.513375

The orientation of mycobacteriophage Bxb1 integration is solely dependent on the central dinucleotide of attP and attB.

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2010.513375

Requirements for catalysis in the Cre recombinase active site

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2010.513375

Mechanisms of site-specific recombination.

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2010.513375

Structure of Cre recombinase complexed with DNA in a site-specific recombination synapse

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2010.513375

Molecular organization in site-specific recombination: the catalytic domain of bacteriophage HP1 integrase at 2.7 A resolution

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2010.513375

Integrating prokaryotes and eukaryotes: DNA transposases in light of structure.

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2010.513375

Site-specific recombination and partitioning systems in the stable high copy propagation of the 2-micron yeast plasmid

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2010.513375

Host protein requirements for in vitro site-specific DNA inversion.

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2010.513375

Implications of structures of synaptic tetramers of gamma delta resolvase for the mechanism of recombination

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2010.513375

Gin-mediated DNA inversion: product structure and the mechanism of strand exchange

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2010.513375

Modular architecture of the bacteriophage T7 primase couples RNA primer synthesis to DNA synthesis

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2010.513375

Structure of the RNA polymerase domain of E. coli primase

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2010.513375

Friction and torque govern the relaxation of DNA supercoils by eukaryotic topoisomerase IB.

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2010.513375

Catalytic mechanism of DNA topoisomerase IB.

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2010.513375

Flexibility in DNA recombination: structure of the lambda integrase catalytic core

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2010.513375

Structural basis of gate-DNA breakage and resealing by type II topoisomerases

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2010.513375

The architecture of the gammadelta resolvase crossover site synaptic complex revealed by using constrained DNA substrates.

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2010.513375

Structure of a synaptic gammadelta resolvase tetramer covalently linked to two cleaved DNAs

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2010.513375

Three-dimensional structure of the 67K N-terminal fragment of E. coli DNA topoisomerase I

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2010.513375

The ATP-binding site of type II topoisomerases as a target for antibacterial drugs

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2010.513375

Site-specific recombination by Tn3 resolvase, photocrosslinked to its supercoiled DNA substrate

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2010.513375

Tn3 resolvase catalyses multiple recombination events without intermediate rejoining of DNA ends.

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2010.513375

Communication between Hin recombinase and Fis regulatory subunits during coordinate activation of Hin-catalyzed site-specific DNA inversion

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2010.513375

Topological analysis of Hin-catalysed DNA recombination in vivo and in vitro.

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2010.513375

Variola virus topoisomerase: DNA cleavage specificity and distribution of sites in Poxvirus genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2010.513375

The structure of Escherichia coli DNA topoisomerase III

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2010.513375

Architecture of a Serine Recombinase-DNA Regulatory Complex

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2010.513375

Integration and excision of bacteriophage lambda: the mechanism of conservation site specific recombination

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2010.513375

Catalysis of site-specific recombination by Tn3 resolvase.

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2010.513375

Insights from the Structure of a Smallpox Virus Topoisomerase-DNA Transition State Mimic

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2010.513375

DNA arms do the legwork to ensure the directionality of lambda site-specific recombination

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2010.513375

Crystal structures of human topoisomerase I in covalent and noncovalent complexes with DNA

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2010.513375

Transposon-mediated site-specific recombination in vitro: DNA cleavage and protein-DNA linkage at the recombination site

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2010.513375

Crystal structure and putative function of small Toprim domain-containing protein from Bacillus stearothermophilus

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2010.513375

Regulatory mutations in Sin recombinase support a structure-based model of the synaptosome.

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2010.513375

Stepwise dissection of the Hin-catalyzed recombination reaction from synapsis to resolution

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2010.513375

DNA topoisomerases: harnessing and constraining energy to govern chromosome topology

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2010.513375

A model for the gamma delta resolvase synaptic complex

21 January 2018

2 references

https://api.crossref.org/works/10.3109%2F10409238.2010.513375

21 January 2018

12 December 2020

A novel and unified two-metal mechanism for DNA cleavage by type II and IA topoisomerases

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2010.513375

Recombination and chromosome segregation.

