Contributions of Charged Residues in Structurally Dynamic Capsid Surface Loops to Rous Sarcoma Virus Assembly (Q36950909)

3

1 reference

17 August 2017

Tam-Linh N Nguyen

4

1 reference

17 August 2017

Matthew R England

5

1 reference

17 August 2017

Maria C Bewley

6

1 reference

17 August 2017

Rebecca C Craven

describes a project that uses

8

1 reference

17 August 2017

language of work or name

English

0 references

publication date

6 April 2016

1 reference

17 August 2017

1 reference

17 August 2017

90

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17 August 2017

5700-5714

1 reference

17 August 2017

12

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17 August 2017

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11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC4886791/fullTextXML

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inferred from PubMed Central ID database lookup

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The Structure of Immature Virus-Like Rous Sarcoma Virus Gag Particles Reveals a Structural Role for the p10 Domain in Assembly.

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Atomic Modeling of an Immature Retroviral Lattice Using Molecular Dynamics and Mutagenesis

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Structure of the immature HIV-1 capsid in intact virus particles at 8.8 Å resolution

9 September 2017

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Mature HIV-1 capsid structure by cryo-electron microscopy and all-atom molecular dynamics

9 September 2017

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The ability of TNPO3-depleted cells to inhibit HIV-1 infection requires CPSF6.

9 September 2017

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TNPO3 protects HIV-1 replication from CPSF6-mediated capsid stabilization in the host cell cytoplasm.

9 September 2017

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NetworkView: 3D display and analysis of protein·RNA interaction networks

9 September 2017

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CPSF6 Defines a Conserved Capsid Interface that Modulates HIV-1 Replication

9 September 2017

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Protease cleavage leads to formation of mature trimer interface in HIV-1 capsid

9 September 2017

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Structure of the immature retroviral capsid at 8 Å resolution by cryo-electron microscopy

9 September 2017

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Human immunodeficiency virus type 1 capsid mutation N74D alters cyclophilin A dependence and impairs macrophage infection

9 September 2017

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HIV-1 capsid-targeting domain of cleavage and polyadenylation specificity factor 6

9 September 2017

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HIV-1 capsid-cyclophilin interactions determine nuclear import pathway, integration targeting and replication efficiency

9 September 2017

1 reference

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Structure of a Monomeric Mutant of the HIV-1 Capsid Protein

9 September 2017

1 reference

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Novel Escape Mutants Suggest an Extensive TRIM5α Binding Site Spanning the Entire Outer Surface of the Murine Leukemia Virus Capsid Protein

9 September 2017

1 reference

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Atomic-level modelling of the HIV capsid

9 September 2017

1 reference

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Homology-based identification of capsid determinants that protect HIV1 from human TRIM5α restriction

9 September 2017

1 reference

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Suppression of a morphogenic mutant in Rous sarcoma virus capsid protein by a second-site mutation: a cryoelectron tomography study

9 September 2017

1 reference

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Flexible use of nuclear import pathways by HIV-1.

9 September 2017

1 reference

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The capsid protein of human immunodeficiency virus: interactions of HIV-1 capsid with host protein factors

9 September 2017

1 reference

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Structure and assembly of immature HIV

9 September 2017

1 reference

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NMR structure of the N-terminal domain of capsid protein from the mason-pfizer monkey virus

9 September 2017

1 reference

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X-ray structures of the hexameric building block of the HIV capsid

9 September 2017

1 reference

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Dynamical networks in tRNA:protein complexes

9 September 2017

1 reference

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Visualization of a missing link in retrovirus capsid assembly

9 September 2017

1 reference

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Structure of the capsid amino-terminal domain from the betaretrovirus, Jaagsiekte sheep retrovirus

9 September 2017

1 reference

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Host restriction factors blocking retroviral replication

9 September 2017

1 reference

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Cooperative role of the MHR and the CA dimerization helix in the maturation of the functional retrovirus capsid

9 September 2017

1 reference

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Critical role of conserved hydrophobic residues within the major homology region in mature retroviral capsid assembly.

9 September 2017

1 reference

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Structure of B-MLV capsid amino-terminal domain reveals key features of viral tropism, gag assembly and core formation

9 September 2017

1 reference

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Maturation inhibitors: a new therapeutic class targets the virus structure

9 September 2017

1 reference

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Structure of full-length HIV-1 CA: a model for the mature capsid lattice

9 September 2017

1 reference

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Structure of the Antiviral Assembly Inhibitor CAP-1 Complex with the HIV-1 CA Protein

9 September 2017

1 reference

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PDB2PQR: expanding and upgrading automated preparation of biomolecular structures for molecular simulations

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4886791

Electron cryotomography of immature HIV-1 virions reveals the structure of the CA and SP1 Gag shells

9 September 2017

1 reference

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The human TRIM5alpha restriction factor mediates accelerated uncoating of the N-tropic murine leukemia virus capsid

9 September 2017

1 reference

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Genetic Studies of the beta-hairpin loop of Rous sarcoma virus capsid protein.

9 September 2017

1 reference

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In vitro resistance to the human immunodeficiency virus type 1 maturation inhibitor PA-457 (Bevirimat).

