Chromatin remodelling in mammalian differentiation: lessons from ATP-dependent remodellers (Q36481551)

14 August 2017

title

Chromatin remodelling in mammalian differentiation: lessons from ATP-dependent remodellers (English)

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14 August 2017

Yasuyuki Ohkawa

2

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author name string

Ivana L de la Serna

series ordinal

1

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14 August 2017

Anthony N Imbalzano

series ordinal

3

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14 August 2017

publication date

1 June 2006

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14 August 2017

language of work or name

English

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published in

Nature Reviews Genetics

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14 August 2017

volume

7

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14 August 2017

issue

6

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14 August 2017

page(s)

461-473

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publication type of scholarly work

14 August 2017

review article

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The murine SNF5/INI1 chromatin remodeling factor is essential for embryonic development and tumor suppression

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Double chromodomains cooperate to recognize the methylated histone H3 tail

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Human but not yeast CHD1 binds directly and selectively to histone H3 methylated at lysine 4 via its tandem chromodomains

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Do protein motifs read the histone code?

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Structures of protein domains that create or recognize histone modifications

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ATP-dependent chromatin remodeling

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Altered control of cellular proliferation in the absence of mammalian brahma (SNF2alpha).

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A Brg1 null mutation in the mouse reveals functional differences among mammalian SWI/SNF complexes

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Disruption of Ini1 leads to peri-implantation lethality and tumorigenesis in mice

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Haploinsufficiency of Snf5 (integrase interactor 1) predisposes to malignant rhabdoid tumors in mice

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A Brg1 mutation that uncouples ATPase activity from chromatin remodeling reveals an essential role for SWI/SNF-related complexes in beta-globin expression and erythroid development

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Sequential roles of Brg, the ATPase subunit of BAF chromatin remodeling complexes, in thymocyte development

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Reciprocal regulation of CD4/CD8 expression by SWI/SNF-like BAF complexes

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The role of Brg1, a catalytic subunit of mammalian chromatin-remodeling complexes, in T cell development

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The chromatin remodeler Mi-2beta is required for CD4 expression and T cell development

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Srg3, a mouse homolog of yeast SWI3, is essential for early embryogenesis and involved in brain development

31 March 2020

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The SWI/SNF chromatin-remodeling complex subunit SNF5 is essential for hepatocyte differentiation

31 March 2020

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Baf60c is essential for function of BAF chromatin remodelling complexes in heart development

31 March 2020

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Polybromo protein BAF180 functions in mammalian cardiac chamber maturation

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A C/EBP beta isoform recruits the SWI/SNF complex to activate myeloid genes

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Dissecting the regulatory circuitry of a eukaryotic genome

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Whole-genome expression analysis of snf/swi mutants of Saccharomyces cerevisiae

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Establishment of an inducible expression system of chimeric MLL-LTG9 protein and inhibition of Hox a7, Hox b7 and Hox c9 expression by MLL-LTG9 in 32Dcl3 cells.

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The leukemogenic fusion of MLL with ENL creates a novel transcriptional transactivator

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The C-terminal SET domains of ALL-1 and TRITHORAX interact with the INI1 and SNR1 proteins, components of the SWI/SNF complex

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Novel SWI/SNF chromatin-remodeling complexes contain a mixed-lineage leukemia chromosomal translocation partner

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Targeting a SWI/SNF-related chromatin remodeling complex to the beta-globin promoter in erythroid cells

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Tissue-specific and developmental stage-specific DNA binding by a mammalian SWI/SNF complex associated with human fetal-to-adult globin gene switching

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An ikaros-containing chromatin-remodeling complex in adult-type erythroid cells

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Multiple hematopoietic defects and delayed globin switching in Ikaros null mice

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The ISWI ATPase Snf2h is required for early mouse development

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Notch1 confers a resistance to glucocorticoid-induced apoptosis on developing thymocytes by down-regulating SRG3 expression

31 March 2020

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Regulation of chromatin structure during thymic T cell development

31 March 2020

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Antigen receptor loci poised for V(D)J rearrangement are broadly associated with BRG1 and flanked by peaks of histone H3 dimethylated at lysine 4

31 March 2020

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ATP-dependent remodeling by SWI/SNF and ISWI proteins stimulates V(D)J cleavage of 5 S arrays

31 March 2020

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Rapid and phosphoinositol-dependent binding of the SWI/SNF-like BAF complex to chromatin after T lymphocyte receptor signaling

31 March 2020

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Nuclear inositides: facts and perspectives

31 March 2020

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Phosphatidylinositol-dependent actin filament binding by the SWI/SNF-like BAF chromatin remodeling complex

31 March 2020

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Tissue-specific nuclear architecture and gene expression regulated by SATB1