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2010.513375

Phase Variation: Evolution of a Controlling Element

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2010.513375

Site-specific recombination by phiC31 integrase and other large serine recombinases.

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2010.513375

Site-specific recombination by Tn3 resolvase: topological changes in the forward and reverse reactions

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2010.513375

Crystal structure of the site-specific recombinase, XerD.

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2010.513375

Mechanistic study ofE. coliDNA topoisomerase I: cleavage of oligonucleotides

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2010.513375

DNA inversions in phages and bacteria

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2010.513375

A structural view of cre-loxp site-specific recombination

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2010.513375

Conformational and thermodynamic properties of supercoiled DNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2010.513375

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2010.513375

Cellular roles of dna topoisomerases: a molecular perspective

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2010.513375

Identification of a potential general acid/base in the reversible phosphoryl transfer reactions catalyzed by tyrosine recombinases: Flp H305.

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2010.513375

The role of histidine 632 in catalysis by human topoisomerase I.

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2010.513375

Recombinational Switch for Gene Expression

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2010.513375

Structural Basis for Specificity in the Poxvirus Topoisomerase

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2010.513375

Structural basis for broad DNA-specificity in integron recombination

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409238.2010.513375

Discovery of a predicted DNA knot substantiates a model for site-specific recombination

21 January 2018

1 reference

12 December 2020

Crystal structure of a Flp recombinase-Holliday junction complex: assembly of an active oligomer by helix swapping

1 reference

12 December 2020

Isolation and characterization of the Tn3 resolvase synaptic intermediate

1 reference

12 December 2020

Analysis of a nucleoprotein complex: the synaptosome of gamma delta resolvase

1 reference

12 December 2020

Protein-protein interactions directing resolvase site-specific recombination: a structure-function analysis.

1 reference

12 December 2020

Vaccinia DNA topoisomerase I: evidence supporting a free rotation mechanism for DNA supercoil relaxation

1 reference

12 December 2020

The crystal structure of the catalytic domain of the site-specific recombination enzyme gamma delta resolvase at 2.7 A resolution

1 reference

12 December 2020

Type II DNA topoisomerases: enzymes that can unknot a topologically knotted DNA molecule via a reversible double-strand break

1 reference

12 December 2020

Crystal structure of the site-specific recombinase gamma delta resolvase complexed with a 34 bp cleavage site

1 reference

12 December 2020

Geometric arrangements of Tn3 resolvase sites

1 reference

12 December 2020

Mutants of the gamma delta resolvase: a genetic analysis of the recombination function

1 reference

12 December 2020

Architecture of the gamma delta resolvase synaptosome: oriented heterodimers identity interactions essential for synapsis and recombination

1 reference

12 December 2020

The acidic triad conserved in type IA DNA topoisomerases is required for binding of Mg(II) and subsequent conformational change

1 reference

12 December 2020

Model for a DNA-mediated synaptic complex suggested by crystal packing of gamma delta resolvase subunits

1 reference

12 December 2020

Sin recombinase from Staphylococcus aureus: synaptic complex architecture and transposon targeting

1 reference

12 December 2020

Transposon Tn21, flagship of the floating genome

1 reference

12 December 2020

Catalysis by site-specific recombinases

1 reference

12 December 2020

Specific DNA cleavage and binding by vaccinia virus DNA topoisomerase I.

1 reference

12 December 2020

Solution structure of the Tn3 resolvase-crossover site synaptic complex

1 reference

12 December 2020

Formation and resolution of DNA catenanes by DNA gyrase

1 reference

12 December 2020

Catalytic residues of gamma delta resolvase act in cis

1 reference

12 December 2020

Mycobacteriophage Bxb1 integrates into the Mycobacterium smegmatis groEL1 gene

1 reference

12 December 2020

10.3109/10409238.2010.513375

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=PMCID:PMC6290911&resulttype=core&format=json

13 May 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=PMCID:PMC6290911&resulttype=core&format=json

13 May 2020

1 reference