Mechanisms and control of mRNA turnover in Saccharomyces cerevisiae. (Q36670947)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8852902%20AND%20SRC:MED&resulttype=core&format=json

20 October 2019

title

Mechanisms and control of mRNA turnover in Saccharomyces cerevisiae (English)

1 reference

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20 October 2019

main subject

Saccharomyces cerevisiae

object named as

Saccharomyces cerevisiae

1 reference

Caponigro G

1

1 reference

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20 October 2019

Parker R

series ordinal

2

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20 October 2019

publication date

1 March 1996

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20 October 2019

language of work or name

1 reference

Microbiological Reviews

1 reference

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20 October 2019

volume

60

1 reference

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20 October 2019

issue

1

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20 October 2019

page(s)

233-249

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publication type of scholarly work

20 October 2019

review article

1 reference

Glucose-dependent turnover of the mRNAs encoding succinate dehydrogenase peptides in Saccharomyces cerevisiae: sequence elements in the 5' untranslated region of the Ip mRNA play a dominant role

cites work

1 reference

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An essential yeast gene with homology to the exonuclease-encoding XRN1/KEM1 gene also encodes a protein with exoribonuclease activity

30 September 2017

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A turnover pathway for both stable and unstable mRNAs in yeast: evidence for a requirement for deadenylation

30 September 2017

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A small segment of the MAT alpha 1 transcript promotes mRNA decay in Saccharomyces cerevisiae: a stimulatory role for rare codons

30 September 2017

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Stabilization and ribosome association of unspliced pre-mRNAs in a yeast upf1- mutant

30 September 2017

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Yeast cells lacking 5'-->3' exoribonuclease 1 contain mRNA species that are poly(A) deficient and partially lack the 5' cap structure

30 September 2017

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The yeast UME5 gene regulates the stability of meiotic mRNAs in response to glucose

30 September 2017

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His-154 is involved in the linkage of the Saccharomyces cerevisiae L-A double-stranded RNA virus Gag protein to the cap structure of mRNAs and is essential for M1 satellite virus expression

30 September 2017

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Premature translational termination triggers mRNA decapping

30 September 2017

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A polyadenylation factor subunit is the human homologue of the Drosophila suppressor of forked protein

30 September 2017

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Mammalian nonsense codons can be cis effectors of nuclear mRNA half-life.

30 September 2017

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AUUUA is not sufficient to promote poly(A) shortening and degradation of an mRNA: the functional sequence within AU-rich elements may be UUAUUUA(U/A)(U/A).

30 September 2017

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Deadenylation of the unstable mRNA encoded by the yeast MFA2 gene leads to decapping followed by 5'-->3' digestion of the transcript

30 September 2017

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Evidence that the pathway of transferrin receptor mRNA degradation involves an endonucleolytic cleavage within the 3' UTR and does not involve poly(A) tail shortening.

30 September 2017

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Identification and characterization of a sequence motif involved in nonsense-mediated mRNA decay

30 September 2017

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The nonamer UUAUUUAUU is the key AU-rich sequence motif that mediates mRNA degradation

30 September 2017

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Turnover mechanisms of the stable yeast PGK1 mRNA

30 September 2017

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Identification of a novel component of the nonsense-mediated mRNA decay pathway by use of an interacting protein screen

30 September 2017

1 reference

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Characterization of cis-acting sequences and decay intermediates involved in nonsense-mediated mRNA turnover

30 September 2017

1 reference

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Decoying the cap- mRNA degradation system by a double-stranded RNA virus and poly(A)- mRNA surveillance by a yeast antiviral system

30 September 2017

1 reference

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Regulation and intracellular localization of Saccharomyces cerevisiae strand exchange protein 1 (Sep1/Xrn1/Kem1), a multifunctional exonuclease

30 September 2017

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Synthetic lethality of sep1 (xrn1) ski2 and sep1 (xrn1) ski3 mutants of Saccharomyces cerevisiae is independent of killer virus and suggests a general role for these genes in translation control

30 September 2017

1 reference

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Translational regulation in development.