31 March 2020

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A tissue-specific MAR/SAR DNA-binding protein with unusual binding site recognition

31 March 2020

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SATB1 targets chromatin remodelling to regulate genes over long distances

31 March 2020

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Cooperation between C/EBPalpha TBP/TFIIB and SWI/SNF recruiting domains is required for adipocyte differentiation

31 March 2020

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Overexpression and ribozyme-mediated targeting of transcriptional coactivators CREB-binding protein and p300 revealed their indispensable roles in adipocyte differentiation through the regulation of peroxisome proliferator-activated receptor gamma

31 March 2020

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Temporal recruitment of transcription factors and SWI/SNF chromatin-remodeling enzymes during adipogenic induction of the peroxisome proliferator-activated receptor gamma nuclear hormone receptor

31 March 2020

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Coordination of PIC Assembly and Chromatin Remodeling During Differentiation-Induced Gene Activation

31 March 2020

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Ordered recruitment of chromatin modifying and general transcription factors to the IFN-beta promoter

31 March 2020

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Nucleosome sliding via TBP DNA binding in vivo

31 March 2020

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Facilitated binding of TATA-binding protein to nucleosomal DNA

31 March 2020

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The CCAAT enhancer-binding protein alpha (C/EBPalpha) requires a SWI/SNF complex for proliferation arrest

31 March 2020

1 reference

Aging reduces proliferative capacities of liver by switching pathways of C/EBPalpha growth arrest

31 March 2020

1 reference

Diversity and specialization of mammalian SWI/SNF complexes

31 March 2020

1 reference

Identification of a polymorphic, neuron-specific chromatin remodeling complex

31 March 2020

1 reference

The expression of the SWI/SNF ATPase subunits BRG1 and BRM in normal human tissues

31 March 2020

1 reference

Cloning and mapping of SMARCA5 encoding hSNF2H, a novel human homologue of Drosophila ISWI

31 March 2020

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Cloning of human and bovine homologs of SNF2/SWI2: a global activator of transcription in yeast S. cerevisiae

31 March 2020

1 reference

Cloning and characterization of the murine Imitation Switch (ISWI) genes: differential expression patterns suggest distinct developmental roles for Snf2h and Snf2l

31 March 2020

1 reference

CECR2, a protein involved in neurulation, forms a novel chromatin remodeling complex with SNF2L

31 March 2020

1 reference

Isolation of human NURF: a regulator of Engrailed gene expression

31 March 2020

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A small gem with great powers: geminin keeps neural progenitors thriving

31 March 2020

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Geminin regulates neuronal differentiation by antagonizing Brg1 activity

31 March 2020

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The SWI/SNF chromatin remodeling protein Brg1 is required for vertebrate neurogenesis and mediates transactivation of Ngn and NeuroD.

31 March 2020

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Chromatin remodeling in neural development and plasticity

31 March 2020

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REST repression of neuronal genes requires components of the hSWI.SNF complex

31 March 2020

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SWI/SNF complex is essential for NRSF-mediated suppression of neuronal genes in human nonsmall cell lung carcinoma cell lines

31 March 2020

1 reference

Pbx marks genes for activation by MyoD indicating a role for a homeodomain protein in establishing myogenic potential

31 March 2020

1 reference

Mammalian SWI/SNF complexes promote MyoD-mediated muscle differentiation

31 March 2020

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The myogenic basic helix-loop-helix family of transcription factors shows similar requirements for SWI/SNF chromatin remodeling enzymes during muscle differentiation in culture

31 March 2020

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MyoD targets chromatin remodeling complexes to the myogenin locus prior to forming a stable DNA-bound complex

31 March 2020

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MyoD can induce cell cycle arrest but not muscle differentiation in the presence of dominant negative SWI/SNF chromatin remodeling enzymes

31 March 2020

1 reference

p38 pathway targets SWI-SNF chromatin-remodeling complex to muscle-specific loci

31 March 2020

1 reference

An initial blueprint for myogenic differentiation

31 March 2020

1 reference

Global and gene-specific analyses show distinct roles for Myod and Myog at a common set of promoters

31 March 2020

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Skeletal muscle specification by myogenin and Mef2D via the SWI/SNF ATPase Brg1

31 March 2020

1 reference

A conserved motif N-terminal to the DNA-binding domains of myogenic bHLH transcription factors mediates cooperative DNA binding with pbx-Meis1/Prep1

31 March 2020

1 reference

Sequential chromatin immunoprecipitation from animal tissues

31 March 2020

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The language of covalent histone modifications

31 March 2020

1 reference

mSin3A/histone deacetylase 2- and PRMT5-containing Brg1 complex is involved in transcriptional repression of the Myc target gene cad

