The ubiquitin-26S proteasome system at the nexus of plant biology (Q37474364)

20 August 2017

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title

The ubiquitin-26S proteasome system at the nexus of plant biology (English)

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ubiquitin-proteasome system

20 August 2017

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author name string

Richard D Vierstra

series ordinal

1

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20 August 2017

8 May 2009

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Nature Reviews Molecular Cell Biology

20 August 2017

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20 August 2017

10

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20 August 2017

385-397

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20 August 2017

6

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https://scigraph.springernature.com/pub.10.1038/nrm2688

20 August 2017

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cites work

Post-translational regulation in plants employing a diverse set of polypeptide tags

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Modification of proteins by ubiquitin and ubiquitin-like proteins

31 March 2020

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The ubiquitin 26S proteasome proteolytic pathway

31 March 2020

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Structural complexity in ubiquitin recognition.

31 March 2020

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Proteasome-independent functions of ubiquitin in endocytosis and signaling

31 March 2020

1 reference

Ubiquitin, hormones and biotic stress in plants

31 March 2020

1 reference

Ubiquitin receptors and ERAD: a network of pathways to the proteasome

31 March 2020

1 reference

The E3 ligase AtCHIP ubiquitylates FtsH1, a component of the chloroplast FtsH protease, and affects protein degradation in chloroplasts.

31 March 2020

1 reference

The ubiquitin-specific protease family from Arabidopsis. AtUBP1 and 2 are required for the resistance to the amino acid analog canavanine.

31 March 2020

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Cullin-containing E3 ubiquitin ligases in plant development

31 March 2020

1 reference

Cullins 3a and 3b assemble with members of the broad complex/tramtrack/bric-a-brac (BTB) protein family to form essential ubiquitin-protein ligases (E3s) in Arabidopsis.

31 March 2020

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The HECT ubiquitin-protein ligase (UPL) family in Arabidopsis: UPL3 has a specific role in trichome development.

31 March 2020

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First glance at the plant APC/C, a highly conserved ubiquitin-protein ligase

31 March 2020

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Genome analysis and functional characterization of the E2 and RING-type E3 ligase ubiquitination enzymes of Arabidopsis

31 March 2020

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Functional analysis of the RING-type ubiquitin ligase family of Arabidopsis.

31 March 2020

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Characterization of Arabidopsis and rice DWD proteins and their roles as substrate receptors for CUL4-RING E3 ubiquitin ligases

31 March 2020

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The F-box subunit of the SCF E3 complex is encoded by a diverse superfamily of genes in Arabidopsis

31 March 2020

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A large complement of the predicted Arabidopsis ARM repeat proteins are members of the U-box E3 ubiquitin ligase family

31 March 2020

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Biochemical function of typical and variant Arabidopsis thaliana U-box E3 ubiquitin-protein ligases

31 March 2020

1 reference

Large-scale, lineage-specific expansion of a bric-a-brac/tramtrack/broad complex ubiquitin-ligase gene family in rice.

31 March 2020

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F-box proteins in rice. Genome-wide analysis, classification, temporal and spatial gene expression during panicle and seed development, and regulation by light and abiotic stress

31 March 2020

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The F-box gene family is expanded in herbaceous annual plants relative to woody perennial plants.

31 March 2020

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KEEP ON GOING, a RING E3 ligase essential for Arabidopsis growth and development, is involved in abscisic acid signaling

31 March 2020

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Regulation of cullin RING ligases

31 March 2020

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Genetic analysis of CAND1-CUL1 interactions in Arabidopsis supports a role for CAND1-mediated cycling of the SCFTIR1 complex

31 March 2020

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31 March 2020

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Purification of the Arabidopsis 26 S proteasome: biochemical and molecular analyses revealed the presence of multiple isoforms

31 March 2020

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The RPN5 subunit of the 26s proteasome is essential for gametogenesis, sporophyte development, and complex assembly in Arabidopsis.

31 March 2020

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The 26S proteasome: a molecular machine designed for controlled proteolysis

31 March 2020

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Proteasome subunit Rpn13 is a novel ubiquitin receptor

31 March 2020

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Promotion of NEDD-CUL1 conjugate cleavage by COP9 signalosome

31 March 2020

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Multiubiquitin chain binding and protein degradation are mediated by distinct domains within the 26 S proteasome subunit Mcb1.

