Complete genome sequence of the sulfate-reducing firmicute Desulfotomaculum ruminis type strain (DL(T)) (Q36601393)

15 August 2017

Complete genome sequence of the sulfate-reducing firmicute Desulfotomaculum ruminis type strain (DL(T)) (English)

1 reference

15 August 2017

0 references

0 references

Desulfotomaculum ruminis

Desulfotomaculum ruminis

1 reference

based on heuristic

inferred from title

whole genome sequencing

1 reference

1 reference

1

1 reference

15 August 2017

12

1 reference

15 August 2017

13

1 reference

15 August 2017

17

1 reference

15 August 2017

19

1 reference

15 August 2017

5

Alla Lapidus

0 references

Hans-Peter Klenk

29

Hans-Peter Klenk

0 references

Roxanne Tapia

9

Roxanne Tapia

0 references

Tanja Woyke

20

Tanja Woyke

0 references

Rizlan Bernier-Latmani

27

Rizlan Bernier-Latmani

0 references

Peter J. Schaap

Peter J Schaap

21

0 references

Gerard Muyzer

Gerard Muyzer

23

0 references

Sam Pitluck

11

Sam Pitluck

1 reference

15 August 2017

7

Jan-Fang Cheng

1 reference

15 August 2017

14

Loren Hauser

1 reference

15 August 2017

6

Susan Lucas

1 reference

15 August 2017

18

John C Detter

1 reference

15 August 2017

4

Alex Copeland

1 reference

15 August 2017

16

Manfred Rohde

1 reference

15 August 2017

15

Frank Larimer

1 reference

15 August 2017

2

Michael Visser

1 reference

15 August 2017

8

Cliff Han

1 reference

15 August 2017

22

Caroline M Plugge

1 reference

15 August 2017

24

Jan Kuever

1 reference

15 August 2017

26

Sofiya N Parshina

1 reference

15 August 2017

28

Alfons J M Stams

1 reference

15 August 2017

10

Lynne A Goodwin

1 reference

15 August 2017

Megan Lu

3

1 reference

PMCID

3569383

15 August 2017

Inês A C Pereira

25

1 reference

15 August 2017

11 December 2012

1 reference

Standards in genomic sciences

15 August 2017

1 reference

15 August 2017

7

1 reference

15 August 2017

2

1 reference

15 August 2017

304-319

1 reference

https://scigraph.springernature.com/pub.10.4056/sigs.3226659

15 August 2017

0 references

cites work

The DNA bank network: the start from a german initiative

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3569383

The Genomes OnLine Database (GOLD) v.4: status of genomic and metagenomic projects and their associated metadata

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3569383

SignalP 4.0: discriminating signal peptides from transmembrane regions

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3569383

A comparative genomic analysis of energy metabolism in sulfate reducing bacteria and archaea

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3569383

Complete genome sequence of Desulfotomaculum acetoxidans type strain (5575)

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3569383

Prodigal: prokaryotic gene recognition and translation initiation site identification

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3569383

A phylogeny-driven genomic encyclopaedia of Bacteria and Archaea

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3569383

Identification of the [FeFe]-hydrogenase responsible for hydrogen generation in Thermoanaerobacterium saccharolyticum and demonstration of increased ethanol yield via hydrogenase knockout.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3569383

IMG ER: a system for microbial genome annotation expert review and curation

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3569383

The Crystal Structure of Desulfovibrio vulgaris Dissimilatory Sulfite Reductase Bound to DsrC Provides Novel Insights into the Mechanism of Sulfate Respiration

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3569383

The minimum information about a genome sequence (MIGS) specification

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3569383

Velvet: algorithms for de novo short read assembly using de Bruijn graphs

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3569383

Occurrence, classification, and biological function of hydrogenases: an overview.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3569383

Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3569383

The reduction of sulphate in the rumen of the sheep

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3569383

A novel membrane-bound respiratory complex from Desulfovibrio desulfuricans ATCC 27774.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3569383

Carbon monoxide cycling by Desulfovibrio vulgaris Hildenborough

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3569383

Diversity and characterization of sulfate-reducing bacteria in groundwater at a uranium mill tailings site

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3569383

Gene ontology: tool for the unification of biology

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3569383

List of Bacterial Names with Standing in Nomenclature: a folder available on the Internet

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3569383

Classification of the spore-forming sulfate-reducing bacteria

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3569383

Basic local alignment search tool

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3569383

Towards a natural system of organisms: proposal for the domains Archaea, Bacteria, and Eucarya

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3569383

The Membrane QmoABC Complex Interacts Directly with the Dissimilatory Adenosine 5'-Phosphosulfate Reductase in Sulfate Reducing Bacteria.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3569383

The genome of the Gram-positive metal- and sulfate-reducing bacterium Desulfotomaculum reducens strain MI-1.

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3569383

Proposals Concerning the Higher Taxa of Bacteria

28 June 2018

1 reference

https://api.crossref.org/works/10.4056%2FSIGS.3226659

List of new names and new combinations previously effectively, but not validly, published

21 January 2018

1 reference

https://api.crossref.org/works/10.4056%2FSIGS.3226659

Approved Lists of Bacterial Names

21 January 2018

1 reference

https://api.crossref.org/works/10.4056%2FSIGS.3226659

Peptococcaceae, a New Family To Include the Gram-Positive, Anaerobic Cocci of the Genera Peptococcus, Peptostreptococcus, and Ruminococcus

21 January 2018

1 reference

https://api.crossref.org/works/10.4056%2FSIGS.3226659

GenePRIMP: a gene prediction improvement pipeline for prokaryotic genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.4056%2FSIGS.3226659

List of new names and new combinations previously effectively, but not validly, published

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3569383

Isolation and identification of anaerobic contaminants from a machine for producing processed cheese

20 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3569383

The hydrogenases of Geobacter sulfurreducens: a comparative genomic perspective

20 September 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23408247

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

A sulphate-reducing bacterium from the sheep rumen

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23408247

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.4056/SIGS.3226659

1 reference

PMCID

3569383

Dimensions Publication ID

15 August 2017

0 references

1 reference

15 August 2017

1 reference

PMCID

3569383