Using high-throughput SNP technologies to study cancer (Q36426758)

14 August 2017

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title

Using high-throughput SNP technologies to study cancer (English)

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14 August 2017

Engle LJ

1

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14 August 2017

Simpson CL

series ordinal

2

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14 August 2017

Landers JE

series ordinal

3

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14 August 2017

language of work or name

English

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publication date

1 March 2006

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14 August 2017

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14 August 2017

25

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14 August 2017

11

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14 August 2017

1594-1601

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https://scigraph.springernature.com/pub.10.1038/sj.onc.1209368

14 August 2017

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cites work

Allelic imbalance analysis by high-density single-nucleotide polymorphic allele (SNP) array with whole genome amplified DNA.

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https://api.crossref.org/works/10.1038%2FSJ.ONC.1209368

Beyond Mendel: an evolving view of human genetic disease transmission

21 January 2018

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7 January 2021

Discovering genotypes underlying human phenotypes: past successes for mendelian disease, future approaches for complex disease

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https://api.crossref.org/works/10.1038%2FSJ.ONC.1209368

7 January 2021

Characterization of single-nucleotide polymorphisms in coding regions of human genes

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https://api.crossref.org/works/10.1038%2FSJ.ONC.1209368

7 January 2021

Selecting a maximally informative set of single-nucleotide polymorphisms for association analyses using linkage disequilibrium

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https://api.crossref.org/works/10.1038%2FSJ.ONC.1209368

7 January 2021

One-carbon metabolism, MTHFR polymorphisms, and risk of breast cancer

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https://api.crossref.org/works/10.1038%2FSJ.ONC.1209368

7 January 2021

Altered expression and loss of heterozygosity of the LOT1 gene in ovarian cancer

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https://api.crossref.org/works/10.1038%2FSJ.ONC.1209368

7 January 2021

Comprehensive human genome amplification using multiple displacement amplification

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https://api.crossref.org/works/10.1038%2FSJ.ONC.1209368

7 January 2021

SNP association studies in Alzheimer's disease highlight problems for complex disease analysis.

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https://api.crossref.org/works/10.1038%2FSJ.ONC.1209368

7 January 2021

Common variation in BRCA2 and breast cancer risk: a haplotype-based analysis in the Multiethnic Cohort

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https://api.crossref.org/works/10.1038%2FSJ.ONC.1209368

7 January 2021

A haplotype-based case-control study of BRCA1 and sporadic breast cancer risk

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https://api.crossref.org/works/10.1038%2FSJ.ONC.1209368

7 January 2021

Integrative genomic analyses identify MITF as a lineage survival oncogene amplified in malignant melanoma

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https://api.crossref.org/works/10.1038%2FSJ.ONC.1209368

7 January 2021

Haplotype-based identification of a microsomal transfer protein marker associated with the human lifespan

1 reference

https://api.crossref.org/works/10.1038%2FSJ.ONC.1209368

7 January 2021

Association of the C677T polymorphism in the MTHFR gene with breast and/or ovarian cancer risk in Jewish women

1 reference

https://api.crossref.org/works/10.1038%2FSJ.ONC.1209368

7 January 2021

Mutations in VPS33B, encoding a regulator of SNARE-dependent membrane fusion, cause arthrogryposis-renal dysfunction-cholestasis (ARC) syndrome

1 reference

https://api.crossref.org/works/10.1038%2FSJ.ONC.1209368

7 January 2021

Methylenetetrahydrofolate reductase 677C/T gene polymorphism, gastric cancer susceptibility and genomic DNA hypomethylation in an at-risk Italian population.

