Different promoter affinities account for specificity in MYC-dependent gene regulation. (Q37131368)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27460974%20AND%20SRC:MED&resulttype=core&format=json

19 March 2020

title

Different promoter affinities account for specificity in MYC-dependent gene regulation (English)

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19 March 2020

2

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19 March 2020

Apoorva Baluapuri

3

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19 March 2020

Lisa Anna Jung

5

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19 March 2020

Bjoern Von Eyss

6

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19 March 2020

Caroline Kisker

7

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19 March 2020

Elmar Wolf

10

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19 March 2020

author name string

Francesca Lorenzin

1

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19 March 2020

Susanne Walz

4

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19 March 2020

Jana Wolf

8

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19 March 2020

Martin Eilers

9

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19 March 2020

language of work or name

English

0 references

publication date

27 July 2016

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19 March 2020

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19 March 2020

volume

5

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describes a project that uses

19 March 2020

ImageJ

1 reference

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC4963202/fullTextXML

based on heuristic

inferred from PubMed Central ID database lookup

edgeR

object named as

EdgeR

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

cites work

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Sequence specificity incompletely defines the genome-wide occupancy of Myc.

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Selective transcriptional regulation by Myc in cellular growth control and lymphomagenesis.

14 September 2017

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Activation and repression by oncogenic MYC shape tumour-specific gene expression profiles.

14 September 2017

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Confinement and deformation of single cells and their nuclei inside size-adapted microtubes

14 September 2017

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Genome recognition by MYC.

14 September 2017

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Induction of polyploidy by nuclear fusion mechanism upon decreased expression of the nuclear envelope protein LAP2β in the human osteosarcoma cell line U2OS.

14 September 2017

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An overview of MYC and its interactome

14 September 2017

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The role of MIZ-1 in MYC-dependent tumorigenesis

14 September 2017

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Inhibition of Myc family proteins eradicates KRas-driven lung cancer in mice

14 September 2017

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Genetic instability: tipping the balance

14 September 2017

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c-Myc is a universal amplifier of expressed genes in lymphocytes and embryonic stem cells

14 September 2017

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14 September 2017

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14 September 2017

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14 September 2017

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MYC on the path to cancer

14 September 2017

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miR-34 and SNAIL form a double-negative feedback loop to regulate epithelial-mesenchymal transitions

14 September 2017

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Cell-type independent MYC target genes reveal a primordial signature involved in biomass accumulation

14 September 2017

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Genome-wide mapping of Myc binding and gene regulation in serum-stimulated fibroblasts.

14 September 2017

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The MK5/PRAK kinase and Myc form a negative feedback loop that is disrupted during colorectal tumorigenesis

14 September 2017

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The interaction between Myc and Miz1 is required to antagonize TGFbeta-dependent autocrine signaling during lymphoma formation and maintenance

14 September 2017

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c-Myc regulates transcriptional pause release

14 September 2017

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A signal-noise model for significance analysis of ChIP-seq with negative control

14 September 2017

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14 September 2017

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A clustering approach for identification of enriched domains from histone modification ChIP-Seq data

14 September 2017

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Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists

14 September 2017

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Reflecting on 25 years with MYC.

14 September 2017

1 reference

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Myc-binding-site recognition in the human genome is determined by chromatin context

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4963202

Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4963202

c-Myc binds to human ribosomal DNA and stimulates transcription of rRNA genes by RNA polymerase I

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4963202

Genomic targets of the human c-Myc protein

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4963202

X-ray structures of Myc-Max and Mad-Max recognizing DNA. Molecular bases of regulation by proto-oncogenic transcription factors

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4963202

The novel ATM-related protein TRRAP is an essential cofactor for the c-Myc and E2F oncoproteins

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4963202

An alternative pathway for gene regulation by Myc

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4963202

Binding of myc proteins to canonical and noncanonical DNA sequences

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4963202

TATA-binding protein and the retinoblastoma gene product bind to overlapping epitopes on c-Myc and adenovirus E1A protein

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4963202

Myc-induced proliferation and transformation require Akt-mediated phosphorylation of FoxO proteins

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4963202

Identifying ChIP-seq enrichment using MACS.

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4963202

Myc recruits P-TEFb to mediate the final step in the transcriptional activation of the cad promoter

27 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4963202

Ubiquitin-Dependent Turnover of MYC Antagonizes MYC/PAF1C Complex Accumulation to Drive Transcriptional Elongation.

27 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4963202

More, more, more: downregulation of a MK5-FoxO3a-mir34b/c pathway further increases c-Myc levels in colorectal cancer

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4963202

3 September 2018

Identifiers

DOI

10.7554/ELIFE.15161

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27460974%20AND%20SRC:MED&resulttype=core&format=json

19 March 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27460974%20AND%20SRC:MED&resulttype=core&format=json

19 March 2020

1 reference