31 March 2020

1 reference

A methylation-mediator complex in hormone signaling

31 March 2020

1 reference

Cell cycle control of the yeast HO gene: cis- and trans-acting regulators

31 March 2020

1 reference

Five SWI genes are required for expression of the HO gene in yeast

31 March 2020

1 reference

Repression and activation by multiprotein complexes that alter chromatin structure

31 March 2020

1 reference

Amino acid substitutions in the structured domains of histones H3 and H4 partially relieve the requirement of the yeast SWI/SNF complex for transcription

31 March 2020

1 reference

A multisubunit complex containing the SWI1/ADR6, SWI2/SNF2, SWI3, SNF5, and SNF6 gene products isolated from yeast

31 March 2020

1 reference

Five SWI/SNF gene products are components of a large multisubunit complex required for transcriptional enhancement

31 March 2020

1 reference

Stimulation of GAL4 derivative binding to nucleosomal DNA by the yeast SWI/SNF complex

31 March 2020

1 reference

The Polycomb and trithorax group proteins of Drosophila: trans-regulators of homeotic gene function

31 March 2020

1 reference

The role of brahma and related proteins in transcription and development

31 March 2020

1 reference

brahma: a regulator of Drosophila homeotic genes structurally related to the yeast transcriptional activator SNF2/SWI2

31 March 2020

1 reference

BRG1 contains a conserved domain of the SWI2/SNF2 family necessary for normal mitotic growth and transcription

31 March 2020

1 reference

A human homologue of Saccharomyces cerevisiae SNF2/SWI2 and Drosophila brm genes potentiates transcriptional activation by the glucocorticoid receptor

31 March 2020

1 reference

Nucleosome disruption and enhancement of activator binding by a human SW1/SNF complex

31 March 2020

1 reference

The Drosophila BRM complex facilitates global transcription by RNA polymerase II

31 March 2020

1 reference

ISWI, a member of the SWI2/SNF2 ATPase family, encodes the 140 kDa subunit of the nucleosome remodeling factor

31 March 2020

1 reference

Isolation of cDNAs encoding chicken homologues of the yeast SNF2 and Drosophila Brahma proteins

31 March 2020

1 reference

The Arabidopsis thaliana SNF2 homolog AtBRM controls shoot development and flowering

31 March 2020

1 reference

ACF, an ISWI-Containing and ATP-Utilizing Chromatin Assembly and Remodeling Factor

31 March 2020

1 reference

Chromatin-remodelling factor CHRAC contains the ATPases ISWI and topoisomerase II.

31 March 2020

1 reference

Biological functions of the ISWI chromatin remodeling complex NURF.

31 March 2020

1 reference

The Drosophila nucleosome remodeling factor NURF is required for Ecdysteroid signaling and metamorphosis

31 March 2020

1 reference

The ISWI chromatin-remodeling protein is required for gene expression and the maintenance of higher order chromatin structure in vivo

31 March 2020

1 reference

Stem cell self-renewal controlled by chromatin remodeling factors

31 March 2020

1 reference

Multiple ISWI ATPase complexes from xenopus laevis. Functional conservation of an ACF/CHRAC homolog

31 March 2020

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WSTF-ISWI chromatin remodeling complex targets heterochromatic replication foci

31 March 2020

1 reference

An ACF1-ISWI chromatin-remodeling complex is required for DNA replication through heterochromatin

31 March 2020

1 reference

Neural and eye-specific defects associated with loss of the imitation switch (ISWI) chromatin remodeler in Xenopus laevis

31 March 2020

1 reference

dMi-2, a hunchback-interacting protein that functions in polycomb repression

31 March 2020

1 reference

PICKLE is a CHD3 chromatin-remodeling factor that regulates the transition from embryonic to vegetative development in Arabidopsis

31 March 2020

1 reference

NURD-complex genes antagonise Ras-induced vulval development in Caenorhabditis elegans

31 March 2020

1 reference

A multiple subunit Mi-2 histone deacetylase from Xenopus laevis cofractionates with an associated Snf2 superfamily ATPase

31 March 2020

1 reference

31 March 2020

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MEP-1 and a homolog of the NURD complex component Mi-2 act together to maintain germline-soma distinctions in C. elegans

31 March 2020

1 reference

Chromatin regulation during C. elegans germline development

31 March 2020

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31 March 2020

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Essential function of histone deacetylase 1 in proliferation control and CDK inhibitor repression

31 March 2020

1 reference

Evidence that SNF2/SWI2 and SNF5 activate transcription in yeast by altering chromatin structure

31 March 2020

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inferred from DOI database lookup

7 January 2021

based on heuristic

Identifiers

DOI

10.1038/NRG1882

1 reference

14 August 2017

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