In vivo dynamics of RNA polymerase II transcription. (Q37088096)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17676063%20AND%20SRC:MED&resulttype=core&format=json

3 January 2020

title

In vivo dynamics of RNA polymerase II transcription (English)

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3 January 2020

1

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3 January 2020

Valeria de Turris

3

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3 January 2020

Shailesh M Shenoy

5

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3 January 2020

7

Robert H Singer

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3 January 2020

author name string

Yaron Shav-Tal

2

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3 January 2020

Yehuda Brody

4

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3 January 2020

Robert D Phair

6

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3 January 2020

publication date

5 August 2007

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Nature Structural & Molecular Biology

3 January 2020

published in

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3 January 2020

volume

14

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3 January 2020

issue

9

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3 January 2020

page(s)

796-806

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https://scigraph.springernature.com/pub.10.1038/nsmb1280

3 January 2020

exact match

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cites work

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Initial transcription by RNA polymerase proceeds through a DNA-scrunching mechanism

29 September 2017

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The regulatory roles and mechanism of transcriptional pausing

29 September 2017

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Breaking barriers to transcription elongation

29 September 2017

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Controlling the elongation phase of transcription with P-TEFb

29 September 2017

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Transcriptional pulsing of a developmental gene

29 September 2017

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29 September 2017

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Stepwise RNP assembly at the site of H/ACA RNA transcription in human cells

29 September 2017

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Direct observation of abortive initiation and promoter escape within single immobilized transcription complexes.

29 September 2017

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29 September 2017

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Dynamics of transcription and mRNA export

29 September 2017

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Rules of engagement: co-transcriptional recruitment of pre-mRNA processing factors

29 September 2017

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Distinction and relationship between elongation rate and processivity of RNA polymerase II in vivo

29 September 2017

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Structural basis of eukaryotic gene transcription

29 September 2017

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A ribonucleolytic rat torpedoes RNA polymerase II.

29 September 2017

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Imaging gene expression in single living cells.

29 September 2017

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Dynamics of single mRNPs in nuclei of living cells.

29 September 2017

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RNA polymerase II structure: from core to functional complexes

29 September 2017

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From silencing to gene expression: real-time analysis in single cells

29 September 2017

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Investigating RNA polymerase II carboxyl-terminal domain (CTD) phosphorylation.

29 September 2017

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The RNA polymerase II elongation complex

29 September 2017

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RNA polymerase II accumulation in the promoter-proximal region of the dihydrofolate reductase and gamma-actin genes

29 September 2017

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Single mRNA molecules demonstrate probabilistic movement in living mammalian cells

29 September 2017

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The transcription cycle of RNA polymerase II in living cells.

29 September 2017

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A kinetic framework for a mammalian RNA polymerase in vivo

29 September 2017

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Dynamic behavior of transcription factors on a natural promoter in living cells

29 September 2017

1 reference

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Single molecule analysis of RNA polymerase elongation reveals uniform kinetic behavior

29 September 2017

1 reference

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Promoter escape by RNA polymerase II

29 September 2017

1 reference

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Kinetic modelling approaches to in vivo imaging

29 September 2017

1 reference

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Transcriptional consequences of topoisomerase inhibition

29 September 2017

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Structural basis of transcription: RNA polymerase II at 2.8 angstrom resolution

29 September 2017

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Mechanism of action of camptothecin

29 September 2017

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High mobility of proteins in the mammalian cell nucleus

29 September 2017

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Transcription-independent phosphorylation of the RNA polymerase II C-terminal domain (CTD) involves ERK kinases (MEK1/2).

29 September 2017

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Localization of ASH1 mRNA particles in living yeast

29 September 2017

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Numbers and organization of RNA polymerases, nascent transcripts, and transcription units in HeLa nuclei.

29 September 2017

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Visualization of single RNA transcripts in situ

29 September 2017

1 reference

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Three transitions in the RNA polymerase II transcription complex during initiation

29 September 2017

1 reference

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In vivo localization of DNA sequences and visualization of large-scale chromatin organization using lac operator/repressor recognition

29 September 2017

1 reference

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In vivo degradation of RNA polymerase II largest subunit triggered by alpha-amanitin

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4942130

Rapid changes in Drosophila transcription after an instantaneous heat shock

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4942130

The human dystrophin gene requires 16 hours to be transcribed and is cotranscriptionally spliced

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4942130

Transcription-dependent redistribution of the large subunit of RNA polymerase II to discrete nuclear domains

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4942130

Efficient and selective initiation by yeast RNA polymerase B in a dinucleotide-primed reaction

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4942130

Visualization of RNA Synthesis on Chromosomes

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4942130

Transcriptional arrest within the first exon is a fast control mechanism in c-myc gene expression

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4942130

Anti-termination of transcription within the long terminal repeat of HIV-1 by tat gene product

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4942130

Promoter-proximal pausing of RNA polymerase II defines a general rate-limiting step after transcription initiation

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4942130

Single-molecule study of transcriptional pausing and arrest by E. coli RNA polymerase

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4942130

Interplay between positive and negative elongation factors: drawing a new view of DRB.

27 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4942130

The RNA polymerase II molecule at the 5' end of the uninduced hsp70 gene of D. melanogaster is transcriptionally engaged.

27 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4942130

Dynamics of heat shock factor association with native gene loci in living cells

27 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4942130

Dissecting the contribution of diffusion and interactions to the mobility of nuclear proteins

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4942130

Different populations of RNA polymerase II in living mammalian cells.

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4942130

Cooperation between RNA polymerase molecules in transcription elongation

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4942130

Sensitive and high-resolution detection of RNA in situ.

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4942130

A new look at the statistical model identification

3 September 2018

1 reference

Visualization of single molecules of mRNA in situ

21 January 2018

1 reference

Cotranscriptional coupling of splicing factor recruitment and precursor messenger RNA splicing in mammalian cells

31 March 2020

1 reference

Estimating the Dimension of a Model

31 March 2020

1 reference

31 March 2020

Identifiers

DOI

10.1038/NSMB1280

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17676063%20AND%20SRC:MED&resulttype=core&format=json

3 January 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17676063%20AND%20SRC:MED&resulttype=core&format=json

3 January 2020

1 reference