1 reference

https://api.crossref.org/works/10.1038%2FSJ.ONC.1209368

7 January 2021

A genome-wide scalable SNP genotyping assay using microarray technology

1 reference

https://api.crossref.org/works/10.1038%2FSJ.ONC.1209368

7 January 2021

A comprehensive haplotype analysis of CYP19 and breast cancer risk: the Multiethnic Cohort

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https://api.crossref.org/works/10.1038%2FSJ.ONC.1209368

7 January 2021

Optimal haplotype block-free selection of tagging SNPs for genome-wide association studies

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https://api.crossref.org/works/10.1038%2FSJ.ONC.1209368

7 January 2021

Polymorphisms in DNA double-strand break repair genes and skin cancer risk

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https://api.crossref.org/works/10.1038%2FSJ.ONC.1209368

7 January 2021

Genetic variation in XRCC1, sun exposure, and risk of skin cancer

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https://api.crossref.org/works/10.1038%2FSJ.ONC.1209368

7 January 2021

Identification of genetic variants in base excision repair pathway and their associations with risk of esophageal squamous cell carcinoma

1 reference

https://api.crossref.org/works/10.1038%2FSJ.ONC.1209368

7 January 2021

High-resolution analysis of chromosomal imbalances using the Affymetrix 10K SNP genotyping chip.

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https://api.crossref.org/works/10.1038%2FSJ.ONC.1209368

7 January 2021

Matching strategies for genetic association studies in structured populations

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https://api.crossref.org/works/10.1038%2FSJ.ONC.1209368

7 January 2021

Genome-wide association study in esophageal cancer using GeneChip mapping 10K array

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https://api.crossref.org/works/10.1038%2FSJ.ONC.1209368

7 January 2021

Functional polymorphisms of matrix metalloproteinase-9 are associated with risk of occurrence and metastasis of lung cancer.

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https://api.crossref.org/works/10.1038%2FSJ.ONC.1209368

7 January 2021

Whole genome DNA copy number changes identified by high density oligonucleotide arrays

1 reference

https://api.crossref.org/works/10.1038%2FSJ.ONC.1209368

7 January 2021

Loss of heterozygosity in childhood acute lymphoblastic leukemia detected by genome-wide microarray single nucleotide polymorphism analysis.

1 reference

https://api.crossref.org/works/10.1038%2FSJ.ONC.1209368

7 January 2021

Allelic dosage analysis with genotyping microarrays.

1 reference

https://api.crossref.org/works/10.1038%2FSJ.ONC.1209368

7 January 2021

Susceptibility genes for age-related maculopathy on chromosome 10q26

1 reference

https://api.crossref.org/works/10.1038%2FSJ.ONC.1209368

7 January 2021

Mutations in RDH12 encoding a photoreceptor cell retinol dehydrogenase cause childhood-onset severe retinal dystrophy

1 reference

https://api.crossref.org/works/10.1038%2FSJ.ONC.1209368

7 January 2021

High-resolution single-nucleotide polymorphism array and clustering analysis of loss of heterozygosity in human lung cancer cell lines

1 reference

https://api.crossref.org/works/10.1038%2FSJ.ONC.1209368

7 January 2021

Diets, polymorphisms of methylenetetrahydrofolate reductase, and the susceptibility of colon cancer and rectal cancer.

1 reference

https://api.crossref.org/works/10.1038%2FSJ.ONC.1209368

7 January 2021

Whole-genome scan, in a complex disease, using 11,245 single-nucleotide polymorphisms: comparison with microsatellites

1 reference

https://api.crossref.org/works/10.1038%2FSJ.ONC.1209368

7 January 2021

Genome complexity reduction for SNP genotyping analysis

1 reference

https://api.crossref.org/works/10.1038%2FSJ.ONC.1209368

7 January 2021

TP53BP2 locus is associated with gastric cancer susceptibility

1 reference

https://api.crossref.org/works/10.1038%2FSJ.ONC.1209368

7 January 2021

Large-scale genotyping of complex DNA.

1 reference

https://api.crossref.org/works/10.1038%2FSJ.ONC.1209368

7 January 2021

Complement factor H polymorphism in age-related macular degeneration

1 reference

https://api.crossref.org/works/10.1038%2FSJ.ONC.1209368

7 January 2021

Genetic polymorphisms of methylenetetrahydrofolate reductase and colorectal cancer and adenoma

1 reference

https://api.crossref.org/works/10.1038%2FSJ.ONC.1209368

7 January 2021

Frequent loss of the AXIN1 locus but absence of AXIN1 gene mutations in adenocarcinomas of the gastro-oesophageal junction with nuclear beta-catenin expression

1 reference

https://api.crossref.org/works/10.1038%2FSJ.ONC.1209368

7 January 2021

Role of MTHFR genetic polymorphisms in the susceptibility to childhood acute lymphoblastic leukemia

