Denaturation of RNA secondary and tertiary structure by urea: simple unfolded state models and free energy parameters account for measured m-values (Q36419990)

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English	Denaturation of RNA secondary and tertiary structure by urea: simple unfolded state models and free energy parameters account for measured m-values	scientific article

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scholarly article

1 reference

Europe PubMed Central

PMC publication ID

14 August 2017

Denaturation of RNA secondary and tertiary structure by urea: simple unfolded state models and free energy parameters account for measured m-values (English)

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Europe PubMed Central

PMC publication ID

14 August 2017

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based on heuristic

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author name string

Dominic Lambert

1

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Europe PubMed Central

PMC publication ID

14 August 2017

David E Draper

2

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Europe PubMed Central

PMC publication ID

14 August 2017

language of work or name

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publication date

29 October 2012

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Europe PubMed Central

PMC publication ID

14 August 2017

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Europe PubMed Central

PMC publication ID

14 August 2017

51

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Europe PubMed Central

PMC publication ID

14 August 2017

44

1 reference

Europe PubMed Central

PMC publication ID

14 August 2017

9014-9026

1 reference

Europe PubMed Central

PMC publication ID

14 August 2017

Quantifying why urea is a protein denaturant, whereas glycine betaine is a protein stabilizer

1 reference

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Effects of Mg2+ on the free energy landscape for folding a purine riboswitch RNA.

1 reference

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1 reference

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The osmolyte TMAO stabilizes native RNA tertiary structures in the absence of Mg2+: evidence for a large barrier to folding from phosphate dehydration

1 reference

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Free State Conformational Sampling of the SAM-I Riboswitch Aptamer Domain

1 reference

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Dependence of RNA tertiary structural stability on Mg2+ concentration: interpretation of the Hill equation and coefficient

1 reference

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1 reference

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Urea destabilizes RNA by forming stacking interactions and multiple hydrogen bonds with nucleic acid bases

1 reference

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1 reference

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Mutational Analysis of the Purine Riboswitch Aptamer Domain †

1 reference

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1 reference

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1 reference

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1 reference

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Structural basis for discriminative regulation of gene expression by adenine- and guanine-sensing mRNAs

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1 reference

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1 reference

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1 reference

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1 reference

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The interaction of nucleosides in aqueous solution

1 reference

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Solution studies of the nucleic acid bases and related model compounds. Solubility in aqueous urea and amide solutions

1 reference

https://pubmed.ncbi.nlm.nih.gov/23088364

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Solvent-accessible surfaces of nucleic acids

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Base-stacking and base-pairing contributions to helix stability: thermodynamics of double-helix formation with CCGG, CCGGp, CCGGAp, ACCGGp, CCGGUp, and ACCGGUp

1 reference

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Stability and Properties of Double and Triple Helices: Dramatic Effects of RNA or DNA Backbone Composition

1 reference

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The peptide backbone plays a dominant role in protein stabilization by naturally occurring osmolytes

1 reference

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Modeling unfolded states of peptides and proteins

1 reference

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Modeling unfolded states of proteins and peptides. II. Backbone solvent accessibility

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THE SOLUBILITY OF AMINO ACIDS AND RELATED COMPOUNDS IN AQUEOUS UREA SOLUTIONS

1 reference

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Applicability of urea in the thermodynamic analysis of secondary and tertiary RNA folding

1 reference

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Identifiers

10.1021/BI301103J

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Europe PubMed Central

PMC publication ID

14 August 2017

release_w6iq3kl3qbe4hn7dbt3rdlcg3i

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24 November 2022

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PMC publication ID

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Europe PubMed Central

PMC publication ID

14 August 2017

PubMed publication ID

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Europe PubMed Central

PMC publication ID

14 August 2017

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