Genome analysis of Hibiscus syriacus provides insights of polyploidization and indeterminate flowering in woody plants (Q37738348)

22 August 2017

Genome analysis of Hibiscus syriacus provides insights of polyploidization and indeterminate flowering in woody plants (English)

1 reference

22 August 2017

Hibiscus syriacus

1 reference

based on heuristic

inferred from title

whole genome duplication

1 reference

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28011721%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

author name string

Yong-Min Kim

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28011721%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

Seungill Kim

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28011721%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

Namjin Koo

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28011721%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

Ah-Young Shin

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28011721%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

Eunyoung Seo

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28011721%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

Seong-Jin Park

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28011721%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

Won-Hee Kang

8

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28011721%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

Myung-Shin Kim

9

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28011721%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

Jieun Park

10

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28011721%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

Insu Jang

11

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28011721%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

Pan-Gyu Kim

12

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28011721%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

Iksu Byeon

13

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28011721%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

Min-Seo Kim

14

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28011721%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

JinHyuk Choi

15

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28011721%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

Gunhwan Ko

16

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28011721%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

JiHye Hwang

17

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28011721%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

Tae-Jin Yang

18

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28011721%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

Sang-Bong Choi

19

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28011721%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

Je Min Lee

20

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28011721%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

Ki-Byung Lim

21

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28011721%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

Jungho Lee

22

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28011721%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

Ik-Young Choi

23

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28011721%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

Beom-Seok Park

24

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28011721%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

Suk-Yoon Kwon

25

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28011721%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

Doil Choi

26

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28011721%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

Ryan W Kim

27

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28011721%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

publication date

22 December 2016

1 reference

22 August 2017

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28011721%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

volume

24

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28011721%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

issue

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28011721%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

page(s)

71-80

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28011721%20AND%20SRC:MED&resulttype=core&format=json

Genome-Wide Comparative Analyses Reveal the Dynamic Evolution of Nucleotide-Binding Leucine-Rich Repeat Gene Family among Solanaceae Plants

8 June 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5381346

Polyploidy and genome evolution in plants

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5381346

BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5381346

Genome sequence of the cultivated cotton Gossypium arboreum

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5381346

Efficient de novo assembly of highly heterozygous genomes from whole-genome shotgun short reads.

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5381346

Genome-wide analysis of the RNA helicase gene family in Gossypium raimondii

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5381346

InterProScan 5: genome-scale protein function classification

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5381346

Genome sequence of the hot pepper provides insights into the evolution of pungency in Capsicum species

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5381346

Pfam: the protein families database

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5381346

Whole genome duplication events in plant evolution reconstructed and predicted using myosin motor proteins

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5381346

Update on activities at the Universal Protein Resource (UniProt) in 2013

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5381346

Bayesian phylogenetics with BEAUti and the BEAST 1.7

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5381346

MCScanX: a toolkit for detection and evolutionary analysis of gene synteny and collinearity

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5381346

The Pfam protein families database

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5381346

NCBI Reference Sequences (RefSeq): current status, new features and genome annotation policy

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5381346

FLASH: fast length adjustment of short reads to improve genome assemblies

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5381346

Genome sequence and analysis of the tuber crop potato

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5381346

HMMER web server: interactive sequence similarity searching

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5381346

The genome of Theobroma cacao

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5381346

Scaffolding pre-assembled contigs using SSPACE

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5381346

SolexaQA: At-a-glance quality assessment of Illumina second-generation sequencing data

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5381346

TIR-NBS-LRR genes are rare in monocots: evidence from diverse monocot orders.

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5381346

Plants with double genomes might have had a better chance to survive the Cretaceous-Tertiary extinction event

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5381346

The conditioned reconstructed process

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5381346

Automated eukaryotic gene structure annotation using EVidenceModeler and the Program to Assemble Spliced Alignments

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5381346

Consequences of genome duplication

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5381346

The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5381346

CEGMA: a pipeline to accurately annotate core genes in eukaryotic genomes

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5381346

AUGUSTUS: ab initio prediction of alternative transcripts

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5381346

Two rounds of whole genome duplication in the ancestral vertebrate

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5381346

23 August 2017

GeneWise and Genomewise

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5381346

OrthoMCL: Identification of Ortholog Groups for Eukaryotic Genomes

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5381346

Plant disease resistance genes: recent insights and potential applications.

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5381346

InterProScan--an integration platform for the signature-recognition methods in InterPro

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5381346

Plant pathogens and integrated defence responses to infection

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5381346

Trends, Rhythms, and Aberrations in Global Climate 65 Ma to Present

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5381346

Broad-spectrum mildew resistance in Arabidopsis thaliana mediated by RPW8.

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5381346

Polyploid Incidence and Evolution

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5381346

SMART, a simple modular architecture research tool: identification of signaling domains

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5381346

Predicting coiled coils from protein sequences

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5381346

Fractionation and subfunctionalization following genome duplications: mechanisms that drive gene content and their consequences

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5381346

Plant NB-LRR proteins: tightly regulated sensors in a complex manner.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5381346

Capturing sequence variation among flowering-time regulatory gene homologs in the allopolyploid crop species Brassica napus

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5381346

The draft genome of a diploid cotton Gossypium raimondii

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5381346

Phylogeny-aware alignment with PRANK.

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5381346

PlnTFDB: updated content and new features of the plant transcription factor database

1 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5381346

Deciduous shrubs for ozone bioindication: Hibiscus syriacus as an example

1 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5381346

Tracker: continuous HMMER and BLAST searching.

1 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5381346

Genome-wide analysis of NBS-LRR-encoding genes in Arabidopsis.

1 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5381346

Divergent evolution of plant NBS-LRR resistance gene homologues in dicot and cereal genomes

1 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5381346

Choosing Appropriate Substitution Models for the Phylogenetic Analysis of Protein-Coding Sequences

1 September 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FDNARES%2FDSW049

Genome sequence of cultivated Upland cotton (Gossypium hirsutum TM-1) provides insights into genome evolution

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FDNARES%2FDSW049

Three naphthalenes from root bark of Hibiscus syriacus

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/28011721

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/DNARES/DSW049

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28011721%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28011721%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

PubMed publication ID

28011721

1 reference