Parallel recruitment of multiple genes into c4 photosynthesis (Q37354184)

19 August 2017

Parallel recruitment of multiple genes into c4 photosynthesis (English)

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19 August 2017

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19 August 2017

Pascal-Antoine Christin

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Pascal-Antoine Christin

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19 August 2017

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Colin P Osborne

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19 August 2017

Susanna F Boxall

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19 August 2017

Richard Gregory

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19 August 2017

Erika J Edwards

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19 August 2017

1 January 2013

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Genome Biology and Evolution

19 August 2017

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19 August 2017

5

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2174-2187

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describes a project that uses

19 August 2017

MIRA

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MIRA

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CZ Software Mentions: A large dataset of software mentions in the biomedical literature

cites work

Genomic analysis of a key innovation in an experimental Escherichia coli population

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Gene duplication, genome duplication, and the functional diversification of vertebrate globins

9 September 2017

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Characterizing regulatory and functional differentiation between maize mesophyll and bundle sheath cells by transcriptomic analysis

9 September 2017

1 reference

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Parallel genetic changes and nonparallel gene-environment interactions characterize the evolution of drug resistance in yeast

9 September 2017

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Reference genome sequence of the model plant Setaria

9 September 2017

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Photorespiration and the evolution of C4 photosynthesis

9 September 2017

1 reference

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Fast gapped-read alignment with Bowtie 2

9 September 2017

1 reference

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Adaptive evolution of C(4) photosynthesis through recurrent lateral gene transfer.

9 September 2017

1 reference

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New grass phylogeny resolves deep evolutionary relationships and discovers C4 origins

9 September 2017

1 reference

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Diversity of Kranz anatomy and biochemistry in C4 eudicots

9 September 2017

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The C(4) plant lineages of planet Earth

9 September 2017

1 reference

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The molecular evolution of β-carbonic anhydrase in Flaveria

9 September 2017

1 reference

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The role of proteins in C(3) plants prior to their recruitment into the C(4) pathway

9 September 2017

1 reference

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Old gene duplication facilitates origin and diversification of an innovative communication system--twice

9 September 2017

1 reference

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Can phylogenetics identify C(4) origins and reversals?

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3845648

Evolutionary insights on C4 photosynthetic subtypes in grasses from genomics and phylogenetics

9 September 2017

1 reference

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The regulation of gene expression required for C4 photosynthesis

9 September 2017

1 reference

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Lineage-specific patterns of functional diversification in the alpha- and beta-globin gene families of tetrapod vertebrates

9 September 2017

1 reference

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Gene duplication and evolutionary novelty in plants

9 September 2017

1 reference

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Comparative genomic analysis of C4 photosynthetic pathway evolution in grasses

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3845648

How confident can we be that orthologs are similar, but paralogs differ?

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3845648

Wings, horns, and butterfly eyespots: how do complex traits evolve?

9 September 2017

1 reference

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Evolution of F-box genes in plants: different modes of sequence divergence and their relationships with functional diversification

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3845648

A molecular phylogeny of the genus Alloteropsis (Panicoideae, Poaceae) suggests an evolutionary reversion from C4 to C3 photosynthesis

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3845648

Tests of parallel molecular evolution in a long-term experiment with Escherichia coli

9 September 2017

1 reference

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Photosynthetic Characteristics of Portulaca grandiflora, a Succulent C(4) Dicot : CELLULAR COMPARTMENTATION OF ENZYMES AND ACID METABOLISM.

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3845648

Darwinian evolution can follow only very few mutational paths to fitter proteins

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3845648

Sodium channel genes and the evolution of diversity in communication signals of electric fishes: convergent molecular evolution

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3845648

Concerted and birth-and-death evolution of multigene families

9 September 2017

1 reference

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Conservation and divergence of circadian clock operation in a stress-inducible Crassulacean acid metabolism species reveals clock compensation against stress

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3845648

Using the miraEST assembler for reliable and automated mRNA transcript assembly and SNP detection in sequenced ESTs

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3845648

MUSCLE: multiple sequence alignment with high accuracy and high throughput

9 September 2017

1 reference

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9 September 2017

1 reference

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A Simple, Fast, and Accurate Algorithm to Estimate Large Phylogenies by Maximum Likelihood

