Widespread DNA hypomethylation and differential gene expression in Turner syndrome (Q37298582)

19 August 2017

Widespread DNA hypomethylation and differential gene expression in Turner syndrome (English)

1 reference

19 August 2017

9

1 reference

19 August 2017

3

Anne Skakkebæk

0 references

Torben Falck Ørntoft

8

Torben Falck Ørntoft

0 references

Christian Trolle

Christian Trolle

1

0 references

Søren Vang

Søren Vang

5

0 references

Iver Nordentoft

Iver Nordentoft

7

0 references

Claus H. Gravholt

Claus Højbjerg Gravholt

10

0 references

Morten Muhlig Nielsen

2

Morten Muhlig Nielsen

1 reference

19 August 2017

6

Jakob Hedegaard

1 reference

19 August 2017

Philippe Lamy

4

1 reference

PMCID

5043230

19 August 2017

language of work or name

English

0 references

publication date

30 September 2016

1 reference

19 August 2017

1 reference

19 August 2017

6

1 reference

19 August 2017

34220

1 reference

19 August 2017

1

1 reference

Creative Commons Attribution 4.0 International

22 June 2019

copyright license

start time

30 September 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

describes a project that uses

ggplot2

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/efetch.fcgi?db=pmc&rettype=xml&id=5043230

ggplot2

2 references

10 June 2022

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

limma

1 reference

22 June 2022

https://europepmc.org/article/PMC/5043230

inferred from PubMed Central ID database lookup

edgeR

edgeR

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

DESeq2

DEseq

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

exact match

https://scigraph.springernature.com/pub.10.1038/srep34220

0 references

cites work

DNA methylation signature in peripheral blood reveals distinct characteristics of human X chromosome numerical aberrations

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5043230

Function and information content of DNA methylation

6 September 2017

1 reference

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Human 45,X fibroblast transcriptome reveals distinct differentially expressed genes including long noncoding RNAs potentially associated with the pathophysiology of Turner syndrome

6 September 2017

1 reference

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Amniotic fluid RNA gene expression profiling provides insights into the phenotype of Turner syndrome.

6 September 2017

1 reference

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Mammalian Y chromosomes retain widely expressed dosage-sensitive regulators

6 September 2017

1 reference

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X chromosome regulation: diverse patterns in development, tissues and disease

6 September 2017

1 reference

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Gene expression analysis of induced pluripotent stem cells from aneuploid chromosomal syndromes

6 September 2017

1 reference

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Sex differences in the human peripheral blood transcriptome

6 September 2017

1 reference

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Analysis of expressed SNPs identifies variable extents of expression from the human inactive X chromosome

6 September 2017

1 reference

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Epigenetic memory at embryonic enhancers identified in DNA methylation maps from adult mouse tissues

6 September 2017

1 reference

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A-clustering: a novel method for the detection of co-regulated methylation regions, and regions associated with exposure

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5043230

Count-based differential expression analysis of RNA sequencing data using R and Bioconductor

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5043230

Independent specialization of the human and mouse X chromosomes for the male germ line

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5043230

Female bias in Rhox6 and 9 regulation by the histone demethylase KDM6A

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5043230

Additional annotation enhances potential for biologically-relevant analysis of the Illumina Infinium HumanMethylation450 BeadChip array

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5043230

KDM6A point mutations cause Kabuki syndrome

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5043230

Cardiovascular phenotype in Turner syndrome--integrating cardiology, genetics, and endocrinology

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5043230

DNA methylation arrays as surrogate measures of cell mixture distribution

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5043230

Deletion of KDM6A, a histone demethylase interacting with MLL2, in three patients with Kabuki syndrome

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5043230

Methylation of L1Hs promoters is lower on the inactive X, has a tendency of being higher on autosomes in smaller genomes and shows inter-individual variability at some loci

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5043230

DNA methylation profiles of human active and inactive X chromosomes

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5043230

CpG islands and the regulation of transcription

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5043230

Dilation of the ascending aorta in Turner syndrome - a prospective cardiovascular magnetic resonance study

