PhosphoScan: a probability-based method for phosphorylation site prediction using MS2/MS3 pair information. (Q36458446)

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8 January 2020

title

PhosphoScan: a probability-based method for phosphorylation site prediction using MS2/MS3 pair information (English)

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8 January 2020

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3

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8 January 2020

author name string

Yunhu Wan

1

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8 January 2020

Diane Cripps

2

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8 January 2020

Patricia Campbell

4

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8 January 2020

Nicholas Ambulos

5

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Ting Chen

6

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Austin Yang

7

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publication date

13 June 2008

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Journal of Proteome Research

8 January 2020

published in

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volume

7

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issue

7

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8 January 2020

page(s)

2803-2811

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Investigating MS2/MS3 matching statistics: a model for coupling consecutive stage mass spectrometry data for increased peptide identification confidence

8 January 2020

cites work

1 reference

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Global, in vivo, and site-specific phosphorylation dynamics in signaling networks

30 September 2017

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A probability-based approach for high-throughput protein phosphorylation analysis and site localization

30 September 2017

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Phospho.ELM: a database of experimentally verified phosphorylation sites in eukaryotic proteins

30 September 2017

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PhosphoSite: A bioinformatics resource dedicated to physiological protein phosphorylation

30 September 2017

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Improving large-scale proteomics by clustering of mass spectrometry data.

30 September 2017

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30 September 2017

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Proteomic analysis of post-translational modifications

30 September 2017

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Probability-based protein identification by searching sequence databases using mass spectrometry data

30 September 2017

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Automatic validation of phosphopeptide identifications from tandem mass spectra

30 September 2017

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Probability-based validation of protein identifications using a modified SEQUEST algorithm

28 June 2018

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Alzheimer disease-specific conformation of hyperphosphorylated paired helical filament-Tau is polyubiquitinated through Lys-48, Lys-11, and Lys-6 ubiquitin conjugation.

28 June 2018

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PepHMM: a hidden Markov model based scoring function for mass spectrometry database search.

21 September 2018

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Phosphorylation analysis by mass spectrometry: myths, facts, and the consequences for qualitative and quantitative measurements

21 September 2018

1 reference

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De novo peptide sequencing by two-dimensional fragment correlation mass spectrometry

21 September 2018

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Alz-50 and MC-1, a new monoclonal antibody raised to paired helical filaments, recognize conformational epitopes on recombinant tau.

21 September 2018

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21 September 2018

Identifiers

DOI

10.1021/PR700773P

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8 January 2020

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8 January 2020

PubMed publication ID

18549264

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