Top-down systems biology integration of conditional prebiotic modulated transgenomic interactions in a humanized microbiome mouse model (Q36837773)

16 August 2017

Top-down systems biology integration of conditional prebiotic modulated transgenomic interactions in a humanized microbiome mouse model (English)

1 reference

16 August 2017

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Francois-Pierre J Martin

Francois-Pierre J Martin

1

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Jeremy K. Nicholson

Jeremy K Nicholson

15

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Yulan Wang

Yulan Wang

2

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Elaine Holmes

Elaine Holmes

14

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John C Lindon

John C Lindon

13

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Ivan Kok Seng Yap

4

Ivan K S Yap

1 reference

16 August 2017

3

Norbert Sprenger

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16 August 2017

11

Laurent B Fay

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16 August 2017

12

Sunil Kochhar

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16 August 2017

10

Peter van Bladeren

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16 August 2017

5

Serge Rezzi

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16 August 2017

6

Ziad Ramadan

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16 August 2017

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Florence Rochat

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16 August 2017

9

Christine Cherbut

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16 August 2017

Emma Peré-Trepat

7

1 reference

16 August 2017

15 July 2008

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Molecular Systems Biology

16 August 2017

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16 August 2017

4

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16 August 2017

205

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Bacterial metabolism and health-related effects of galacto-oligosaccharides and other prebiotics

16 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516362

Probiotic modulation of symbiotic gut microbial-host metabolic interactions in a humanized microbiome mouse model

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516362

An ecological and evolutionary perspective on human-microbe mutualism and disease

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516362

The human microbiome project

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516362

Metabolic fingerprinting as a diagnostic tool.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516362

Probiotics and prebiotics in infant nutrition

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516362

A top-down systems biology view of microbiome-mammalian metabolic interactions in a mouse model

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516362

Effects of probiotic Lactobacillus paracasei treatment on the host gut tissue metabolic profiles probed via magic-angle-spinning NMR spectroscopy

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516362

Metabolic diversity of the intestinal microbiota: implications for health and disease

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516362

An obesity-associated gut microbiome with increased capacity for energy harvest

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516362

Microbial ecology: human gut microbes associated with obesity

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516362

Metabolomics of a superorganism

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516362

The role of microbes in Crohn's disease

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516362

Genomic and metabolic studies of the impact of probiotics on a model gut symbiont and host

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516362

Metabolomics as a functional genomic tool for understanding lipid dysfunction in diabetes, obesity and related disorders

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516362

Review article: prebiotics in the gastrointestinal tract

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516362

Metabolic profiling reveals a contribution of gut microbiota to fatty liver phenotype in insulin-resistant mice

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516362

Recent advances on structure, metabolism, and function of human milk oligosaccharides

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516362

Metagenomic analysis of the human distal gut microbiome

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516362

Endocrine functions of bile acids

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516362

Molecular analysis of the bacterial microbiota in the human stomach

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516362

Bile acids induce energy expenditure by promoting intracellular thyroid hormone activation

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516362

Modulation of the microbial ecology of the human colon by probiotics, prebiotics and synbiotics to enhance human health: an overview of enabling science and potential applications

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516362

Dietary fibres as "prebiotics": implications for colorectal cancer

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516362

Gut microorganisms, mammalian metabolism and personalized health care

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516362

Host-bacterial mutualism in the human intestine

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516362

Statistical total correlation spectroscopy: an exploratory approach for latent biomarker identification from metabolic 1H NMR data sets

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516362

The gut microbiota as an environmental factor that regulates fat storage

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516362

A special fondness for lactobacilli

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516362

Therapeutic manipulation of the enteric microflora in inflammatory bowel diseases: antibiotics, probiotics, and prebiotics

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516362

A Genomic View of the Human-Bacteroides thetaiotaomicron Symbiosis

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516362

The genome sequence of Bifidobacterium longum reflects its adaptation to the human gastrointestinal tract

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516362

Effects of consumption of probiotics and prebiotics on serum lipid levels in humans

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516362

A comparative in vitro evaluation of the fermentation properties of prebiotic oligosaccharides

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516362

Effects of fructans-type prebiotics on lipid metabolism

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516362

Probiotics, prebiotics, and synbiotics--approaching a definition

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516362

Oligosaccharides in human milk: structural, functional, and metabolic aspects

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516362

Contribution of microbial amino acids to amino acid homeostasis of the host.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516362

Probiotics, prebiotics, and synbiotics: approaches for modulating the microbial ecology of the gut.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516362

Developmental microbial ecology of the neonatal gastrointestinal tract

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516362

Prebiotics and synbiotics: concepts and nutritional properties

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516362

Fatty acids and eicosanoids regulate gene expression through direct interactions with peroxisome proliferator-activated receptors alpha and gamma

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516362

The metabolic role of GIP: physiology and pathology

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516362

Dietary modulation of the human colonic microbiota: introducing the concept of prebiotics

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516362

Kinetics and metabolism of Bifidobacterium adolescentis MB 239 growing on glucose, galactose, lactose, and galactooligosaccharides

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516362

Mechanisms by which carbohydrates regulate expression of genes for glycolytic and lipogenic enzymes.

