Beyond Mfold: recent advances in RNA bioinformatics (Q36418508)

14 August 2017

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8 April 2021

Beyond Mfold: recent advances in RNA bioinformatics (English)

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14 August 2017

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computational biology

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8 April 2021

Björn Voss

4

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Robert Giegerich

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5

object named as

Robert Giegerich

1 reference

14 August 2017

Jens Reeder

1

1 reference

14 August 2017

Matthias Höchsmann

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2

1 reference

14 August 2017

Marc Rehmsmeier

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3

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14 August 2017

10 March 2006

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14 August 2017

25 June 2006

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8 April 2021

Journal of Biotechnology

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14 August 2017

8 April 2021

124

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14 August 2017

41-55

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14 August 2017

1

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Fast and effective prediction of microRNA/target duplexes

14 August 2017

1 reference

12 December 2020

On the complexity of multiple sequence alignment

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12 December 2020

Secondary structure prediction of interacting RNA molecules.

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12 December 2020

A comprehensive comparison of comparative RNA structure prediction approaches

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12 December 2020

Dynalign: an algorithm for finding the secondary structure common to two RNA sequences

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12 December 2020

Finding the most significant common sequence and structure motifs in a set of RNA sequences

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12 December 2020

Abstract shapes of RNA

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12 December 2020

Expanded sequence dependence of thermodynamic parameters improves prediction of RNA secondary structure

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12 December 2020

Identifying constraints on the higher-order structure of RNA: continued development and application of comparative sequence analysis methods

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12 December 2020

An RNA folding method capable of identifying pseudoknots and base triples.

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12 December 2020

Evaluation of the suitability of free-energy minimization using nearest-neighbor energy parameters for RNA secondary structure prediction

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12 December 2020

A three-stemmed mRNA pseudoknot in the SARS coronavirus frameshift signal

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12 December 2020

The equilibrium partition function and base pair binding probabilities for RNA secondary structure

1 reference

12 December 2020

Identification of Drosophila MicroRNA targets

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12 December 2020

RNA secondary structure prediction by centroids in a Boltzmann weighted ensemble

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12 December 2020

Rfam: an RNA family database

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12 December 2020

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12 December 2020

Vienna RNA secondary structure server

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12 December 2020

Optimal computer folding of large RNA sequences using thermodynamics and auxiliary information

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12 December 2020

RNA pseudoknot prediction in energy-based models

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12 December 2020

A statistical sampling algorithm for RNA secondary structure prediction

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12 December 2020

A heuristic approach for detecting RNA H-type pseudoknots.

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12 December 2020

Design, implementation and evaluation of a practical pseudoknot folding algorithm based on thermodynamics

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12 December 2020

Consensus shapes: an alternative to the Sankoff algorithm for RNA consensus structure prediction

1 reference

12 December 2020

Pure multiple RNA secondary structure alignments: a progressive profile approach

1 reference

12 December 2020

A dynamic programming algorithm for RNA structure prediction including pseudoknots

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12 December 2020

Complete suboptimal folding of RNA and the stability of secondary structures.

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12 December 2020

10.1016/J.JBIOTEC.2006.01.034

Identifiers

DOI

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14 August 2017

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