31 March 2020

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The pleiotropic role of the 26S proteasome subunit RPN10 in Arabidopsis growth and development supports a substrate-specific function in abscisic acid signaling.

31 March 2020

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Cytokinin growth responses in Arabidopsis involve the 26S proteasome subunit RPN12.

31 March 2020

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The RPN1 subunit of the 26S proteasome in Arabidopsis is essential for embryogenesis.

31 March 2020

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The HALTED ROOT gene encoding the 26S proteasome subunit RPT2a is essential for the maintenance of Arabidopsis meristems.

31 March 2020

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O-GlcNAc modification is an endogenous inhibitor of the proteasome

31 March 2020

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Proteasome-associated proteins: regulation of a proteolytic machine

31 March 2020

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26S proteasome regulatory particle mutants have increased oxidative stress tolerance

31 March 2020

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PA200, a nuclear proteasome activator involved in DNA repair

31 March 2020

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The ubiquitin-specific protease UBP14 is essential for early embryo development in Arabidopsis thaliana.

31 March 2020

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Deubiquitinating enzyme Ubp6 functions noncatalytically to delay proteasomal degradation.

31 March 2020

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The ubiquitin-specific protease subfamily UBP3/UBP4 is essential for pollen development and transmission in Arabidopsis

31 March 2020

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Ubiquitin C-terminal hydrolases 1 and 2 affect shoot architecture in Arabidopsis

31 March 2020

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Control of DNA methylation and heterochromatic silencing by histone H2B deubiquitination

31 March 2020

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UBIQUITIN-SPECIFIC PROTEASE 26 is required for seed development and the repression of PHERES1 in Arabidopsis.

31 March 2020

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The ubiquitin-activating enzyme (E1) gene family in Arabidopsis thaliana.

31 March 2020

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Systematic analysis and nomenclature of mammalian F-box proteins

31 March 2020

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The ubiquitin/26S proteasome pathway, the complex last chapter in the life of many plant proteins

31 March 2020

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Rapid degradation of a large fraction of newly synthesized proteins by proteasomes.

31 March 2020

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Unravelling angiosperm genome evolution by phylogenetic analysis of chromosomal duplication events

31 March 2020

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The hidden duplication past of Arabidopsis thaliana

31 March 2020

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Common sequence polymorphisms shaping genetic diversity in Arabidopsis thaliana

31 March 2020

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TOPLESS mediates auxin-dependent transcriptional repression during Arabidopsis embryogenesis

31 March 2020

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The Arabidopsis F-box protein TIR1 is an auxin receptor

31 March 2020

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Plant development is regulated by a family of auxin receptor F box proteins

31 March 2020

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The F-box protein TIR1 is an auxin receptor

31 March 2020

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Mechanism of auxin perception by the TIR1 ubiquitin ligase

31 March 2020

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Small-molecule agonists and antagonists of F-box protein-substrate interactions in auxin perception and signaling

31 March 2020

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COI1: an Arabidopsis gene required for jasmonate-regulated defense and fertility

31 March 2020

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JAZ repressor proteins are targets of the SCFCOI1 complex during jasmonate signalling

31 March 2020

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The JAZ family of repressors is the missing link in jasmonate signalling.

31 March 2020

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COI1 is a critical component of a receptor for jasmonate and the bacterial virulence factor coronatine

31 March 2020

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The DELLA domain of GA INSENSITIVE mediates the interaction with the GA INSENSITIVE DWARF1A gibberellin receptor of Arabidopsis.

31 March 2020

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Molecular interactions of a soluble gibberellin receptor, GID1, with a rice DELLA protein, SLR1, and gibberellin

31 March 2020

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Structural basis for gibberellin recognition by its receptor GID1

31 March 2020

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Gibberellin-induced DELLA recognition by the gibberellin receptor GID1

31 March 2020

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MAPK phosphorylation-induced stabilization of ACS6 protein is mediated by the non-catalytic C-terminal domain, which also contains the cis-determinant for rapid degradation by the 26S proteasome pathway.

31 March 2020

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The ACC synthase TOE sequence is required for interaction with ETO1 family proteins and destabilization of target proteins.

