Integrative analysis of SF-1 transcription factor dosage impact on genome-wide binding and gene expression regulation (Q37236734)

19 August 2017

Integrative analysis of SF-1 transcription factor dosage impact on genome-wide binding and gene expression regulation (English)

1 reference

19 August 2017

5

Enzo Lalli

1 reference

19 August 2017

3

Marco Volante

1 reference

19 August 2017

4

Mauro Papotti

1 reference

19 August 2017

Mabrouka Doghman

1

1 reference

PMCID

3799431

19 August 2017

Bonald C Figueiredo

series ordinal

2

1 reference

PMCID

3799431

19 August 2017

language of work or name

English

0 references

publication date

1 August 2013

1 reference

19 August 2017

Nucleic Acids Research

1 reference

19 August 2017

41

1 reference

19 August 2017

19

1 reference

19 August 2017

8896-8907

1 reference

Creative Commons Attribution 3.0 Unported

19 August 2017

start time

4 October 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

Beyond steroidogenesis: novel target genes for SF-1 discovered by genomics

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Specific silencing of the REST target genes in insulin-secreting cells uncovers their participation in beta cell survival

9 September 2017

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Zebrafish rest regulates developmental gene expression but not neurogenesis

9 September 2017

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Knockdown of SF-1 and RNF31 affects components of steroidogenesis, TGFβ, and Wnt/β-catenin signaling in adrenocortical carcinoma cells.

9 September 2017

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A comprehensive view of nuclear receptor cancer cistromes

9 September 2017

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Open chromatin defined by DNaseI and FAIRE identifies regulatory elements that shape cell-type identity

9 September 2017

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Sterol O-acyltransferase 1 (SOAT1, ACAT) is a novel target of steroidogenic factor-1 (SF-1, NR5A1, Ad4BP) in the human adrenal

9 September 2017

1 reference

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ChIP-on-chip analysis reveals angiopoietin 2 (Ang2, ANGPT2) as a novel target of steroidogenic factor-1 (SF-1, NR5A1) in the human adrenal gland.

9 September 2017

1 reference

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Sole-Search: an integrated analysis program for peak detection and functional annotation using ChIP-seq data

9 September 2017

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Transgenic expression of Ad4BP/SF-1 in fetal adrenal progenitor cells leads to ectopic adrenal formation

9 September 2017

1 reference

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Molecular aspects of steroidogenic factor 1 (SF-1).

9 September 2017

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MEME SUITE: tools for motif discovery and searching

9 September 2017

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Regulation of aldosterone and cortisol production by the transcriptional repressor neuron restrictive silencer factor

9 September 2017

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Isolation of active regulatory elements from eukaryotic chromatin using FAIRE (Formaldehyde Assisted Isolation of Regulatory Elements).

9 September 2017

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An integrated software system for analyzing ChIP-chip and ChIP-seq data

9 September 2017

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Differential effects of high and low steroidogenic factor-1 expression on CYP11B2 expression and aldosterone production in adrenocortical cells

9 September 2017

1 reference

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Contributions of specificity protein-1 and steroidogenic factor 1 to Adcy4 expression in Y1 mouse adrenal cells

9 September 2017

1 reference

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Nuclear receptor location analyses in mammalian genomes: from gene regulation to regulatory networks

9 September 2017

1 reference

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Genome-wide mapping of in vivo protein-DNA interactions

9 September 2017

1 reference

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Chromatin immunoprecipitation and microarray-based analysis of protein location

9 September 2017

1 reference

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Heterozygous missense mutations in steroidogenic factor 1 (SF1/Ad4BP, NR5A1) are associated with 46,XY disorders of sex development with normal adrenal function.

9 September 2017

1 reference

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Crystal structure of the human LRH-1 DBD-DNA complex reveals Ftz-F1 domain positioning is required for receptor activity

9 September 2017

1 reference

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Changes in attitude, changes in latitude: nuclear receptors remodeling chromatin to regulate transcription

9 September 2017

1 reference

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A genetic screen for candidate tumor suppressors identifies REST

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3799431

NRSF regulates the fetal cardiac gene program and maintains normal cardiac structure and function

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3799431

Amplification and overexpression of androgen receptor gene in hormone-refractory prostate cancer

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3799431

Haploinsufficiency of steroidogenic factor-1 in mice disrupts adrenal development leading to an impaired stress response.

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3799431

Quantitative expression of Oct-3/4 defines differentiation, dedifferentiation or self-renewal of ES cells

9 September 2017

1 reference

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CoREST: a functional corepressor required for regulation of neural-specific gene expression

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3799431

Steroidogenic factor 1: a key determinant of endocrine development and function

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3799431

The orphan receptors NGFI-B and steroidogenic factor 1 establish monomer binding as a third paradigm of nuclear receptor-DNA interaction

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3799431

The neuron-restrictive silencer factor (NRSF): a coordinate repressor of multiple neuron-specific genes

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3799431

REST: a mammalian silencer protein that restricts sodium channel gene expression to neurons

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3799431

Mice deficient in the orphan receptor steroidogenic factor 1 lack adrenal glands and gonads but express P450 side-chain-cleavage enzyme in the placenta and have normal embryonic serum levels of corticosteroids

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3799431

A common trans-acting factor, Ad4-binding protein, to the promoters of steroidogenic P-450s

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3799431

Steroidogenic factor I, a key regulator of steroidogenic enzyme expression, is the mouse homolog of fushi tarazu-factor I.

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3799431

Increased steroidogenic factor-1 dosage triggers adrenocortical cell proliferation and cancer

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3799431

A new binding motif for the transcriptional repressor REST uncovers large gene networks devoted to neuronal functions.

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3799431

Nephroblastoma overexpressed/cysteine-rich protein 61/connective tissue growth factor/nephroblastoma overexpressed gene-3 (NOV/CCN3), a selective adrenocortical cell proapoptotic factor, is down-regulated in childhood adrenocortical tumors

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3799431

Increases in estrogen receptor-alpha concentration in breast cancer cells promote serine 118/104/106-independent AF-1 transactivation and growth in the absence of estrogen

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3799431

A naturally occurring steroidogenic factor-1 mutation exhibits differential binding and activation of target genes

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3799431

A cell-specific nuclear receptor is essential for adrenal and gonadal development and sexual differentiation.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3799431

REST and its downstream molecule Mek5 regulate survival of primordial germ cells.

26 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3799431

Differential gene dosage effects of Ad4BP/SF-1 on target tissue development.

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3799431

Sequence-specific deoxyribonucleic acid (DNA) recognition by steroidogenic factor 1: a helix at the carboxy terminus of the DNA binding domain is necessary for complex stability

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3799431

Steroidogenic factor-1 is essential for compensatory adrenal growth following unilateral adrenalectomy

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3799431

Gonadal determination and adrenal development are regulated by the orphan nuclear receptor steroidogenic factor-1, in a dose-dependent manner.

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3799431

Structural and functional abnormalities in the spleen of an mFtz-F1 gene-disrupted mouse.

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3799431

Steroidogenic Factor 1: A Key Determinant of Endocrine Development and Function

3 September 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FNAR%2FGKT658

High Diagnostic and Prognostic Value of Steroidogenic Factor-1 Expression in Adrenal Tumors

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FNAR%2FGKT658

SF-1 overexpression in childhood adrenocortical tumours

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23907384

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/NAR/GKT658

1 reference

19 August 2017

1 reference

19 August 2017

1 reference

PMCID

3799431