Highly cost-efficient genome-wide association studies using DNA pools and dense SNP arrays (Q36593761)

15 August 2017

Highly cost-efficient genome-wide association studies using DNA pools and dense SNP arrays (English)

1 reference

genome-wide association study

15 August 2017

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author

Peter M. Visscher

6

1 reference

15 August 2017

Anjali Henders

3

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Stuart Macgregor

object named as

Stuart Macgregor

1

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Grant W. Montgomery

object named as

Grant W Montgomery

5

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author name string

Zhen Zhen Zhao

2

1 reference

PMCID

2346606

15 August 2017

Martin G Nicholas

4

1 reference

PMCID

2346606

15 August 2017

language of work or name

English

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publication date

14 February 2008

1 reference

15 August 2017

Nucleic Acids Research

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15 August 2017

36

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15 August 2017

6

1 reference

15 August 2017

e35

1 reference

A genome-wide association study identifies novel risk loci for type 2 diabetes

15 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2346606

Identification of the genetic basis for complex disorders by use of pooling-based genomewide single-nucleotide-polymorphism association studies

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2346606

Novel genes identified in a high-density genome wide association study for nicotine dependence

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2346606

Common Kibra alleles are associated with human memory performance

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2346606

Genome-wide genotyping in Parkinson's disease and neurologically normal controls: first stage analysis and public release of data

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2346606

KRAS variation and risk of endometriosis

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2346606

Analysis of pooled DNA samples on high density arrays without prior knowledge of differential hybridization rates

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2346606

Two-stage designs in case-control association analysis

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2346606

Pooled DNA genotyping on Affymetrix SNP genotyping arrays

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2346606

Genotyping pooled DNA using 100K SNP microarrays: a step towards genomewide association scans

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2346606

Joint analysis is more efficient than replication-based analysis for two-stage genome-wide association studies

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2346606

PPC: an algorithm for accurate estimation of SNP allele frequencies in small equimolar pools of DNA using data from high density microarrays

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2346606

Identification of disease causing loci using an array-based genotyping approach on pooled DNA.

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2346606

Most pooling variation in array-based DNA pooling is attributable to array error rather than pool construction error.

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2346606

Genomic DNA pooling for whole-genome association scans in complex disease: empirical demonstration of efficacy in rheumatoid arthritis

20 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2346606

Two-stage designs for experiments with a large number of hypotheses.

20 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2346606

SNPs, microarrays and pooled DNA: identification of four loci associated with mild mental impairment in a sample of 6000 children.

20 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2346606

Genome-wide single nucleotide polymorphism analysis of lung cancer risk detects the KLF6 gene

20 September 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FNAR%2FGKM1060

Two-Stage Designs for Gene-Disease Association Studies

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FNAR%2FGKM1060

A Comparison of DNA Pools Constructed Following Whole Genome Amplification for Two-Stage SNP Genotyping Designs

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2346606

Design and Analysis of Association Studies using Pooled DNA from Large Twin Samples

4 December 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18276640

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/NAR/GKM1060

1 reference

15 August 2017

1 reference

15 August 2017

1 reference

PMCID

2346606