30 September 2017

1 reference

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Identification of the cis-elements mediating the autogenous control of ribosomal protein L2 mRNA stability in yeast

30 September 2017

1 reference

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mRNA stability in mammalian cells

30 September 2017

1 reference

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The majority of yeast UPF1 co-localizes with polyribosomes in the cytoplasm

30 September 2017

1 reference

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The 5' end of yeast 5.8S rRNA is generated by exonucleases from an upstream cleavage site

30 September 2017

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Identification of an additional gene required for eukaryotic nonsense mRNA turnover

30 September 2017

1 reference

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In vivo transcription of a eukaryotic regulatory gene

30 September 2017

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Messenger RNA stability in Saccharomyces cerevisiae: the influence of translation and poly(A) tail length

30 September 2017

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The relationship between mRNA stability and length in Saccharomyces cerevisiae

30 September 2017

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A single gene from yeast for both nuclear and cytoplasmic polyadenylate-binding proteins: domain structure and expression

30 September 2017

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A conserved AU sequence from the 3' untranslated region of GM-CSF mRNA mediates selective mRNA degradation

30 September 2017

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Poly(A) shortening and degradation of the 3' A+U-rich sequences of human c-myc mRNA in a cell-free system

30 September 2017

1 reference

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Rapid cytoplasmic turnover of c-myc mRNA: requirement of the 3' untranslated sequences

30 September 2017

1 reference

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A single domain of yeast poly(A)-binding protein is necessary and sufficient for RNA binding and cell viability

30 September 2017

1 reference

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Eucaryotic RNA polymerase conditional mutant that rapidly ceases mRNA synthesis

30 September 2017

1 reference

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Determinants that contribute to cytoplasmic stability of human c-fos and beta-globin mRNAs are located at several sites in each mRNA.

30 September 2017

1 reference

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Mild temperature shock affects transcription of yeast ribosomal protein genes as well as the stability of their mRNAs

30 September 2017

1 reference

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mRNA-decapping enzyme from Saccharomyces cerevisiae: purification and unique specificity for long RNA chains

30 September 2017

1 reference

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Premature translation termination mediates triosephosphate isomerase mRNA degradation

30 September 2017

1 reference

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A model fungal gene regulatory mechanism: the GAL genes of Saccharomyces cerevisiae.

30 September 2017

1 reference

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Codon replacement in the PGK1 gene of Saccharomyces cerevisiae: experimental approach to study the role of biased codon usage in gene expression

30 September 2017

1 reference

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Autoregulatory control of beta-tubulin mRNA stability is linked to translation elongation

30 September 2017

1 reference

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The role of mRNA and protein stability in gene expression

30 September 2017

1 reference

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The poly(A) binding protein is required for poly(A) shortening and 60S ribosomal subunit-dependent translation initiation

30 September 2017

1 reference

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c-myc RNA degradation in growing and differentiating cells: possible alternate pathways

30 September 2017

1 reference

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Monovalent cation-induced structure of telomeric DNA: the G-quartet model

30 September 2017

1 reference

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Processing of 9E3 mRNA and regulation of its stability in normal and Rous sarcoma virus-transformed cells

30 September 2017

1 reference

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A novel genetic system to detect protein-protein interactions

30 September 2017

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A transcriptional activator is located in the coding region of the yeast PGK gene

30 September 2017

1 reference

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Polynucleotide phosphorylase and ribonuclease II are required for cell viability and mRNA turnover in Escherichia coli K-12.

30 September 2017

1 reference

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Isolation of a temperature-sensitive mutant with an altered tRNA nucleotidyltransferase and cloning of the gene encoding tRNA nucleotidyltransferase in the yeast Saccharomyces cerevisiae.