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5043230

Comparison of Beta-value and M-value methods for quantifying methylation levels by microarray analysis

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5043230

Dosage compensation and the global re-balancing of aneuploid genomes.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5043230

Escape from X inactivation in mice and humans

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5043230

GREAT improves functional interpretation of cis-regulatory regions

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5043230

A novel method to assess the full genome methylation profile using monoclonal antibody combined with the high throughput based microarray approach

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5043230

X-chromosome gene dosage and the risk of diabetes in Turner syndrome

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5043230

Mice with mutations of Dock7 have generalized hypopigmentation and white-spotting but show normal neurological function

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5043230

Studying early lethality of 45,XO (Turner's syndrome) embryos using human embryonic stem cells

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5043230

VSIG4, a B7 family-related protein, is a negative regulator of T cell activation

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5043230

CRIg: a macrophage complement receptor required for phagocytosis of circulating pathogens

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5043230

Congenital heart defects in Kabuki syndrome.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5043230

Reduced free IGF-I and increased IGFBP-3 proteolysis in Turner syndrome: modulation by female sex steroids

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5043230

X-linked immunodeficiency with hyper-IgM (XHIM).

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5043230

Evidence for a Turner syndrome locus or loci at Xp11.2-p22.1.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5043230

PHOG, a candidate gene for involvement in the short stature of Turner syndrome

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5043230

Relationship between the monosomy X phenotype and Y-linked ribosomal protein S4 (Rps4) in several species of mammals: a molecular evolutionary analysis of Rps4 homologs

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5043230

Ullrich-Turner syndrome is not caused by haploinsufficiency of RPS4X

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5043230

Functional equivalence of human X- and Y-encoded isoforms of ribosomal protein S4 consistent with a role in Turner syndrome

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5043230

Homologous ribosomal protein genes on the human X and Y chromosomes: escape from X inactivation and possible implications for Turner syndrome

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5043230

Methylation profile of genes on the human X chromosome

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5043230

Mammalian sex determination: thumbs down for zinc finger?

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5043230

Proceedings from the Turner Resource Network symposium: the crossroads of health care research and health care delivery.

26 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5043230

Induction of Timp1 in smooth muscle cells during development of abdominal aortic aneurysms.

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5043230

DNA methylation dynamics during in vivo differentiation of blood and skin stem cells

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5043230

Fragile X prenatal analyses show full mutation females at high risk for mosaic Turner syndrome: fragile X leads to chromosome loss.

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5043230

Increased prevalence of autoimmunity in Turner syndrome--influence of age.

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5043230

Pvclust: an R package for assessing the uncertainty in hierarchical clustering.

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5043230

Protein kinase X activates ureteric bud branching morphogenesis in developing mouse metanephric kidney

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5043230

Phenotype and X inactivation in 45,X/46,X,r(X) cases.

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5043230

The proportion of cells with functional X disomy is associated with the severity of mental retardation in mosaic ring X Turner syndrome females.

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5043230

Cloning of Z39Ig, a novel gene with immunoglobulin-like domains located on human chromosome X.

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5043230

Morbidity in Turner Syndrome

2 September 2018

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FSREP34220

Analysis of coding sequences for tissue inhibitor of metalloproteinases 1 (TIMP1) and 2 (TIMP2) in patients with aneurysms

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FSREP34220

Spontaneous abortion and subsequent Down syndrome livebirth

21 January 2018

1 reference

12 December 2020

Evidence for epigenetic alterations in Turner syndrome opens up feasibility of new pharmaceutical interventions

1 reference

12 December 2020

CLINICAL AND CYTOGENETICAL STUDIES IN FEMALE GONADAL DYSGENESIS AND THEIR BEARING ON THE CAUSE OF TURNER'S SYNDROME

1 reference

12 December 2020

Expression of RPS4X in fibroblasts from patients with structural aberrations of the X chromosome

1 reference

12 December 2020

Identifiers

DOI

10.1038/SREP34220

1 reference

19 August 2017

1 reference

19 August 2017

1 reference

PMCID

5043230