9 September 2017

1 reference

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Scalable molecular dynamics with NAMD

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4886791

Virus particle core defects caused by mutations in the human immunodeficiency virus capsid N-terminal domain

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4886791

Retroviral capsid determinants of Fv1 NB and NR tropism.

9 September 2017

1 reference

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Binding and susceptibility to postentry restriction factors in monkey cells are specified by distinct regions of the human immunodeficiency virus type 1 capsid

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4886791

Capsid-dependent and -independent postentry restriction of primate lentivirus tropism in rodent cells

9 September 2017

1 reference

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Small-molecule inhibition of human immunodeficiency virus type 1 replication by specific targeting of the final step of virion maturation

9 September 2017

1 reference

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Nucleic acid binding-induced Gag dimerization in the assembly of Rous sarcoma virus particles in vitro

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4886791

Dimeric rous sarcoma virus capsid protein structure relevant to immature Gag assembly

9 September 2017

1 reference

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Human Immunodeficiency Virus Type 1 N-Terminal Capsid Mutants Containing Cores with Abnormally High Levels of Capsid Protein and Virtually No Reverse Transcriptase

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4886791

PA-457: A potent HIV inhibitor that disrupts core condensation by targeting a late step in Gag processing

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4886791

Functional characterization of a portion of the Moloney murine leukemia virus gag gene by genetic footprinting

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4886791

Link between genome packaging and rate of budding for Rous sarcoma virus

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4886791

Structure of the N-terminal 283-residue fragment of the immature HIV-1 Gag polyprotein

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4886791

Rous sarcoma virus Gag protein-oligonucleotide interaction suggests a critical role for protein dimer formation in assembly

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4886791

Human immunodeficiency virus type 1 N-terminal capsid mutants that exhibit aberrant core morphology and are blocked in initiation of reverse transcription in infected cells

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4886791

Second-site suppressors of Rous sarcoma virus Ca mutations: evidence for interdomain interactions

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4886791

Anti-human immunodeficiency virus activity of YK-FH312 (a betulinic acid derivative), a novel compound blocking viral maturation

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4886791

Structural analysis of the N-terminal domain of the human T-cell leukemia virus capsid protein

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4886791

Viral DNA synthesis defects in assembly-competent Rous sarcoma virus CA mutants.

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4886791

Efficient particle production by minimal Gag constructs which retain the carboxy-terminal domain of human immunodeficiency virus type 1 capsid-p2 and a late assembly domain

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4886791

Solution structure and dynamics of the Rous sarcoma virus capsid protein and comparison with capsid proteins of other retroviruses

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4886791

Identification of retroviral late domains as determinants of particle size.

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4886791

Model for lentivirus capsid core assembly based on crystal dimers of EIAV p26

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4886791

Particle size determinants in the human immunodeficiency virus type 1 Gag protein

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4886791

Genetic determinants of Rous sarcoma virus particle size.

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4886791

Crystal structure of human cyclophilin A bound to the amino-terminal domain of HIV-1 capsid

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4886791

VMD: visual molecular dynamics

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4886791

Necessity of the spacer peptide between CA and NC in the Rous sarcoma virus gag protein

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4886791

Role of the major homology region of human immunodeficiency virus type 1 in virion morphogenesis.

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4886791

Genetic analysis of the major homology region of the Rous sarcoma virus Gag protein

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4886791

Mutational analysis of the major homology region of Mason-Pfizer monkey virus by use of saturation mutagenesis

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4886791

Lethal mutations in the major homology region and their suppressors act by modulating the dimerization of the rous sarcoma virus capsid protein C-terminal domain

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4886791

Conserved and variable features of Gag structure and arrangement in immature retrovirus particles

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4886791

Mutations in the spacer peptide and adjoining sequences in Rous sarcoma virus Gag lead to tubular budding

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4886791

Mutational analysis of the N-terminal domain of Moloney murine leukemia virus capsid protein

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4886791

Saturation of TRIM5 alpha-mediated restriction of HIV-1 infection depends on the stability of the incoming viral capsid

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4886791

High-resolution structure of a retroviral capsid hexameric amino-terminal domain

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4886791

Assembly properties of the human immunodeficiency virus type 1 CA protein

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4886791

Functional Surfaces of the Human Immunodeficiency Virus Type 1 Capsid Protein

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4886791

Characterization of a small (25-kilodalton) derivative of the Rous sarcoma virus Gag protein competent for particle release

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4886791

A carboxy-terminally truncated human CPSF6 lacking residues encoded by exon 6 inhibits HIV-1 cDNA synthesis and promotes capsid disassembly

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4886791

Cryo-electron microscopy reveals conserved and divergent features of gag packing in immature particles of Rous sarcoma virus and human immunodeficiency virus.

27 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4886791

In vivo functions of CPSF6 for HIV-1 as revealed by HIV-1 capsid evolution in HLA-B27-positive subjects

27 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4886791

Determinants of activity of the HIV-1 maturation inhibitor PA-457.

4 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4886791

A statistical method for comparing viral growth curves.

4 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4886791

Assembly and analysis of conical models for the HIV-1 core.

4 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4886791

Software news and updates. Carma: a molecular dynamics analysis program

4 September 2018

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