SGAtools: one-stop analysis and visualization of array-based genetic interaction screens (Q36954072)

17 August 2017

SGAtools: one-stop analysis and visualization of array-based genetic interaction screens (English)

1 reference

17 August 2017

1 reference

Matej Usaj

2

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Omar Wagih

object named as

Omar Wagih

1

0 references

Leopold Parts

object named as

Leopold Parts

10

0 references

author name string

Anastasia Baryshnikova

3

1 reference

17 August 2017

Benjamin VanderSluis

4

1 reference

17 August 2017

Elena Kuzmin

5

1 reference

17 August 2017

Michael Costanzo

6

1 reference

17 August 2017

Chad L Myers

7

1 reference

17 August 2017

Brenda J Andrews

8

1 reference

17 August 2017

Charles M Boone

9

1 reference

17 August 2017

language of work or name

English

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publication date

15 May 2013

1 reference

17 August 2017

Nucleic Acids Research

1 reference

17 August 2017

41

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17 August 2017

W591-6

1 reference

17 August 2017

Web Server issue

1 reference

Creative Commons Attribution 3.0 Unported

17 August 2017

start time

4 October 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

Differential analysis of high-throughput quantitative genetic interaction data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3692131

Functional analysis with a barcoder yeast gene overexpression system

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3692131

Distinct growth strategies of soil bacteria as revealed by large-scale colony tracking

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3692131

D³: Data-Driven Documents

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3692131

g:Profiler--a web server for functional interpretation of gene lists (2011 update).

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3692131

Quantitative analysis of fitness and genetic interactions in yeast on a genome scale

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3692131

ScreenMill: a freely available software suite for growth measurement, analysis and visualization of high-throughput screen data

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3692131

Colonyzer: automated quantification of micro-organism growth characteristics on solid agar

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3692131

Analysis of a genome-wide set of gene deletions in the fission yeast Schizosaccharomyces pombe.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3692131

The genetic landscape of a cell

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3692131

eSGA: E. coli synthetic genetic array analysis

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3692131

Toward a comprehensive temperature-sensitive mutant repository of the essential genes of Saccharomyces cerevisiae

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3692131

Defining genetic interaction

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3692131

Accurate, precise modeling of cell proliferation kinetics from time-lapse imaging and automated image analysis of agar yeast culture arrays

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3692131

Colony size measurement of the yeast gene deletion strains for functional genomics

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3692131

CellProfiler: free, versatile software for automated biological image analysis

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3692131

A strategy for extracting and analyzing large-scale quantitative epistatic interaction data

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3692131

Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3692131

Mapping pathways and phenotypes by systematic gene overexpression

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3692131

High-resolution genetic mapping with ordered arrays of Saccharomyces cerevisiae deletion mutants.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3692131

Functional profiling of the Saccharomyces cerevisiae genome

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3692131

Systematic exploration of essential yeast gene function with temperature-sensitive mutants

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3692131

SGAM: an array-based approach for high-resolution genetic mapping in Saccharomyces cerevisiae.

27 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3692131

Synthetic genetic array analysis in Saccharomyces cerevisiae.

4 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3692131

Exploring the Mode-of-Action of Bioactive Compounds by Chemical-Genetic Profiling in Yeast

4 September 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FNAR%2FGKT400

Array-based synthetic genetic screens to map bacterial pathways and functional networks in Escherichia coli

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23677617

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/NAR/GKT400

1 reference

journals/nar/WagihUBVKCMABP13

17 August 2017

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

17 August 2017

1 reference