9 September 2017

1 reference

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Evolution of C4 phosphoenolpyruvate carboxylase

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3845648

Maize C4 and non-C4 NADP-dependent malic enzymes are encoded by distinct genes derived from a plastid-localized ancestor

9 September 2017

1 reference

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Gene co-option in physiological and morphological evolution

9 September 2017

1 reference

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Phosphoenolpyruvate carboxykinase is involved in the decarboxylation of aspartate in the bundle sheath of maize

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3845648

ChloroP, a neural network-based method for predicting chloroplast transit peptides and their cleavage sites

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3845648

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3845648

Properties and regulation of leaf nicotinamide-adenine dinucleotide phosphate-malate dehydrogenase and 'malic' enzyme in plants with the C4-dicarboxylic acid pathway of photosynthesis

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3845648

A new enzyme for the interconversion of pyruvate and phosphopyruvate and its role in the C4 dicarboxylic acid pathway of photosynthesis

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3845648

Molecular mechanisms underlying the differential expression of maize pyruvate, orthophosphate dikinase genes

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3845648

Gene family evolution in green plants with emphasis on the origination and evolution of Arabidopsis thaliana genes.

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3845648

Systems analysis of a maize leaf developmental gradient redefines the current C4 model and provides candidates for regulation.

26 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3845648

Kinetics and functional diversity among the five members of the NADP-malic enzyme family from Zea mays, a C4 species.

26 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3845648

Multiple Arabidopsis genes primed for recruitment into C₄ photosynthesis

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3845648

Evolution of C4 photosynthesis in the genus Flaveria: how many and which genes does it take to make C4?

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3845648

Evolution of the C(4) photosynthetic mechanism: are there really three C(4) acid decarboxylation types?

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3845648

The developmental dynamics of the maize leaf transcriptome

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3845648

Causes and evolutionary significance of genetic convergence.

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3845648

Repeated co-options of exoskeleton formation during wing-to-elytron evolution in beetles.

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3845648

Evolution of C(4) phosphoenolpyruvate carboxykinase in grasses, from genotype to phenotype

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3845648

Comparative proteomics of chloroplast envelopes from C3 and C4 plants reveals specific adaptations of the plastid envelope to C4 photosynthesis and candidate proteins required for maintaining C4 metabolite fluxes.

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3845648

Oligocene CO2 decline promoted C4 photosynthesis in grasses.

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3845648

C4 Photosynthesis evolved in grasses via parallel adaptive genetic changes.

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3845648

Phosphoenolpyruvate carboxykinase in Arabidopsis: changes in gene expression, protein and activity during vegetative and reproductive development.

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3845648

Comparison of leaf structure and photosynthetic characteristics of C3 and C4 Alloteropsis semialata subspecies.

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3845648

The Arabidopsis PPDK gene is transcribed from two promoters to produce differentially expressed transcripts responsible for cytosolic and plastidic proteins.

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3845648

Multiple forms of plant phosphoenolpyruvate carboxylase associated with different metabolic pathways

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3845648

Phosphoenolpyruvate carboxykinase in the C(4) monocot Urochloa panicoides is encoded by four differentially expressed genes.

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3845648

An mRNA blueprint for C4 photosynthesis derived from comparative transcriptomics of closely related C3 and C4 species

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3845648

Photosynthetic Metabolism of Aspartate in Mesophyll and Bundle Sheath Cells Isolated from Digitaria sanguinalis (L.) Scop., a NADP-Malic Enzyme C(4) Plant

2 October 2018

1 reference

12 December 2020

Differential expression of C4 pathway genes in mesophyll and bundle sheath cells of greening maize leaves

1 reference

12 December 2020

Aspartate aminotransferase from Eleusine coracana, a C4 plant: purification, characterization, and preparation of antibody

1 reference

12 December 2020

Independent and Parallel Recruitment of Preexisting Mechanisms Underlying C4 Photosynthesis

1 reference

12 December 2020

Biochemical and cytological relationships in C4 plants

1 reference

12 December 2020

Identifiers

DOI

10.1093/GBE/EVT168

1 reference

19 August 2017

1 reference

19 August 2017

1 reference