1 reference

https://api.crossref.org/works/10.1038%2FSJ.ONC.1209368

7 January 2021

A Ligase-Mediated Gene Detection Technique

1 reference

https://api.crossref.org/works/10.1038%2FSJ.ONC.1209368

7 January 2021

5,10-Methylenetetrahydrofolate reductase polymorphisms and the risk of pancreatic cancer

1 reference

https://api.crossref.org/works/10.1038%2FSJ.ONC.1209368

7 January 2021

dChipSNP: significance curve and clustering of SNP-array-based loss-of-heterozygosity data

1 reference

https://api.crossref.org/works/10.1038%2FSJ.ONC.1209368

7 January 2021

Interleukin-1 receptor antagonist haplotype associated with prostate cancer risk

1 reference

https://api.crossref.org/works/10.1038%2FSJ.ONC.1209368

7 January 2021

Allelic discrimination using fluorogenic probes and the 5' nuclease assay

1 reference

https://api.crossref.org/works/10.1038%2FSJ.ONC.1209368

7 January 2021

Oligonucleotides with fluorescent dyes at opposite ends provide a quenched probe system useful for detecting PCR product and nucleic acid hybridization

1 reference

https://api.crossref.org/works/10.1038%2FSJ.ONC.1209368

7 January 2021

Comprehensive evaluation of the association between prostate cancer and genotypes/haplotypes in CYP17A1, CYP3A4, and SRD5A2.

1 reference

https://api.crossref.org/works/10.1038%2FSJ.ONC.1209368

7 January 2021

Genomic alterations in cultured human embryonic stem cells

1 reference

https://api.crossref.org/works/10.1038%2FSJ.ONC.1209368

7 January 2021

Region-specific detection of neuroblastoma loss of heterozygosity at multiple loci simultaneously using a SNP-based tag-array platform

1 reference

https://api.crossref.org/works/10.1038%2FSJ.ONC.1209368

7 January 2021

Parallel genotyping of over 10,000 SNPs using a one-primer assay on a high-density oligonucleotide array

1 reference

https://api.crossref.org/works/10.1038%2FSJ.ONC.1209368

7 January 2021

Mutations in MRAP, encoding a new interacting partner of the ACTH receptor, cause familial glucocorticoid deficiency type 2

1 reference

https://api.crossref.org/works/10.1038%2FSJ.ONC.1209368

7 January 2021

The PANTHER database of protein families, subfamilies, functions and pathways

1 reference

https://api.crossref.org/works/10.1038%2FSJ.ONC.1209368

7 January 2021

Genomewide linkage analysis of bipolar disorder by use of a high-density single-nucleotide-polymorphism (SNP) genotyping assay: a comparison with microsatellite marker assays and finding of significant linkage to chromosome 6q22.

1 reference

https://api.crossref.org/works/10.1038%2FSJ.ONC.1209368

7 January 2021

A highly informative SNP linkage panel for human genetic studies.

1 reference

https://api.crossref.org/works/10.1038%2FSJ.ONC.1209368

7 January 2021

Genetic Bit Analysis: a solid phase method for typing single nucleotide polymorphisms

1 reference

https://api.crossref.org/works/10.1038%2FSJ.ONC.1209368

7 January 2021

Human thiopurine methyltransferase pharmacogenetics: gene sequence polymorphisms

1 reference

https://api.crossref.org/works/10.1038%2FSJ.ONC.1209368

7 January 2021

Functional SNPs in the lymphotoxin-alpha gene that are associated with susceptibility to myocardial infarction

1 reference

https://api.crossref.org/works/10.1038%2FSJ.ONC.1209368

7 January 2021

SNP500Cancer: a public resource for sequence validation and assay development for genetic variation in candidate genes

1 reference

https://api.crossref.org/works/10.1038%2FSJ.ONC.1209368

7 January 2021

Mapping of sudden infant death with dysgenesis of the testes syndrome (SIDDT) by a SNP genome scan and identification of TSPYL loss of function

1 reference

https://api.crossref.org/works/10.1038%2FSJ.ONC.1209368

7 January 2021

SNPeffect: a database mapping molecular phenotypic effects of human non-synonymous coding SNPs

1 reference

https://api.crossref.org/works/10.1038%2FSJ.ONC.1209368

7 January 2021

Genetic analysis of susceptibility to endometrial adenocarcinoma in the BDII rat model

1 reference

https://api.crossref.org/works/10.1038%2FSJ.ONC.1209368

7 January 2021

An atypical form of erythrokeratodermia variabilis maps to chromosome 7q22.