27 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516362

Useful characteristics and commercial applications of fructo-oligosaccharides

27 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516362

Evaluation of the orthogonal projection on latent structure model limitations caused by chemical shift variability and improved visualization of biomarker changes in 1H NMR spectroscopic metabonomic studies.

27 June 2018

1 reference

https://api.crossref.org/works/10.1038%2FMSB.2008.40

Changes in plasma and urinary taurine and amino acids in runners immediately and 24h after a marathon.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FMSB.2008.40

Degradation and fermentation of alpha-gluco-oligosaccharides by bacterial strains from human colon: in vitro and in vivo studies in gnotobiotic rats.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FMSB.2008.40

Role of gastrointestinal factors in hunger and satiety in man

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FMSB.2008.40

Transgenomic metabolic interactions in a mouse disease model: interactions of Trichinella spiralis infection with dietary Lactobacillus paracasei supplementation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FMSB.2008.40

Human metabolic phenotypes link directly to specific dietary preferences in healthy individuals

21 January 2018

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https://api.crossref.org/works/10.1038%2FMSB.2008.40

A metabonomic strategy for the detection of the metabolic effects of chamomile (Matricaria recutita L.) ingestion

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FMSB.2008.40

A novel galactooligosaccharide mixture increases the bifidobacterial population numbers in a continuous in vitro fermentation system and in the proximal colonic contents of pigs in vivo.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516362

Formation of methylamines from ingested choline and lecithin.

5 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516362

High-resolution magic angle spinning (1)H NMR spectroscopy of intact liver and kidney: optimization of sample preparation procedures and biochemical stability of tissue during spectral acquisition

5 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516362

Variation in Gut Microbiota Strongly Influences Individual Rodent Phenotypes

20 October 2018

1 reference

https://api.crossref.org/works/10.1038%2FMSB.2008.40

Susceptibility of Human Metabolic Phenotypes to Dietary Modulation

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FMSB.2008.40

Metabonomic Investigations of Aging and Caloric Restriction in a Life-Long Dog Study

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FMSB.2008.40

21 January 2018

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12 December 2020

Commentary: Remembrance of microbes past

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12 December 2020

The effect of dietary guar gum on the activities of some key enzymes of carbohydrate and lipid metabolism in mouse liver

1 reference

12 December 2020

Effect of fructo-oligosaccharides on intestinal microflora

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12 December 2020

Effects of nutrients and hormones on transcriptional and post-transcriptional regulation of fatty acid synthase in rat liver

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12 December 2020

The effects of transgalactosylated oligosaccharides on gut flora metabolism in rats associated with a human faecal microflora

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Metabolism and excretion of methylamines in rats

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12 December 2020

Influence of galactooligosaccharides on the human fecal microflora

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12 December 2020

Gut flora and the origin of some urinary aromatic phenolic compounds

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Dietary oligofructose lowers triglycerides, phospholipids and cholesterol in serum and very low density lipoproteins of rats

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12 December 2020

Enumeration of human colonic bacteria producing phenolic and indolic compounds: effects of pH, carbohydrate availability and retention time on dissimilatory aromatic amino acid metabolism

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Involvement of lipogenesis in the lower VLDL secretion induced by oligofructose in rats

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Compared effects of three oligosaccharides on metabolism of intestinal microflora in rats inoculated with a human faecal flora

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12 December 2020

Effects of Tamm-Horsfall protein with normal and reduced sialic acid content upon the crystallization of calcium phosphate and calcium oxalate in human urine

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12 December 2020

Oligofructose modulates lipid metabolism alterations induced by a fat-rich diet in rats

1 reference

12 December 2020

Effect of non-digestible fermentable carbohydrates on hepatic fatty acid metabolism

1 reference

12 December 2020

Proceedings of the International Symposium on Probiotics and Prebiotics. Kiel, Germany, June 11-12, 1998

1 reference

https://api.crossref.org/works/10.1038%2FMSB.2008.40

7 January 2021

inferred from DOI database lookup

Identifiers

DOI

10.1038/MSB.2008.40

1 reference

16 August 2017

1 reference

16 August 2017

1 reference

PMCID

2516362