31 March 2020

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The eto1, eto2, and eto3 mutations and cytokinin treatment increase ethylene biosynthesis in Arabidopsis by increasing the stability of ACS protein

31 March 2020

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Regulation of ethylene gas biosynthesis by the Arabidopsis ETO1 protein.

31 March 2020

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The BTB ubiquitin ligases ETO1, EOL1 and EOL2 act collectively to regulate ethylene biosynthesis in Arabidopsis by controlling type-2 ACC synthase levels

31 March 2020

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Ligand-induced degradation of the ethylene receptor ETR2 through a proteasome-dependent pathway in Arabidopsis

31 March 2020

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Interplay between ethylene, ETP1/ETP2 F-box proteins, and degradation of EIN2 triggers ethylene responses in Arabidopsis

31 March 2020

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The Arabidopsis EIN3 binding F-Box proteins EBF1 and EBF2 have distinct but overlapping roles in ethylene signaling

31 March 2020

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Arabidopsis EIN3-binding F-box 1 and 2 form ubiquitin-protein ligases that repress ethylene action and promote growth by directing EIN3 degradation

31 March 2020

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Plant responses to ethylene gas are mediated by SCF(EBF1/EBF2)-dependent proteolysis of EIN3 transcription factor.

31 March 2020

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EIN3-dependent regulation of plant ethylene hormone signaling by two arabidopsis F box proteins: EBF1 and EBF2.

31 March 2020

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Differential regulation of EIN3 stability by glucose and ethylene signalling in plants

31 March 2020

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Dual control of nuclear EIN3 by bifurcate MAPK cascades in C2H4 signalling

31 March 2020

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The exoribonuclease XRN4 is a component of the ethylene response pathway in Arabidopsis

31 March 2020

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Ethylene signaling in Arabidopsis involves feedback regulation via the elaborate control of EBF2 expression by EIN3.

31 March 2020

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ETHYLENE-INSENSITIVE5 encodes a 5'-->3' exoribonuclease required for regulation of the EIN3-targeting F-box proteins EBF1/2.

31 March 2020

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MAX2 participates in an SCF complex which acts locally at the node to suppress shoot branching

31 March 2020

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Strigolactone inhibition of shoot branching

31 March 2020

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Inhibition of shoot branching by new terpenoid plant hormones

31 March 2020

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The AIP2 E3 ligase acts as a novel negative regulator of ABA signaling by promoting ABI3 degradation

31 March 2020

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Arabidopsis DREB2A-interacting proteins function as RING E3 ligases and negatively regulate plant drought stress-responsive gene expression

31 March 2020

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The E3 ubiquitin ligase BIG BROTHER controls arabidopsis organ size in a dosage-dependent manner.

31 March 2020

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Control of final seed and organ size by the DA1 gene family in Arabidopsis thaliana

31 March 2020

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Control of plant germline proliferation by SCFFBL17 degradation of cell cycle inhibitors

31 March 2020

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The BLADE-ON-PETIOLE genes are essential for abscission zone formation in Arabidopsis.

31 March 2020

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UFO in the Arabidopsis inflorescence apex is required for floral-meristem identity and bract suppression

31 March 2020

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Characterization of the VIER F-BOX PROTEINE genes from Arabidopsis reveals their importance for plant growth and development.

31 March 2020

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Ubiquitin lysine 63 chain forming ligases regulate apical dominance in Arabidopsis

31 March 2020

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Regulated proteolysis in light signaling

31 March 2020

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Sequences within both the N- and C-terminal domains of phytochrome A are required for PFR ubiquitination and degradation

31 March 2020

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Arabidopsis cryptochrome 2 completes its posttranslational life cycle in the nucleus.

31 March 2020

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Photoactivated phytochrome induces rapid PIF3 phosphorylation prior to proteasome-mediated degradation.

31 March 2020

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Targeted destabilization of HY5 during light-regulated development of Arabidopsis.

31 March 2020

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Arabidopsis COP1 shapes the temporal pattern of CO accumulation conferring a photoperiodic flowering response

31 March 2020

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Targeted degradation of TOC1 by ZTL modulates circadian function in Arabidopsis thaliana

31 March 2020

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FKF1 and GIGANTEA complex formation is required for day-length measurement in Arabidopsis

31 March 2020

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FKF1 F-box protein mediates cyclic degradation of a repressor of CONSTANS in Arabidopsis

31 March 2020

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ZEITLUPE is a circadian photoreceptor stabilized by GIGANTEA in blue light.