1 reference

https://api.crossref.org/works/10.1038%2FSJ.ONC.1209368

7 January 2021

A high-density screen for linkage in multiple sclerosis

1 reference

https://api.crossref.org/works/10.1038%2FSJ.ONC.1209368

7 January 2021

Enhancing linkage analysis of complex disorders: an evaluation of high-density genotyping

1 reference

https://api.crossref.org/works/10.1038%2FSJ.ONC.1209368

7 January 2021

Comparison of microsatellites versus single-nucleotide polymorphisms in a genome linkage screen for prostate cancer-susceptibility Loci

1 reference

https://api.crossref.org/works/10.1038%2FSJ.ONC.1209368

7 January 2021

A Novel Gene for Neonatal Diabetes Maps to Chromosome 10p12.1-p13

1 reference

https://api.crossref.org/works/10.1038%2FSJ.ONC.1209368

7 January 2021

Genetic alterations in bronchial mucosa and plasma DNA from individuals at high risk of lung cancer.

1 reference

https://api.crossref.org/works/10.1038%2FSJ.ONC.1209368

7 January 2021

A HOX gene mutation in a family with isolated congenital vertical talus and Charcot-Marie-Tooth disease

1 reference

https://api.crossref.org/works/10.1038%2FSJ.ONC.1209368

7 January 2021

Thiopurine methyltransferase (TPMT) genotype and early treatment response to mercaptopurine in childhood acute lymphoblastic leukemia

1 reference

https://api.crossref.org/works/10.1038%2FSJ.ONC.1209368

7 January 2021

Investigation of loss of heterozygosity and SNP frequencies in the RET gene in papillary thyroid carcinoma.

1 reference

https://api.crossref.org/works/10.1038%2FSJ.ONC.1209368

7 January 2021

Sequence Variants in Toll-Like Receptor Gene Cluster (TLR6-TLR1-TLR10) and Prostate Cancer Risk

1 reference

https://api.crossref.org/works/10.1038%2FSJ.ONC.1209368

7 January 2021

Genomewide single nucleotide polymorphism microarray mapping in basal cell carcinomas unveils uniparental disomy as a key somatic event.

1 reference

https://api.crossref.org/works/10.1038%2FSJ.ONC.1209368

7 January 2021

Whole genome SNP arrays using DNA derived from formalin-fixed, paraffin-embedded ovarian tumor tissue

1 reference

https://api.crossref.org/works/10.1038%2FSJ.ONC.1209368

7 January 2021

Mutations in the gene encoding gap junction protein alpha 12 (connexin 46.6) cause Pelizaeus-Merzbacher-like disease

1 reference

https://api.crossref.org/works/10.1038%2FSJ.ONC.1209368

7 January 2021

Genomic profiling maps loss of heterozygosity and defines the timing and stage dependence of epigenetic and genetic events in Wilms' tumors.

1 reference

https://api.crossref.org/works/10.1038%2FSJ.ONC.1209368

7 January 2021

Whole genome amplification from a single cell: implications for genetic analysis

1 reference

https://api.crossref.org/works/10.1038%2FSJ.ONC.1209368

7 January 2021

An integrated view of copy number and allelic alterations in the cancer genome using single nucleotide polymorphism arrays

1 reference

https://api.crossref.org/works/10.1038%2FSJ.ONC.1209368

7 January 2021

Concurrent analysis of loss of heterozygosity (LOH) and copy number abnormality (CNA) for oral premalignancy progression using the Affymetrix 10K SNP mapping array

1 reference

https://api.crossref.org/works/10.1038%2FSJ.ONC.1209368

7 January 2021

Identifiers

DOI

10.1038/SJ.ONC.1209368

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release_jllwfulhm5f5pnlce5ugsq6wae

14 August 2017

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24 November 2022

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