30 September 2017

1 reference

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Coding and noncoding sequences at the 3' end of yeast histone H2B mRNA confer cell cycle regulation

30 September 2017

1 reference

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Identification and comparison of stable and unstable mRNAs in Saccharomyces cerevisiae

30 September 2017

1 reference

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Translation and a 42-nucleotide segment within the coding region of the mRNA encoded by the MAT alpha 1 gene are involved in promoting rapid mRNA decay in yeast

30 September 2017

1 reference

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Effect of leader primary structure on the translational efficiency of phosphoglycerate kinase mRNA in yeast

30 September 2017

1 reference

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The ribosomal protein L2 in S. cerevisiae controls the level of accumulation of its own mRNA

30 September 2017

1 reference

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Disruption of the gene XRN1, coding for a 5'----3' exoribonuclease, restricts yeast cell growth

30 September 2017

1 reference

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Do the poly(A) tail and 3' untranslated region control mRNA translation?

30 September 2017

1 reference

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mRNA poly(A) tail, a 3' enhancer of translational initiation

30 September 2017

1 reference

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The yeast heat shock response is induced by conversion of cells to spheroplasts and by potent transcriptional inhibitors

30 September 2017

1 reference

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A single base deletion in the Tfm androgen receptor gene creates a short-lived messenger RNA that directs internal translation initiation

30 September 2017

1 reference

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Yeast glycolytic mRNAs are differentially regulated

30 September 2017

1 reference

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An A + U-rich element RNA-binding factor regulates c-myc mRNA stability in vitro

30 September 2017

1 reference

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Nonsense codons within the Rous sarcoma virus gag gene decrease the stability of unspliced viral RNA

30 September 2017

1 reference

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The product of the yeast UPF1 gene is required for rapid turnover of mRNAs containing a premature translational termination codon

30 September 2017

1 reference

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Poly(A) tail shortening is the translation-dependent step in c-myc mRNA degradation

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=239426

Mutations in the yeast RNA14 and RNA15 genes result in an abnormal mRNA decay rate; sequence analysis reveals an RNA-binding domain in the RNA15 protein

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=239426

The coat protein of the yeast double-stranded RNA virus L-A attaches covalently to the cap structure of eukaryotic mRNA.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=239426

Isolation and characterization of RAT1: an essential gene of Saccharomyces cerevisiae required for the efficient nucleocytoplasmic trafficking of mRNA

30 September 2017

1 reference

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Control of mRNA turnover as a mechanism of glucose repression in Saccharomyces cerevisiae

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=239426

Gene products that promote mRNA turnover in Saccharomyces cerevisiae

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=239426

Beta-globin nonsense mutation: deficient accumulation of mRNA occurs despite normal cytoplasmic stability

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=239426

Nonsense codons in human beta-globin mRNA result in the production of mRNA degradation products

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=239426

Early meiotic transcripts are highly unstable in Saccharomyces cerevisiae

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=239426

A mutation in the tRNA nucleotidyltransferase gene promotes stabilization of mRNAs in Saccharomyces cerevisiae

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=239426

Analysis of chimeric mRNAs derived from the STE3 mRNA identifies multiple regions within yeast mRNAs that modulate mRNA decay

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=239426

3'-UTR-dependent deadenylation by the yeast poly(A) nuclease

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=239426

Separation of factors required for cleavage and polyadenylation of yeast pre-mRNA

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=239426

The rate-limiting step in yeast PGK1 mRNA degradation is an endonucleolytic cleavage in the 3'-terminal part of the coding region

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=239426

Interference of nonsense mutations with eukaryotic messenger RNA stability

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=239426

Structure of polyadenylic acid in the ribonucleic acid of Saccharomyces cerevisiae

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=239426

Evidence for transcriptional regulation of orotidine-5'-phosphate decarboxylase in yeast by hybridization of mRNA to the yeast structural gene cloned in Escherichia coli

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=239426

An exoribonuclease from saccharomyces cerevisiae: Effect of modifications of 5′ end groups on the hydrolysis of substrates to 5′ mononucleotides

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=239426

The 5' untranslated region of the PPR1 regulatory gene dictates rapid mRNA decay in yeast

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=239426

Sequence-specific endonucleolytic cleavage and protection of mRNA in Xenopus and Drosophila

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=239426

Multiple elements in the c-fos protein-coding region facilitate mRNA deadenylation and decay by a mechanism coupled to translation

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=239426

Frameshift suppression Saccharomyces cerevisiae. II. Genetic properties of group II suppressors.