31 March 2020

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31 March 2020

The plant immune system

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The RAR1 interactor SGT1, an essential component of R gene-triggered disease resistance

31 March 2020

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Regulatory Role of SGT1 in Early R Gene-Mediated Plant Defenses

31 March 2020

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The U-box protein CMPG1 is required for efficient activation of defense mechanisms triggered by multiple resistance genes in tobacco and tomato.

31 March 2020

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Negative regulation of PAMP-triggered immunity by an E3 ubiquitin ligase triplet in Arabidopsis

31 March 2020

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Plant immunity requires conformational changes [corrected] of NPR1 via S-nitrosylation and thioredoxins

31 March 2020

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A bacterial inhibitor of host programmed cell death defenses is an E3 ubiquitin ligase

31 March 2020

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A bacterial E3 ubiquitin ligase targets a host protein kinase to disrupt plant immunity

31 March 2020

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The Polerovirus F box protein P0 targets ARGONAUTE1 to suppress RNA silencing

31 March 2020

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The Polerovirus silencing suppressor P0 targets ARGONAUTE proteins for degradation.

31 March 2020

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Ralstonia solanacearum requires F-box-like domain-containing type III effectors to promote disease on several host plants

31 March 2020

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Involvement of targeted proteolysis in plant genetic transformation by Agrobacterium

31 March 2020

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ARC1 is an E3 ubiquitin ligase and promotes the ubiquitination of proteins during the rejection of self-incompatible Brassica pollen

31 March 2020

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Interactions between the S-domain receptor kinases and AtPUB-ARM E3 ubiquitin ligases suggest a conserved signaling pathway in Arabidopsis.

31 March 2020

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Identification of the pollen determinant of S-RNase-mediated self-incompatibility

31 March 2020

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AhSSK1, a novel SKP1-like protein that interacts with the S-locus F-box protein SLF.

31 March 2020

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Identification and characterization of components of a putative petunia S-locus F-box-containing E3 ligase complex involved in S-RNase-based self-incompatibility.

31 March 2020

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Comparison of Petunia inflata S-Locus F-box protein (Pi SLF) with Pi SLF like proteins reveals its unique function in S-RNase based self-incompatibility

31 March 2020

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Histone ubiquitination: triggering gene activity

31 March 2020

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The Arabidopsis thaliana homolog of yeast BRE1 has a function in cell cycle regulation during early leaf and root growth.

31 March 2020

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The absence of histone H2B monoubiquitination in the Arabidopsis hub1 (rdo4) mutant reveals a role for chromatin remodeling in seed dormancy.

31 March 2020

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ORTH/VIM proteins that regulate DNA methylation are functional ubiquitin E3 ligases

31 March 2020

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A proteomics approach to understanding protein ubiquitination

31 March 2020

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Proteomic identification of ubiquitinated proteins from human cells expressing His-tagged ubiquitin

31 March 2020

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Large-scale analysis of the human ubiquitin-related proteome

31 March 2020

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Quantitative profiling of ubiquitylated proteins reveals proteasome substrates and the substrate repertoire influenced by the Rpn10 receptor pathway

31 March 2020

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A subset of membrane-associated proteins is ubiquitinated in response to mutations in the endoplasmic reticulum degradation machinery

31 March 2020

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Multidimensional Protein Identification Technology (MudPIT) Analysis of Ubiquitinated Proteins in Plants

31 March 2020

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Tandem affinity purification and mass spectrometric analysis of ubiquitylated proteins in Arabidopsis

31 March 2020

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A rice kinase-protein interaction map

31 March 2020

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MAX1 and MAX2 control shoot lateral branching in Arabidopsis.

31 March 2020

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19424292

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Ubiquitin is the ATP-dependent proteolysis factor I of rabbit reticulocytes

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19424292

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Comparison of the three-dimensional structures of human, yeast, and oat ubiquitin

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19424292

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1038/NRM2688

1 reference

20 August 2017

1 reference

PubMed ID

19424292