Modeling cis-regulation with a compendium of genome-wide histone H3K27ac profiles. (Q37313704)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27466232%20AND%20SRC:MED&resulttype=core&format=json

19 March 2020

title

Modeling cis-regulation with a compendium of genome-wide histone H3K27ac profiles (English)

1 reference

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19 March 2020

0 references

1

1 reference

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19 March 2020

Chongzhi Zang

2

1 reference

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19 March 2020

Qian Qin

6

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19 March 2020

Housheng Hansen He

10

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19 March 2020

11

Myles Brown

1 reference

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19 March 2020

12

Clifford A Meyer

1 reference

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19 March 2020

3

Tengfei Xiao

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19 March 2020

author name string

Jingyu Fan

4

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19 March 2020

Shenglin Mei

5

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19 March 2020

Qiu Wu

7

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19 March 2020

Xujuan Li

8

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19 March 2020

Kexin Xu

9

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19 March 2020

X Shirley Liu

13

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19 March 2020

language of work or name

1 reference

27 July 2016

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19 March 2020

1 reference

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19 March 2020

volume

26

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19 March 2020

issue

10

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19 March 2020

page(s)

1417-1429

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describes a project that uses

19 March 2020

limma

1 reference

22 June 2022

https://europepmc.org/article/PMC/5052056

based on heuristic

inferred from PubMed Central ID database lookup

cites work

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Control of somatic tissue differentiation by the long non-coding RNA TINCR.

6 September 2017

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Predicting cell-type-specific gene expression from regions of open chromatin

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Architecture of the human regulatory network derived from ENCODE data

6 September 2017

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An expansive human regulatory lexicon encoded in transcription factor footprints

6 September 2017

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The accessible chromatin landscape of the human genome

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BET bromodomain inhibition targets both c-Myc and IL7R in high-risk acute lymphoblastic leukemia

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Transcription factors: from enhancer binding to developmental control

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6 September 2017

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The hypersensitive sites of the murine β-globin locus control region act independently to affect nuclear localization and transcriptional elongation

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6 September 2017

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6 September 2017

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6 September 2017

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Genome-wide analysis reveals conserved and divergent features of Notch1/RBPJ binding in human and murine T-lymphoblastic leukemia cells

6 September 2017

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Mapping and analysis of chromatin state dynamics in nine human cell types

6 September 2017

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6 September 2017

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6 September 2017

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6 September 2017

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6 September 2017

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6 September 2017

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6 September 2017

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6 September 2017

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6 September 2017

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6 September 2017

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Model-based analysis of ChIP-Seq (MACS)

6 September 2017

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Shadow enhancers as a source of evolutionary novelty

6 September 2017

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A hierarchical network of transcription factors governs androgen receptor-dependent prostate cancer growth

6 September 2017

1 reference

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Genome-wide maps of chromatin state in pluripotent and lineage-committed cells

6 September 2017

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Genome-wide mapping of in vivo protein-DNA interactions

6 September 2017

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High-resolution profiling of histone methylations in the human genome

6 September 2017

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Distinct and predictive chromatin signatures of transcriptional promoters and enhancers in the human genome

6 September 2017

1 reference

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A comparative analysis of genome-wide chromatin immunoprecipitation data for mammalian transcription factors

6 September 2017

1 reference

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Genome-wide analysis of estrogen receptor binding sites

6 September 2017

1 reference

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Linear models and empirical bayes methods for assessing differential expression in microarray experiments

6 September 2017

1 reference

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Genome-wide mapping of DNase hypersensitive sites using massively parallel signature sequencing (MPSS)

6 September 2017

1 reference

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The bromodomain protein Brd4 is a positive regulatory component of P-TEFb and stimulates RNA polymerase II-dependent transcription

6 September 2017

1 reference

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6 September 2017

1 reference

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Exploration, normalization, and summaries of high density oligonucleotide array probe level data

6 September 2017

1 reference

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The double bromodomain protein Brd4 binds to acetylated chromatin during interphase and mitosis

6 September 2017

1 reference

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A novel kinase, AATYK induces and promotes neuronal differentiation in a human neuroblastoma (SH-SY5Y) cell line

6 September 2017

1 reference

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P-TEFb, a cyclin-dependent kinase controlling elongation by RNA polymerase II

6 September 2017

1 reference

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Conservation of trans-acting circuitry during mammalian regulatory evolution

6 September 2017

1 reference

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Large-scale imputation of epigenomic datasets for systematic annotation of diverse human tissues

14 September 2017

1 reference

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PRC2 loss amplifies Ras-driven transcription and confers sensitivity to BRD4-based therapies

28 September 2017

1 reference

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Long-range regulation by shared retinoic acid response elements modulates dynamic expression of posterior Hoxb genes in CNS development

26 June 2018

1 reference

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Circuitry and dynamics of human transcription factor regulatory networks

26 June 2018

1 reference

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Zic3 enhances the generation of mouse induced pluripotent stem cells

26 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5052056

Brd2 is required for cell cycle exit and neuronal differentiation through the E2F1 pathway in mouse neuroepithelial cells.

2 September 2018

1 reference

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Transposable elements have rewired the core regulatory network of human embryonic stem cells

2 September 2018

1 reference

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2 September 2018

Identifiers

DOI

10.1101/GR.201574.115

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27466232%20AND%20SRC:MED&resulttype=core&format=json

19 March 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27466232%20AND%20SRC:MED&resulttype=core&format=json

19 March 2020

PubMed publication ID

27466232

1 reference