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=239426

High Stability of Messenger RNA in Growing Cultured Cells

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=239426

Translocation makes the ribosome less compact

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=239426

Removal of poly(A) and consequent degradation of c-fos mRNA facilitated by 3' AU-rich sequences

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=239426

Endonucleolytic cleavage of a maternal homeo box mRNA in Xenopus oocytes

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=239426

Two distinct destabilizing elements in the c-fos message trigger deadenylation as a first step in rapid mRNA decay

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=239426

Endonucleolysis in the turnover of insulin-like growth factor II mRNA.

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=239426

Mutations affecting stability and deadenylation of the yeast MFA2 transcript

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=239426

Translation initiation requires the PAB-dependent poly(A) ribonuclease in yeast

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=239426

Homology with Saccharomyces cerevisiae RNA14 suggests that phenotypic suppression in Drosophila melanogaster by suppressor of forked occurs at the level of RNA stability

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=239426

Inactivation of SSM4, a new Saccharomyces cerevisiae gene, suppresses mRNA instability due to rna14 mutations

20 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=239426

Multiple functions for the poly(A)-binding protein in mRNA decapping and deadenylation in yeast

20 September 2018

1 reference

12 December 2020

Length heterogeneity in the poly (adenylic acid) region of yeast messenger ribonucleic acid

1 reference

12 December 2020

X-ray fiber diffraction and model-building study of polyguanylic acid and polyinosinic acid

1 reference

12 December 2020

Compilation of small ribosomal subunit RNA sequences

1 reference

12 December 2020

The poly(A)-binding protein facilitates in vitro translation of poly(A)-rich mRNA

1 reference

12 December 2020

The c-fos transcript is targeted for rapid decay by two distinct mRNA degradation pathways

1 reference

12 December 2020

Conformational changes in ribosomes upon interaction with elongation factors

1 reference

12 December 2020

An mRNA decapping enzyme from ribosomes of Saccharomyces cerevisiae

1 reference

12 December 2020

Transcriptional regulation of the MET3 gene of Saccharomyces cerevisiae

1 reference

12 December 2020

A coding region segment is necessary, but not sufficient for rapid decay of the HIS3 mRNA in yeast

1 reference

12 December 2020

Structural dynamics of translating ribosomes

1 reference

12 December 2020

A 5' exoribonuclease from cytoplasmic extracts of mouse sarcoma 180 ascites cells

1 reference

12 December 2020

Unstable β-globin mRNA in mRNA-deficient β0 thalassemia

1 reference

12 December 2020

mRNA destabilization triggered by premature translational termination depends on at least three cis-acting sequence elements and one trans-acting factor

1 reference

12 December 2020

mRNA surveillance by the Caenorhabditis elegans smg genes

1 reference

12 December 2020

Differential effects of translational inhibition in cis and in trans on the decay of the unstable yeast MFA2 mRNA

1 reference

12 December 2020

The levels of yeast gluconeogenic mRNAs respond to environmental factors

1 reference

12 December 2020

RNA14 and RNA15 proteins as components of a yeast pre-mRNA 3'-end processing factor

1 reference

12 December 2020

Identification and characterization of genes that are required for the accelerated degradation of mRNAs containing a premature translational termination codon

1 reference

12 December 2020

Identifiers

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8852902%20AND%20SRC:MED&resulttype=core&format=json

20 October 2019

PubMed publication ID

8852902

1 reference